EnhancerDB
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  3. vista53818[chr6:139577047-139577438]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53818[chr6:139577047-139577438]
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Tissue distribution of vista53818
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Transcription factor that possibly regulate vista53818[chr6:139577047-139577438]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 139577047 139577062 FOXP1 JASPAR yes 70450119
chr6 139577048 139577063 FOXP1 JASPAR yes 70450120
chr6 139577048 139577069 IRF1 JASPAR yes 70450121
chr6 139577049 139577064 FOXP1 JASPAR yes 70450122
chr6 139577052 139577067 STAT2 JASPAR yes 70450123
chr6 139577054 139577075 IRF1 JASPAR yes 70450124
chr6 139577057 139577071 ONECUT3 JASPAR yes 70450125
chr6 139577058 139577070 IRF1 JASPAR yes 70450126
chr6 139577060 139577075 MEF2C JASPAR yes 70450127
chr6 139577061 139577076 MEF2A JASPAR yes 70450128
chr6 139577062 139577074 MEF2B JASPAR yes 70450129
chr6 139577147 139577163 ZNF143 JASPAR yes 70450130
chr6 139577151 139577168 ESR1 JASPAR yes 70450131
chr6 139577151 139577169 ESR2 JASPAR yes 70450132
chr6 139577169 139577175 YY1 JASPAR yes 70450133
chr6 139577179 139577194 HNF4A JASPAR yes 70450134
chr6 139577191 139577210 PAX5 JASPAR yes 70450135
chr6 139577193 139577197 LFA1 TRANSFAC yes 70450136
chr6 139577212 139577216 YY1 TRANSFAC yes 70450137
chr6 139577218 139577224 TBP TRANSFAC yes 70450138
chr6 139577218 139577229 FOXC1 JASPAR yes 70450139
chr6 139577218 139577230 FOXC2 JASPAR yes 70450140
chr6 139577220 139577235 FOXP1 JASPAR yes 70450141
chr6 139577221 139577242 IRF1 JASPAR yes 70450142
chr6 139577225 139577246 IRF1 JASPAR yes 70450143
chr6 139577226 139577241 FOXP1 JASPAR yes 70450144
chr6 139577227 139577242 IRF9 JASPAR yes 70450145
chr6 139577228 139577242 IRF7 JASPAR yes 70450146
chr6 139577228 139577242 IRF8 JASPAR yes 70450147
chr6 139577229 139577243 STAT1 JASPAR yes 70450148
chr6 139577229 139577244 PRDM1 JASPAR yes 70450149
chr6 139577229 139577244 STAT2 JASPAR yes 70450150
chr6 139577242 139577253 FOXC1 JASPAR yes 70450151
chr6 139577242 139577254 FOXC2 JASPAR yes 70450152
chr6 139577249 139577257 DLX6 JASPAR yes 70450153
chr6 139577249 139577257 MSX2 JASPAR yes 70450154
chr6 139577259 139577265 TBP TRANSFAC yes 70450155
chr6 139577275 139577289 RXRG JASPAR yes 70450156
chr6 139577280 139577284 TEAD2 TRANSFAC yes 70450157
chr6 139577280 139577285 TBP TRANSFAC yes 70450158
chr6 139577294 139577305 HOXA10 JASPAR yes 70450159
chr6 139577295 139577305 HOXD13 JASPAR yes 70450160
chr6 139577299 139577305 TBP TRANSFAC yes 70450161
chr6 139577322 139577333 BATF JASPAR yes 70450162
chr6 139577324 139577335 FOS JASPAR yes 70450163
chr6 139577324 139577335 JUND JASPAR yes 70450164
chr6 139577325 139577336 JUNB JASPAR yes 70450165
chr6 139577326 139577332 JUN TRANSFAC yes 70450166
chr6 139577344 139577358 E2F7 JASPAR yes 70450167
chr6 139577352 139577365 HSF2 JASPAR yes 70450168
chr6 139577356 139577371 HSF1 JASPAR yes 70450169
chr6 139577357 139577370 HSF1 JASPAR yes 70450170
chr6 139577357 139577370 HSF2 JASPAR yes 70450171
chr6 139577357 139577370 HSF4 JASPAR yes 70450172
chr6 139577384 139577396 PBX1 JASPAR yes 70450173
chr6 139577413 139577428 HSF1 JASPAR yes 70450174
chr6 139577424 139577430 MZF1 JASPAR yes 70450175
SNP sites on vista53818[chr6:139577047-139577438]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 139577049 rs139954875 GAAA G
FOXP1 IRF1
9382117
chr6 139577054 rs544887038 A G
FOXP1 IRF1 STAT2
9382118
chr6 139577064 rs546326970 C A
FOXP1 IRF1 MEF2A MEF2B MEF2C ONECUT3 STAT2
9382119
chr6 139577200 rs546428222 T C
PAX5
9382120
chr6 139577288 rs566187850 T C
RXRG
9382121
chr6 139577344 rs139512868 A T
E2F7
9382122
chr6 139577358 rs72990505 T G
E2F7 HSF1 HSF2 HSF4
9382123
Genes possibly regulated by vista53818[chr6:139577047-139577438]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 139561198 139613276 - TXLNB ENSG00000164440.10 139613276 0.95 0.94 7003 64162
Expression level of Genes
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miRNAs possibly regulated by vista53818[chr6:139577047-139577438]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results