EnhancerDB
  1. Home
  2. Enhancers
  3. vista53819[chr6:139578405-139578747]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53819[chr6:139578405-139578747]
Back to top
Tissue distribution of vista53819
Back to top
Transcription factor that possibly regulate vista53819[chr6:139578405-139578747]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 139578409 139578419 NFATC3 JASPAR yes 70450176
chr6 139578410 139578417 NFATC2 JASPAR yes 70450177
chr6 139578415 139578425 ETV6 JASPAR yes 70450178
chr6 139578430 139578439 CDX1 JASPAR yes 70450179
chr6 139578430 139578441 CDX2 JASPAR yes 70450180
chr6 139578453 139578460 MEIS1 JASPAR yes 70450181
chr6 139578453 139578466 ZBTB18 JASPAR yes 70450182
chr6 139578455 139578465 MYF6 JASPAR yes 70450183
chr6 139578457 139578462 MYC TRANSFAC yes 70450184
chr6 139578471 139578475 YY1 TRANSFAC yes 70450185
chr6 139578481 139578485 YY1 TRANSFAC yes 70450186
chr6 139578491 139578497 TCF1 TRANSFAC yes 70450187
chr6 139578491 139578498 TCF4 TRANSFAC yes 70450188
chr6 139578506 139578520 POU1F1 JASPAR yes 70450189
chr6 139578507 139578519 POU3F1 JASPAR yes 70450190
chr6 139578507 139578519 POU3F2 JASPAR yes 70450191
chr6 139578507 139578520 POU3F3 JASPAR yes 70450192
chr6 139578523 139578537 IRF7 JASPAR yes 70450193
chr6 139578525 139578531 TCF4 TRANSFAC yes 70450194
chr6 139578525 139578540 FOXP1 JASPAR yes 70450195
chr6 139578526 139578535 SRY JASPAR yes 70450196
chr6 139578526 139578537 FOXP2 JASPAR yes 70450197
chr6 139578526 139578538 FOXC2 JASPAR yes 70450198
chr6 139578527 139578538 FOXC1 JASPAR yes 70450199
chr6 139578528 139578536 FOXO3 JASPAR yes 70450200
chr6 139578535 139578542 NKX3-1 JASPAR yes 70450201
chr6 139578542 139578546 YY1 TRANSFAC yes 70450202
chr6 139578542 139578555 ATF4 JASPAR yes 70450203
chr6 139578543 139578556 JUN JASPAR yes 70450204
chr6 139578552 139578564 DBP JASPAR yes 70450205
chr6 139578552 139578564 HLF JASPAR yes 70450206
chr6 139578554 139578565 NFIL3 JASPAR yes 70450207
chr6 139578559 139578562 MYB TRANSFAC yes 70450208
chr6 139578560 139578571 SPDEF JASPAR yes 70450209
chr6 139578562 139578575 SCRT2 JASPAR yes 70450210
chr6 139578567 139578578 FOXH1 JASPAR yes 70450211
chr6 139578612 139578618 TCF4 TRANSFAC yes 70450212
chr6 139578613 139578631 MAFF JASPAR yes 70450213
chr6 139578615 139578630 MAFK JASPAR yes 70450214
chr6 139578646 139578660 RORA JASPAR yes 70450215
chr6 139578647 139578665 E2F3 JASPAR yes 70450216
chr6 139578654 139578658 LFA1 TRANSFAC yes 70450217
chr6 139578681 139578691 SP1 JASPAR yes 70450218
chr6 139578681 139578699 ESR1 JASPAR yes 70450219
chr6 139578701 139578712 NRL JASPAR yes 70450220
chr6 139578711 139578720 HIC2 JASPAR yes 70450221
chr6 139578714 139578718 LFA1 TRANSFAC yes 70450222
chr6 139578721 139578725 ESR1 TRANSFAC yes 70450223
chr6 139578736 139578747 FOXA1 JASPAR yes 70450224
SNP sites on vista53819[chr6:139578405-139578747]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 139578614 rs75784813 G A,T
MAFF TCF4
9382124
chr6 139578697 rs185834628 T C
ESR1
9382125
chr6 139578709 rs943650 T C
NRL
9382126
Genes possibly regulated by vista53819[chr6:139578405-139578747]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 139561198 139613276 - TXLNB ENSG00000164440.10 139613276 0.95 0.94 7003 65471
Expression level of Genes
Back to top
miRNAs possibly regulated by vista53819[chr6:139578405-139578747]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results