EnhancerDB
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  3. vista53821[chr6:139618175-139618262]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53821[chr6:139618175-139618262]
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Tissue distribution of vista53821
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Transcription factor that possibly regulate vista53821[chr6:139618175-139618262]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 139618197 139618201 NFE TRANSFAC yes 70450313
chr6 139618197 139618211 RORA JASPAR yes 70450314
chr6 139618232 139618243 ELK4 JASPAR yes 70450315
chr6 139618232 139618243 FLI1 JASPAR yes 70450316
chr6 139618232 139618245 ELF3 JASPAR yes 70450317
chr6 139618233 139618243 ELK1 JASPAR yes 70450318
chr6 139618233 139618243 ELK3 JASPAR yes 70450319
chr6 139618233 139618243 ERF JASPAR yes 70450320
chr6 139618233 139618243 ERG JASPAR yes 70450321
chr6 139618233 139618243 ETS1 JASPAR yes 70450322
chr6 139618233 139618243 ETV1 JASPAR yes 70450323
chr6 139618233 139618243 ETV3 JASPAR yes 70450324
chr6 139618233 139618243 ETV4 JASPAR yes 70450325
chr6 139618233 139618243 ETV6 JASPAR yes 70450326
chr6 139618233 139618243 FEV JASPAR yes 70450327
chr6 139618233 139618243 FLI1 JASPAR yes 70450328
chr6 139618233 139618243 GABPA JASPAR yes 70450329
chr6 139618233 139618244 ELF5 JASPAR yes 70450330
chr6 139618233 139618244 ETV2 JASPAR yes 70450331
chr6 139618233 139618244 SPDEF JASPAR yes 70450332
chr6 139618233 139618245 EHF JASPAR yes 70450333
chr6 139618233 139618245 ELF1 JASPAR yes 70450334
chr6 139618233 139618245 ELF4 JASPAR yes 70450335
chr6 139618233 139618246 ELF1 JASPAR yes 70450336
chr6 139618234 139618241 SPI1 JASPAR yes 70450337
chr6 139618234 139618242 EHF JASPAR yes 70450338
chr6 139618234 139618242 FEV JASPAR yes 70450339
chr6 139618235 139618248 SCRT2 JASPAR yes 70450340
chr6 139618241 139618256 HNF1A JASPAR yes 70450341
chr6 139618242 139618255 HNF1B JASPAR yes 70450342
chr6 139618243 139618249 JUN TRANSFAC yes 70450343
chr6 139618248 139618252 YY1 TRANSFAC yes 70450344
SNP sites on vista53821[chr6:139618175-139618262]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 139618203 rs139408680 C T
RORA
9382310
Genes possibly regulated by vista53821[chr6:139618175-139618262]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 139561198 139613276 - TXLNB ENSG00000164440.10 139613276 0.95 0.94 7003 95101
chr6 139693393 139695757 - CITED2 ENSG00000164442.8 139695757 0.81 1.0 7004 22505
Expression level of Genes
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miRNAs possibly regulated by vista53821[chr6:139618175-139618262]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results