EnhancerDB
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  3. vista5388[chr1:227002760-227003096]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5388[chr1:227002760-227003096]
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Tissue distribution of vista5388
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Transcription factor that possibly regulate vista5388[chr1:227002760-227003096]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 227002495 227003246 POLR2A UCSC Txn Factor no Conserved 107876380
chr1 227002742 227003050 FOS UCSC Txn Factor no Conserved 107876393
chr1 227002755 227003299 STAT3 UCSC Txn Factor no Conserved 107876396
chr1 227002768 227003225 TFAP2C UCSC Txn Factor no Conserved 107876397
chr1 227002777 227003040 MAX UCSC Txn Factor no Conserved 107876401
chr1 227002793 227003575 TCF7L2 UCSC Txn Factor no Conserved 107876403
chr1 227002804 227003207 TFAP2A UCSC Txn Factor no Conserved 107876405
chr1 227002993 227003286 CEBPB UCSC Txn Factor no Conserved 107876430
chr1 227003094 227003240 PRDM1 UCSC Txn Factor no Conserved 107876432
chr1 227002756 227002768 ZBTB7A JASPAR yes 35847347
chr1 227002756 227002768 ZBTB7A JASPAR yes 118472857
chr1 227002761 227002765 H4TF2 TRANSFAC yes 35847348
chr1 227002761 227002765 H4TF2 TRANSFAC yes 118472858
chr1 227002778 227002799 ZNF263 JASPAR yes 35847349
chr1 227002778 227002799 ZNF263 JASPAR yes 118472859
chr1 227002785 227002806 ZNF263 JASPAR yes 35847350
chr1 227002785 227002806 ZNF263 JASPAR yes 118472860
chr1 227002786 227002807 ZNF263 JASPAR yes 35847351
chr1 227002786 227002807 ZNF263 JASPAR yes 118472861
chr1 227002787 227002792 ETS2 TRANSFAC yes 35847352
chr1 227002787 227002792 ETS2 TRANSFAC yes 118472862
chr1 227002811 227002826 PRDM1 JASPAR yes 35847353
chr1 227002811 227002826 PRDM1 JASPAR yes 118472863
chr1 227002840 227002855 TFAP2C JASPAR yes 35847354
chr1 227002840 227002855 TFAP2C JASPAR yes 118472864
chr1 227002842 227002854 INSM1 JASPAR yes 35847355
chr1 227002842 227002854 INSM1 JASPAR yes 118472865
chr1 227002843 227002854 TFAP2A JASPAR yes 35847356
chr1 227002843 227002854 TFAP2B JASPAR yes 35847357
chr1 227002843 227002854 TFAP2C JASPAR yes 35847358
chr1 227002843 227002854 TFAP2A JASPAR yes 118472866
chr1 227002843 227002854 TFAP2B JASPAR yes 118472867
chr1 227002843 227002854 TFAP2C JASPAR yes 118472868
chr1 227002844 227002853 TFAP2A JASPAR yes 35847359
chr1 227002844 227002853 TFAP2A JASPAR yes 118472869
chr1 227002856 227002861 ETS2 TRANSFAC yes 35847360
chr1 227002856 227002861 ETS2 TRANSFAC yes 118472870
chr1 227002858 227002872 JUN JASPAR yes 35847361
chr1 227002858 227002872 JUN JASPAR yes 118472871
chr1 227002861 227002872 FOSL2 JASPAR yes 35847362
chr1 227002861 227002872 JUNB JASPAR yes 35847363
chr1 227002861 227002872 FOSL2 JASPAR yes 118472872
chr1 227002861 227002872 JUNB JASPAR yes 118472873
chr1 227002862 227002873 FOSL1 JASPAR yes 35847364
chr1 227002862 227002873 FOSL1 JASPAR yes 118472874
chr1 227002863 227002870 JUN TRANSFAC yes 35847365
chr1 227002863 227002870 JUN TRANSFAC yes 118472875
chr1 227002863 227002874 NFE2L2 JASPAR yes 35847366
chr1 227002863 227002874 NFE2L2 JASPAR yes 118472876
chr1 227002913 227002917 YY1 TRANSFAC yes 35847367
chr1 227002913 227002917 YY1 TRANSFAC yes 118472877
chr1 227002913 227002928 STAT1 JASPAR yes 35847368
chr1 227002913 227002928 STAT1 JASPAR yes 118472878
chr1 227002915 227002926 STAT3 JASPAR yes 35847369
chr1 227002915 227002926 STAT3 JASPAR yes 118472879
chr1 227002923 227002936 SMAD2 JASPAR yes 35847370
chr1 227002923 227002936 SMAD2 JASPAR yes 118472880
chr1 227002928 227002936 TBX15 JASPAR yes 35847371
chr1 227002928 227002936 TBX4 JASPAR yes 35847372
chr1 227002928 227002936 TBX15 JASPAR yes 118472881
chr1 227002928 227002936 TBX4 JASPAR yes 118472882
chr1 227002928 227002937 ZEB1 JASPAR yes 35847373
chr1 227002928 227002937 ZEB1 JASPAR yes 118472883
chr1 227002928 227002940 NHLH1 JASPAR yes 35847374
chr1 227002928 227002940 NHLH1 JASPAR yes 118472884
chr1 227002929 227002939 ID4 JASPAR yes 35847375
chr1 227002929 227002939 NHLH1 JASPAR yes 35847376
chr1 227002929 227002939 TCF3 JASPAR yes 35847377
chr1 227002929 227002939 TCF4 JASPAR yes 35847378
chr1 227002929 227002939 ID4 JASPAR yes 118472885
chr1 227002929 227002939 NHLH1 JASPAR yes 118472886
chr1 227002929 227002939 TCF3 JASPAR yes 118472887
chr1 227002929 227002939 TCF4 JASPAR yes 118472888
chr1 227002930 227002939 SNAI2 JASPAR yes 35847379
chr1 227002930 227002939 SNAI2 JASPAR yes 118472889
chr1 227002931 227002936 USF2 TRANSFAC yes 35847380
chr1 227002931 227002936 USF2 TRANSFAC yes 118472890
chr1 227002956 227002971 HNF4A JASPAR yes 35847381
chr1 227002956 227002971 HNF4A JASPAR yes 118472891
chr1 227002957 227002972 HNF4G JASPAR yes 35847382
chr1 227002957 227002972 HNF4G JASPAR yes 118472892
chr1 227002966 227002985 CTCF JASPAR yes 35847383
chr1 227002966 227002985 CTCF JASPAR yes 118472893
chr1 227002969 227002980 USF1 JASPAR yes 35847384
chr1 227002969 227002980 USF2 JASPAR yes 35847385
chr1 227002969 227002980 USF1 JASPAR yes 118472894
chr1 227002969 227002980 USF2 JASPAR yes 118472895
chr1 227002970 227002977 USF2 TRANSFAC yes 35847386
chr1 227002970 227002977 USF2 TRANSFAC yes 118472896
chr1 227002972 227002977 USF2 TRANSFAC yes 35847387
chr1 227002972 227002977 USF2 TRANSFAC yes 118472897
chr1 227002981 227002987 MZF1 JASPAR yes 35847388
chr1 227002981 227002987 MZF1 JASPAR yes 118472898
chr1 227002993 227003008 TFAP2A JASPAR yes 35847389
chr1 227002993 227003008 TFAP2A JASPAR yes 118472899
chr1 227002995 227003010 TFAP2C JASPAR yes 35847390
chr1 227002995 227003010 TFAP2C JASPAR yes 118472900
chr1 227002997 227003006 TFAP2A JASPAR yes 35847391
chr1 227002997 227003006 TFAP2A JASPAR yes 118472901
chr1 227003001 227003006 SP1 TRANSFAC yes 35847392
chr1 227003001 227003006 SP1 TRANSFAC yes 118472902
chr1 227003068 227003071 MYB TRANSFAC yes 35847393
chr1 227003068 227003071 MYB TRANSFAC yes 118472903
chr1 227003068 227003088 ESR1 JASPAR yes 35847394
chr1 227003068 227003088 ESR1 JASPAR yes 118472904
chr1 227003070 227003076 SOX10 JASPAR yes 35847395
chr1 227003070 227003076 SOX10 JASPAR yes 118472905
chr1 227003071 227003089 ESR2 JASPAR yes 35847396
chr1 227003071 227003089 ESR2 JASPAR yes 118472906
chr1 227003073 227003088 ESR2 JASPAR yes 35847397
chr1 227003073 227003088 ESR2 JASPAR yes 118472907
chr1 227003081 227003096 LEF1 JASPAR yes 35847398
chr1 227003081 227003096 LEF1 JASPAR yes 118472908
chr1 227003082 227003096 TCF7L2 JASPAR yes 35847399
chr1 227003082 227003096 TCF7L2 JASPAR yes 118472909
SNP sites on vista5388[chr1:227002760-227003096]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 227002817 rs115417914 G A
FOS MAX POLR2A PRDM1 STAT3 TCF7L2 TFAP2A TFAP2C
995032
chr1 227002878 rs6426545 C T
FOS MAX POLR2A STAT3 TCF7L2 TFAP2A TFAP2C
995033
chr1 227002881 rs74139806 T G
FOS MAX POLR2A STAT3 TCF7L2 TFAP2A TFAP2C
995034
chr1 227002930 rs142469147 C T
FOS ID4 MAX NHLH1 POLR2A SMAD2 SNAI2 STAT3 TBX15 TBX4 TCF3 TCF4 TCF7L2 TFAP2A TFAP2C ZEB1
995035
chr1 227003044 rs79905624 G A
CEBPB FOS POLR2A STAT3 TCF7L2 TFAP2A TFAP2C
995036
Genes possibly regulated by vista5388[chr1:227002760-227003096]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 226819391 226927024 - ITPKB ENSG00000143772.5 226927024 0.8 0.99 1902 24264
chr1 227057885 227083806 + PSEN2 ENSG00000143801.12 227057885 0.67 1.0 1903 45211
chr1 227085237 227175246 + ADCK3 ENSG00000163050.12 227085237 0.87 1.0 1904 17859
Expression level of Genes
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miRNAs possibly regulated by vista5388[chr1:227002760-227003096]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results