EnhancerDB
  1. Home
  2. Enhancers
  3. vista5389[chr1:227009018-227009221]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5389[chr1:227009018-227009221]
Back to top
Tissue distribution of vista5389
Back to top
Transcription factor that possibly regulate vista5389[chr1:227009018-227009221]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 227008924 227009324 FOS UCSC Txn Factor no Conserved 107876434
chr1 227008999 227009339 JUN UCSC Txn Factor no Conserved 107876441
chr1 227009037 227009042 GATA2 JASPAR yes 35848252
chr1 227009037 227009042 GATA2 JASPAR yes 118472910
chr1 227009043 227009054 DUX4 JASPAR yes 35848253
chr1 227009043 227009054 DUX4 JASPAR yes 118472911
chr1 227009060 227009073 EOMES JASPAR yes 35848254
chr1 227009060 227009073 EOMES JASPAR yes 118472912
chr1 227009061 227009075 MTF1 JASPAR yes 35848255
chr1 227009061 227009075 MTF1 JASPAR yes 118472913
chr1 227009062 227009073 TBX2 JASPAR yes 35848256
chr1 227009062 227009073 TBX2 JASPAR yes 118472914
chr1 227009063 227009079 ZNF143 JASPAR yes 35848257
chr1 227009063 227009079 ZNF143 JASPAR yes 118472915
chr1 227009072 227009086 SPI1 JASPAR yes 35848258
chr1 227009072 227009086 SPI1 JASPAR yes 118472916
chr1 227009102 227009116 JUN JASPAR yes 35848259
chr1 227009102 227009116 JUN JASPAR yes 118472917
chr1 227009105 227009116 FOSL2 JASPAR yes 35848260
chr1 227009105 227009116 JUNB JASPAR yes 35848261
chr1 227009105 227009116 FOSL2 JASPAR yes 118472918
chr1 227009105 227009116 JUNB JASPAR yes 118472919
chr1 227009106 227009117 FOS JASPAR yes 35848262
chr1 227009106 227009117 FOSL1 JASPAR yes 35848263
chr1 227009106 227009117 JUND JASPAR yes 35848264
chr1 227009106 227009117 FOS JASPAR yes 118472920
chr1 227009106 227009117 FOSL1 JASPAR yes 118472921
chr1 227009106 227009117 JUND JASPAR yes 118472922
chr1 227009107 227009114 JUN TRANSFAC yes 35848265
chr1 227009107 227009114 JUN TRANSFAC yes 118472923
chr1 227009108 227009119 BATF JASPAR yes 35848266
chr1 227009108 227009119 BATF JASPAR yes 118472924
chr1 227009127 227009136 PITX3 JASPAR yes 35848267
chr1 227009127 227009136 PITX3 JASPAR yes 118472925
chr1 227009128 227009136 OTX2 JASPAR yes 35848268
chr1 227009128 227009136 OTX2 JASPAR yes 118472926
chr1 227009155 227009169 ATF7 JASPAR yes 35848269
chr1 227009155 227009169 BATF3 JASPAR yes 35848270
chr1 227009155 227009169 ATF7 JASPAR yes 118472927
chr1 227009155 227009169 BATF3 JASPAR yes 118472928
chr1 227009156 227009168 JDP2 JASPAR yes 35848271
chr1 227009156 227009168 JDP2 JASPAR yes 118472929
chr1 227009182 227009188 PEA3 TRANSFAC yes 35848272
chr1 227009182 227009188 PEA3 TRANSFAC yes 118472930
chr1 227009183 227009191 EHF JASPAR yes 35848273
chr1 227009183 227009191 EHF JASPAR yes 118472931
chr1 227009190 227009202 PKNOX1 JASPAR yes 35848274
chr1 227009190 227009202 PKNOX2 JASPAR yes 35848275
chr1 227009190 227009202 TGIF1 JASPAR yes 35848276
chr1 227009190 227009202 TGIF2 JASPAR yes 35848277
chr1 227009190 227009202 PKNOX1 JASPAR yes 118472932
chr1 227009190 227009202 PKNOX2 JASPAR yes 118472933
chr1 227009190 227009202 TGIF1 JASPAR yes 118472934
chr1 227009190 227009202 TGIF2 JASPAR yes 118472935
chr1 227009190 227009203 ZBTB18 JASPAR yes 35848278
chr1 227009190 227009203 ZBTB18 JASPAR yes 118472936
chr1 227009196 227009200 NFE TRANSFAC yes 35848279
chr1 227009196 227009200 NFE TRANSFAC yes 118472937
chr1 227009207 227009214 MEIS1 JASPAR yes 35848280
chr1 227009207 227009214 MEIS1 JASPAR yes 118472938
SNP sites on vista5389[chr1:227009018-227009221]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 227009070 rs149781456 C T
EOMES FOS JUN MTF1 TBX2 ZNF143
995113
chr1 227009157 rs75230047 G T
ATF7 BATF3 FOS JDP2 JUN
995114
chr1 227009167 rs555217690 T A,C
ATF7 BATF3 FOS JDP2 JUN
995115
Genes possibly regulated by vista5389[chr1:227009018-227009221]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 226819391 226927024 - ITPKB ENSG00000143772.5 226927024 0.8 0.99 1902 18006
chr1 227057885 227083806 + PSEN2 ENSG00000143801.12 227057885 0.67 1.0 1903 51336
chr1 227085237 227175246 + ADCK3 ENSG00000163050.12 227085237 0.87 1.0 1904 23984
Expression level of Genes
Back to top
miRNAs possibly regulated by vista5389[chr1:227009018-227009221]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results