EnhancerDB
  1. Home
  2. Enhancers
  3. vista5390[chr1:227060204-227060463]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5390[chr1:227060204-227060463]
Back to top
Tissue distribution of vista5390
Back to top
Transcription factor that possibly regulate vista5390[chr1:227060204-227060463]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 227060247 227060262 STAT1 JASPAR yes 35852757
chr1 227060247 227060262 STAT1 JASPAR yes 118472939
chr1 227060249 227060260 STAT1 JASPAR yes 35852758
chr1 227060249 227060260 STAT3 JASPAR yes 35852759
chr1 227060249 227060260 STAT1 JASPAR yes 118472940
chr1 227060249 227060260 STAT3 JASPAR yes 118472941
chr1 227060271 227060277 MZF1 JASPAR yes 35852760
chr1 227060271 227060277 MZF1 JASPAR yes 118472942
chr1 227060281 227060292 FLI1 JASPAR yes 35852761
chr1 227060281 227060292 FLI1 JASPAR yes 118472943
chr1 227060283 227060290 SPI1 JASPAR yes 35852762
chr1 227060283 227060290 SPI1 JASPAR yes 118472944
chr1 227060283 227060291 EHF JASPAR yes 35852763
chr1 227060283 227060291 FEV JASPAR yes 35852764
chr1 227060283 227060291 EHF JASPAR yes 118472945
chr1 227060283 227060291 FEV JASPAR yes 118472946
chr1 227060293 227060305 FOXI1 JASPAR yes 35852765
chr1 227060293 227060305 FOXI1 JASPAR yes 118472947
chr1 227060294 227060310 SOX8 JASPAR yes 35852766
chr1 227060294 227060310 SOX8 JASPAR yes 118472948
chr1 227060314 227060326 IRF1 JASPAR yes 35852767
chr1 227060314 227060326 IRF1 JASPAR yes 118472949
chr1 227060328 227060342 RORA JASPAR yes 35852768
chr1 227060328 227060342 RORA JASPAR yes 118472950
chr1 227060336 227060340 ESR1 TRANSFAC yes 35852769
chr1 227060336 227060340 ESR1 TRANSFAC yes 118472951
chr1 227060336 227060347 USF1 JASPAR yes 35852770
chr1 227060336 227060347 USF2 JASPAR yes 35852771
chr1 227060336 227060347 USF1 JASPAR yes 118472952
chr1 227060336 227060347 USF2 JASPAR yes 118472953
chr1 227060355 227060366 FOXB1 JASPAR yes 35852772
chr1 227060355 227060366 FOXC1 JASPAR yes 35852773
chr1 227060355 227060366 FOXB1 JASPAR yes 118472954
chr1 227060355 227060366 FOXC1 JASPAR yes 118472955
chr1 227060357 227060365 FOXO3 JASPAR yes 35852774
chr1 227060357 227060365 FOXO3 JASPAR yes 118472956
chr1 227060370 227060375 SP1 TRANSFAC yes 35852775
chr1 227060370 227060375 SP1 TRANSFAC yes 118472957
chr1 227060378 227060388 TFAP4 JASPAR yes 35852776
chr1 227060378 227060388 TFAP4 JASPAR yes 118472958
chr1 227060379 227060392 SCRT2 JASPAR yes 35852777
chr1 227060379 227060392 SCRT2 JASPAR yes 118472959
chr1 227060382 227060394 IRF1 JASPAR yes 35852778
chr1 227060382 227060394 IRF1 JASPAR yes 118472960
chr1 227060383 227060401 IRF2 JASPAR yes 35852779
chr1 227060383 227060401 IRF2 JASPAR yes 118472961
chr1 227060388 227060400 IRF1 JASPAR yes 35852780
chr1 227060388 227060400 IRF1 JASPAR yes 118472962
chr1 227060388 227060402 IRF7 JASPAR yes 35852781
chr1 227060388 227060402 IRF8 JASPAR yes 35852782
chr1 227060388 227060402 IRF7 JASPAR yes 118472963
chr1 227060388 227060402 IRF8 JASPAR yes 118472964
chr1 227060414 227060419 TFAP2A TRANSFAC yes 35852783
chr1 227060414 227060419 TFAP2A TRANSFAC yes 118472965
chr1 227060414 227060420 MZF1 JASPAR yes 35852784
chr1 227060414 227060420 MZF1 JASPAR yes 118472966
chr1 227060417 227060438 MAFG JASPAR yes 35852785
chr1 227060417 227060438 MAFG JASPAR yes 118472967
chr1 227060419 227060433 GATA2 JASPAR yes 35852786
chr1 227060419 227060433 GATA2 JASPAR yes 118472968
chr1 227060421 227060427 GATA1 TRANSFAC yes 35852787
chr1 227060421 227060427 GATA1 TRANSFAC yes 118472969
chr1 227060421 227060429 GATA5 JASPAR yes 35852788
chr1 227060421 227060429 GATA5 JASPAR yes 118472970
chr1 227060422 227060440 MAFF JASPAR yes 35852789
chr1 227060422 227060440 MAFF JASPAR yes 118472971
chr1 227060436 227060440 YY1 TRANSFAC yes 35852790
chr1 227060436 227060440 YY1 TRANSFAC yes 118472972
chr1 227060451 227060459 TBX15 JASPAR yes 35852791
chr1 227060451 227060459 TBX15 JASPAR yes 118472973
chr1 227060451 227060460 ZEB1 JASPAR yes 35852792
chr1 227060451 227060460 ZEB1 JASPAR yes 118472974
chr1 227060452 227060462 FIGLA JASPAR yes 35852793
chr1 227060452 227060462 TCF3 JASPAR yes 35852794
chr1 227060452 227060462 TCF4 JASPAR yes 35852795
chr1 227060452 227060462 FIGLA JASPAR yes 118472975
chr1 227060452 227060462 TCF3 JASPAR yes 118472976
chr1 227060452 227060462 TCF4 JASPAR yes 118472977
chr1 227060453 227060462 SNAI2 JASPAR yes 35852796
chr1 227060453 227060462 SNAI2 JASPAR yes 118472978
chr1 227060454 227060459 USF2 TRANSFAC yes 35852797
chr1 227060454 227060459 USF2 TRANSFAC yes 118472979
chr1 227060455 227060461 PTF TRANSFAC yes 35852798
chr1 227060455 227060461 PTF TRANSFAC yes 118472980
SNP sites on vista5390[chr1:227060204-227060463]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 227060226 rs532285087 A C,G no 995557
chr1 227060342 rs1297990 C T
RORA USF1 USF2
995558
chr1 227060431 rs150931933 A T
GATA2 MAFF MAFG
995559
Genes possibly regulated by vista5390[chr1:227060204-227060463]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 227057885 227083806 + PSEN2 ENSG00000143801.12 227057885 0.67 1.0 1903 97681
chr1 227085237 227175246 + ADCK3 ENSG00000163050.12 227085237 0.87 1.0 1904 75226
Expression level of Genes
Back to top
miRNAs possibly regulated by vista5390[chr1:227060204-227060463]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results