EnhancerDB
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  3. vista5394[chr1:227499470-227499818]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5394[chr1:227499470-227499818]
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Tissue distribution of vista5394
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Transcription factor that possibly regulate vista5394[chr1:227499470-227499818]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 227499493 227499514 ZNF263 JASPAR yes 35868639
chr1 227499493 227499514 ZNF263 JASPAR yes 118473011
chr1 227499499 227499520 ZNF263 JASPAR yes 35868640
chr1 227499499 227499520 ZNF263 JASPAR yes 118473012
chr1 227499503 227499507 NFE TRANSFAC yes 35868641
chr1 227499503 227499507 NFE TRANSFAC yes 118473013
chr1 227499503 227499516 SMAD2 JASPAR yes 35868642
chr1 227499503 227499516 SMAD2 JASPAR yes 118473014
chr1 227499505 227499516 E2F6 JASPAR yes 35868643
chr1 227499505 227499516 E2F6 JASPAR yes 118473015
chr1 227499506 227499527 ZNF263 JASPAR yes 35868644
chr1 227499506 227499527 ZNF263 JASPAR yes 118473016
chr1 227499509 227499530 ZNF263 JASPAR yes 35868645
chr1 227499509 227499530 ZNF263 JASPAR yes 118473017
chr1 227499512 227499533 ZNF263 JASPAR yes 35868646
chr1 227499512 227499533 ZNF263 JASPAR yes 118473018
chr1 227499517 227499538 IRF1 JASPAR yes 35868647
chr1 227499517 227499538 IRF1 JASPAR yes 118473019
chr1 227499520 227499541 ZNF263 JASPAR yes 35868648
chr1 227499520 227499541 ZNF263 JASPAR yes 118473020
chr1 227499521 227499536 PRDM1 JASPAR yes 35868649
chr1 227499521 227499536 PRDM1 JASPAR yes 118473021
chr1 227499524 227499545 ZNF263 JASPAR yes 35868650
chr1 227499524 227499545 ZNF263 JASPAR yes 118473022
chr1 227499532 227499543 E2F6 JASPAR yes 35868651
chr1 227499532 227499543 E2F6 JASPAR yes 118473023
chr1 227499532 227499553 ZNF263 JASPAR yes 35868652
chr1 227499532 227499553 ZNF263 JASPAR yes 118473024
chr1 227499535 227499545 SP1 JASPAR yes 35868653
chr1 227499535 227499545 SP1 JASPAR yes 118473025
chr1 227499535 227499556 ZNF263 JASPAR yes 35868654
chr1 227499535 227499556 ZNF263 JASPAR yes 118473026
chr1 227499538 227499559 ZNF263 JASPAR yes 35868655
chr1 227499538 227499559 ZNF263 JASPAR yes 118473027
chr1 227499563 227499567 YY1 TRANSFAC yes 35868656
chr1 227499563 227499567 YY1 TRANSFAC yes 118473028
chr1 227499576 227499581 GATA1 TRANSFAC yes 35868657
chr1 227499576 227499581 GATA1 TRANSFAC yes 118473029
chr1 227499581 227499590 THAP1 JASPAR yes 35868658
chr1 227499581 227499590 THAP1 JASPAR yes 118473030
chr1 227499619 227499625 JUN TRANSFAC yes 35868659
chr1 227499619 227499625 JUN TRANSFAC yes 118473031
chr1 227499635 227499639 NFE TRANSFAC yes 35868660
chr1 227499635 227499639 NFE TRANSFAC yes 118473032
chr1 227499664 227499668 NFE TRANSFAC yes 35868661
chr1 227499664 227499668 NFE TRANSFAC yes 118473033
chr1 227499670 227499681 FOXC1 JASPAR yes 35868662
chr1 227499670 227499681 FOXC1 JASPAR yes 118473034
chr1 227499670 227499685 PRDM1 JASPAR yes 35868663
chr1 227499670 227499685 PRDM1 JASPAR yes 118473035
chr1 227499671 227499675 YY1 TRANSFAC yes 35868664
chr1 227499671 227499675 YY1 TRANSFAC yes 118473036
chr1 227499676 227499688 HNF1B JASPAR yes 35868665
chr1 227499676 227499688 HNF1B JASPAR yes 118473037
chr1 227499677 227499692 MYBL2 JASPAR yes 35868666
chr1 227499677 227499692 MYBL2 JASPAR yes 118473038
chr1 227499684 227499687 MYB TRANSFAC yes 35868667
chr1 227499684 227499687 MYB TRANSFAC yes 118473039
chr1 227499686 227499698 FOXC2 JASPAR yes 35868668
chr1 227499686 227499698 FOXC2 JASPAR yes 118473040
chr1 227499721 227499725 YY1 TRANSFAC yes 35868669
chr1 227499721 227499725 YY1 TRANSFAC yes 118473041
chr1 227499727 227499742 MEF2A JASPAR yes 35868670
chr1 227499727 227499742 MEF2A JASPAR yes 118473042
chr1 227499728 227499743 MEF2C JASPAR yes 35868671
chr1 227499728 227499743 MEF2C JASPAR yes 118473043
chr1 227499729 227499741 MEF2A JASPAR yes 35868672
chr1 227499729 227499741 MEF2B JASPAR yes 35868673
chr1 227499729 227499741 MEF2D JASPAR yes 35868674
chr1 227499729 227499741 MEF2A JASPAR yes 118473044
chr1 227499729 227499741 MEF2B JASPAR yes 118473045
chr1 227499729 227499741 MEF2D JASPAR yes 118473046
chr1 227499730 227499740 MEF2A JASPAR yes 35868675
chr1 227499730 227499740 MEF2A JASPAR yes 118473047
chr1 227499730 227499744 GATA2 JASPAR yes 35868676
chr1 227499730 227499744 GATA2 JASPAR yes 118473048
chr1 227499731 227499735 YY1 TRANSFAC yes 35868677
chr1 227499731 227499735 YY1 TRANSFAC yes 118473049
chr1 227499734 227499742 GATA3 JASPAR yes 35868678
chr1 227499734 227499742 GATA3 JASPAR yes 118473050
chr1 227499774 227499789 FOXP1 JASPAR yes 35868679
chr1 227499774 227499789 FOXP1 JASPAR yes 118473051
chr1 227499777 227499788 FOXP2 JASPAR yes 35868680
chr1 227499777 227499788 FOXP2 JASPAR yes 118473052
chr1 227499778 227499786 FOXO3 JASPAR yes 35868681
chr1 227499778 227499786 FOXO3 JASPAR yes 118473053
chr1 227499781 227499787 HiNF-A TRANSFAC yes 35868682
chr1 227499781 227499787 HiNF-A TRANSFAC yes 118473054
chr1 227499803 227499810 NKX3-1 JASPAR yes 35868683
chr1 227499803 227499810 NKX3-1 JASPAR yes 118473055
chr1 227499810 227499815 ETS2 TRANSFAC yes 35868684
chr1 227499810 227499815 ETS2 TRANSFAC yes 118473056
SNP sites on vista5394[chr1:227499470-227499818]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 227499486 rs76935054 A G no 997292
chr1 227499511 rs186721939 C T
E2F6 SMAD2 ZNF263
997293
chr1 227499588 rs12073573 A G
THAP1
997294
chr1 227499593 rs11804709 T C no 997295
chr1 227499717 rs77877041 T C no 997296
chr1 227499718 rs59596249 G A no 997297
Genes possibly regulated by vista5394[chr1:227499470-227499818]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 227177566 227506175 - CDC42BPA ENSG00000143776.14 227506175 0.77 0.99 1905 93643
Expression level of Genes
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miRNAs possibly regulated by vista5394[chr1:227499470-227499818]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results