EnhancerDB
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  3. vista5395[chr1:227730002-227730151]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5395[chr1:227730002-227730151]
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Tissue distribution of vista5395
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Transcription factor that possibly regulate vista5395[chr1:227730002-227730151]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 227729896 227730802 POLR2A UCSC Txn Factor no Conserved 107876551
chr1 227730014 227730019 SP1 TRANSFAC yes 35882768
chr1 227730014 227730019 SP1 TRANSFAC yes 118473057
chr1 227730018 227730033 TFAP2A JASPAR yes 35882769
chr1 227730018 227730033 TFAP2C JASPAR yes 35882770
chr1 227730018 227730033 TFAP2A JASPAR yes 118473058
chr1 227730018 227730033 TFAP2C JASPAR yes 118473059
chr1 227730027 227730036 TFAP2A JASPAR yes 35882771
chr1 227730027 227730036 TFAP2A JASPAR yes 118473060
chr1 227730056 227730062 SP1 TRANSFAC yes 35882772
chr1 227730056 227730062 SP1 TRANSFAC yes 118473061
chr1 227730057 227730062 SP1 TRANSFAC yes 35882773
chr1 227730057 227730062 SP1 TRANSFAC yes 118473062
chr1 227730061 227730072 NFKB1 JASPAR yes 35882774
chr1 227730061 227730072 NFKB1 JASPAR yes 118473063
chr1 227730073 227730094 REST JASPAR yes 35882775
chr1 227730073 227730094 REST JASPAR yes 118473064
chr1 227730074 227730093 REST JASPAR yes 35882776
chr1 227730074 227730093 REST JASPAR yes 118473065
chr1 227730090 227730101 ELK4 JASPAR yes 35882777
chr1 227730090 227730101 FLI1 JASPAR yes 35882778
chr1 227730090 227730101 ELK4 JASPAR yes 118473066
chr1 227730090 227730101 FLI1 JASPAR yes 118473067
chr1 227730091 227730101 ETV6 JASPAR yes 35882779
chr1 227730091 227730101 GABPA JASPAR yes 35882780
chr1 227730091 227730101 ETV6 JASPAR yes 118473068
chr1 227730091 227730101 GABPA JASPAR yes 118473069
chr1 227730093 227730099 ETS1 JASPAR yes 35882781
chr1 227730093 227730099 SPI1 JASPAR yes 35882782
chr1 227730093 227730099 ETS1 JASPAR yes 118473070
chr1 227730093 227730099 SPI1 JASPAR yes 118473071
chr1 227730096 227730101 SP1 TRANSFAC yes 35882783
chr1 227730096 227730101 SP1 TRANSFAC yes 118473072
chr1 227730096 227730102 SP1 TRANSFAC yes 35882784
chr1 227730096 227730102 SP1 TRANSFAC yes 118473073
chr1 227730098 227730109 NRF1 JASPAR yes 35882785
chr1 227730098 227730109 NRF1 JASPAR yes 118473074
chr1 227730107 227730112 SP1 TRANSFAC yes 35882786
chr1 227730107 227730112 SP1 TRANSFAC yes 118473075
chr1 227730119 227730130 USF1 JASPAR yes 35882787
chr1 227730119 227730130 USF2 JASPAR yes 35882788
chr1 227730119 227730130 USF1 JASPAR yes 118473076
chr1 227730119 227730130 USF2 JASPAR yes 118473077
SNP sites on vista5395[chr1:227730002-227730151]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 227730002 rs541101247 A G
POLR2A
998571
Genes possibly regulated by vista5395[chr1:227730002-227730151]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 227751244 227865144 + ZNF678 ENSG00000181450.13 227751244 0.84 0.98 1906 78907
Expression level of Genes
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miRNAs possibly regulated by vista5395[chr1:227730002-227730151]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results