EnhancerDB
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  3. vista5396[chr1:227751865-227752213]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5396[chr1:227751865-227752213]
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Tissue distribution of vista5396
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Transcription factor that possibly regulate vista5396[chr1:227751865-227752213]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 227751043 227751982 POLR2A UCSC Txn Factor no Conserved 107876582
chr1 227751154 227751885 PHF8 UCSC Txn Factor no Conserved 107876584
chr1 227751865 227751886 ZNF263 JASPAR yes 118473078
chr1 227751879 227751884 ETS2 TRANSFAC yes 118473079
chr1 227751891 227751902 NFIL3 JASPAR yes 118473080
chr1 227751900 227751920 TP63 JASPAR yes 118473081
chr1 227751901 227751915 SPIC JASPAR yes 118473082
chr1 227751919 227751930 PHOX2A JASPAR yes 118473083
chr1 227751919 227751930 PROP1 JASPAR yes 118473084
chr1 227751921 227751935 POU4F1 JASPAR yes 118473085
chr1 227751921 227751936 HNF1A JASPAR yes 118473086
chr1 227751922 227751935 HNF1B JASPAR yes 118473087
chr1 227751922 227751936 POU4F1 JASPAR yes 118473088
chr1 227751922 227751938 POU4F2 JASPAR yes 118473089
chr1 227751922 227751938 POU4F3 JASPAR yes 118473090
chr1 227751923 227751935 HNF1B JASPAR yes 118473091
chr1 227751946 227751962 SRF JASPAR yes 118473092
chr1 227751946 227751964 SRF JASPAR yes 118473093
chr1 227751947 227751959 SRF JASPAR yes 118473094
chr1 227751949 227751961 SRF JASPAR yes 118473095
chr1 227751952 227751956 YY1 TRANSFAC yes 118473096
chr1 227751960 227751964 NFE TRANSFAC yes 118473097
chr1 227751963 227751973 FIGLA JASPAR yes 118473098
chr1 227751969 227751980 NFKB1 JASPAR yes 118473099
chr1 227751970 227751980 NFKB1 JASPAR yes 118473100
chr1 227751970 227751981 NFKB1 JASPAR yes 118473101
chr1 227751972 227751985 ELF3 JASPAR yes 118473102
chr1 227751973 227751984 ELF5 JASPAR yes 118473103
chr1 227751973 227751985 EHF JASPAR yes 118473104
chr1 227751973 227751985 ELF1 JASPAR yes 118473105
chr1 227751973 227751985 ELF4 JASPAR yes 118473106
chr1 227751973 227751986 ELF1 JASPAR yes 118473107
chr1 227751974 227751982 FEV JASPAR yes 118473108
chr1 227751981 227751996 HNF1A JASPAR yes 118473109
chr1 227751983 227751994 PHOX2A JASPAR yes 118473110
chr1 227751983 227751994 PROP1 JASPAR yes 118473111
chr1 227751984 227751988 YY1 TRANSFAC yes 118473112
chr1 227751985 227751996 HOXA10 JASPAR yes 118473113
chr1 227751986 227751996 EMX1 JASPAR yes 118473114
chr1 227751986 227751996 GBX2 JASPAR yes 118473115
chr1 227751986 227751996 GSX1 JASPAR yes 118473116
chr1 227751986 227751996 GSX2 JASPAR yes 118473117
chr1 227751986 227751996 HOXB2 JASPAR yes 118473118
chr1 227751986 227751996 HOXB3 JASPAR yes 118473119
chr1 227751986 227751996 MEOX1 JASPAR yes 118473120
chr1 227751986 227751996 MEOX2 JASPAR yes 118473121
chr1 227751986 227751996 MIXL1 JASPAR yes 118473122
chr1 227751986 227751996 MNX1 JASPAR yes 118473123
chr1 227751987 227751995 LMX1A JASPAR yes 118473124
chr1 227751987 227751995 LMX1B JASPAR yes 118473125
chr1 227751987 227751995 NKX6-1 JASPAR yes 118473126
chr1 227751987 227751995 NKX6-2 JASPAR yes 118473127
chr1 227751987 227751995 PDX1 JASPAR yes 118473128
chr1 227751987 227751995 VAX1 JASPAR yes 118473129
chr1 227751987 227751995 VAX2 JASPAR yes 118473130
chr1 227751987 227751995 VSX1 JASPAR yes 118473131
chr1 227751989 227751997 HOXA5 JASPAR yes 118473132
chr1 227751989 227752004 HNF1A JASPAR yes 118473133
chr1 227751990 227752003 HNF1B JASPAR yes 118473134
chr1 227751990 227752004 ONECUT3 JASPAR yes 118473135
chr1 227751991 227752003 HNF1B JASPAR yes 118473136
chr1 227751993 227752003 LHX6 JASPAR yes 118473137
chr1 227751997 227752007 ALX3 JASPAR yes 118473138
chr1 227751997 227752007 ESX1 JASPAR yes 118473139
chr1 227751997 227752007 GSX1 JASPAR yes 118473140
chr1 227751997 227752007 GSX2 JASPAR yes 118473141
chr1 227751997 227752007 LBX2 JASPAR yes 118473142
chr1 227751997 227752007 RAX JASPAR yes 118473143
chr1 227751998 227752006 BARX1 JASPAR yes 118473144
chr1 227751998 227752006 BSX JASPAR yes 118473145
chr1 227751998 227752006 DLX6 JASPAR yes 118473146
chr1 227751998 227752006 ISX JASPAR yes 118473147
chr1 227751998 227752006 LBX1 JASPAR yes 118473148
chr1 227751998 227752006 LHX9 JASPAR yes 118473149
chr1 227751998 227752006 MSX1 JASPAR yes 118473150
chr1 227751998 227752006 MSX2 JASPAR yes 118473151
chr1 227751998 227752006 NKX6-2 JASPAR yes 118473152
chr1 227751998 227752006 PRRX1 JASPAR yes 118473153
chr1 227751998 227752006 RAX2 JASPAR yes 118473154
chr1 227751998 227752006 SHOX JASPAR yes 118473155
chr1 227751998 227752006 UNCX JASPAR yes 118473156
chr1 227752003 227752023 RREB1 JASPAR yes 118473157
chr1 227752006 227752024 NFYA JASPAR yes 118473158
chr1 227752009 227752025 NFYA JASPAR yes 118473159
chr1 227752012 227752027 NFYB JASPAR yes 118473160
chr1 227752014 227752019 NFY TRANSFAC yes 118473161
chr1 227752031 227752037 TCF4 TRANSFAC yes 118473162
chr1 227752050 227752060 EMX1 JASPAR yes 118473163
chr1 227752050 227752060 HOXB2 JASPAR yes 118473164
chr1 227752050 227752060 HOXB3 JASPAR yes 118473165
chr1 227752050 227752060 MEOX1 JASPAR yes 118473166
chr1 227752050 227752060 MEOX2 JASPAR yes 118473167
chr1 227752051 227752059 NKX6-1 JASPAR yes 118473168
chr1 227752053 227752057 YY1 TRANSFAC yes 118473169
chr1 227752056 227752059 MYB TRANSFAC yes 118473170
chr1 227752061 227752067 HiNF-A TRANSFAC yes 118473171
chr1 227752068 227752072 YY1 TRANSFAC yes 118473172
chr1 227752075 227752087 MEF2A JASPAR yes 118473173
chr1 227752075 227752087 MEF2B JASPAR yes 118473174
chr1 227752075 227752087 MEF2D JASPAR yes 118473175
chr1 227752076 227752086 MEF2A JASPAR yes 118473176
chr1 227752085 227752098 POU2F2 JASPAR yes 118473177
chr1 227752127 227752137 GBX2 JASPAR yes 118473178
chr1 227752127 227752137 MNX1 JASPAR yes 118473179
chr1 227752128 227752136 BARX1 JASPAR yes 118473180
chr1 227752128 227752136 EN1 JASPAR yes 118473181
chr1 227752128 227752136 ISL2 JASPAR yes 118473182
chr1 227752128 227752136 MSX1 JASPAR yes 118473183
chr1 227752128 227752136 MSX2 JASPAR yes 118473184
chr1 227752128 227752136 PDX1 JASPAR yes 118473185
chr1 227752137 227752147 POU6F2 JASPAR yes 118473186
chr1 227752138 227752148 EMX1 JASPAR yes 118473187
chr1 227752138 227752148 EMX2 JASPAR yes 118473188
chr1 227752138 227752148 ESX1 JASPAR yes 118473189
chr1 227752138 227752148 EVX1 JASPAR yes 118473190
chr1 227752138 227752148 EVX2 JASPAR yes 118473191
chr1 227752138 227752148 GBX2 JASPAR yes 118473192
chr1 227752138 227752148 HESX1 JASPAR yes 118473193
chr1 227752138 227752148 HOXA2 JASPAR yes 118473194
chr1 227752138 227752148 HOXB2 JASPAR yes 118473195
chr1 227752138 227752148 HOXB3 JASPAR yes 118473196
chr1 227752138 227752148 LHX2 JASPAR yes 118473197
chr1 227752138 227752148 LHX6 JASPAR yes 118473198
chr1 227752138 227752148 MEOX1 JASPAR yes 118473199
chr1 227752138 227752148 MEOX2 JASPAR yes 118473200
chr1 227752138 227752148 POU6F1 JASPAR yes 118473201
chr1 227752138 227752148 RAX JASPAR yes 118473202
chr1 227752139 227752147 LBX1 JASPAR yes 118473203
chr1 227752139 227752147 PDX1 JASPAR yes 118473204
chr1 227752139 227752147 VAX1 JASPAR yes 118473205
chr1 227752139 227752147 VAX2 JASPAR yes 118473206
chr1 227752139 227752147 VSX1 JASPAR yes 118473207
chr1 227752139 227752147 VSX2 JASPAR yes 118473208
chr1 227752140 227752151 PHOX2A JASPAR yes 118473209
chr1 227752140 227752151 PROP1 JASPAR yes 118473210
chr1 227752144 227752148 YY1 TRANSFAC yes 118473211
chr1 227752149 227752152 MYB TRANSFAC yes 118473212
chr1 227752180 227752184 YY1 TRANSFAC yes 118473213
chr1 227752181 227752191 NFATC3 JASPAR yes 118473214
chr1 227752182 227752189 NFATC2 JASPAR yes 118473215
chr1 227752191 227752194 MYB TRANSFAC yes 118473216
SNP sites on vista5396[chr1:227751865-227752213]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 227751934 rs181765339 A G
HNF1A HNF1B POLR2A POU4F1 POU4F2 POU4F3
998705
Genes possibly regulated by vista5396[chr1:227751865-227752213]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 227751244 227865144 + ZNF678 ENSG00000181450.13 227751244 0.84 0.98 1906 99379
Expression level of Genes
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miRNAs possibly regulated by vista5396[chr1:227751865-227752213]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results