EnhancerDB
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  3. vista5397[chr1:227936688-227936978]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5397[chr1:227936688-227936978]
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Tissue distribution of vista5397
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Transcription factor that possibly regulate vista5397[chr1:227936688-227936978]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 227936000 227936755 POLR2A UCSC Txn Factor no Conserved 107876605
chr1 227936642 227936966 CEBPB UCSC Txn Factor no Conserved 107876615
chr1 227936703 227936717 STAT1 JASPAR yes 35884639
chr1 227936703 227936717 STAT1 JASPAR yes 118473217
chr1 227936710 227936724 GATA2 JASPAR yes 35884640
chr1 227936710 227936724 GATA2 JASPAR yes 118473218
chr1 227936714 227936722 GATA3 JASPAR yes 35884641
chr1 227936714 227936722 GATA3 JASPAR yes 118473219
chr1 227936726 227936736 BARHL2 JASPAR yes 35884642
chr1 227936726 227936736 BARHL2 JASPAR yes 118473220
chr1 227936728 227936732 YY1 TRANSFAC yes 35884643
chr1 227936728 227936732 YY1 TRANSFAC yes 118473221
chr1 227936735 227936739 YY1 TRANSFAC yes 35884644
chr1 227936735 227936739 YY1 TRANSFAC yes 118473222
chr1 227936748 227936763 STAT1 JASPAR yes 35884645
chr1 227936748 227936763 STAT1 JASPAR yes 118473223
chr1 227936750 227936761 STAT1 JASPAR yes 35884646
chr1 227936750 227936761 STAT1 JASPAR yes 118473224
chr1 227936777 227936792 STAT1 JASPAR yes 35884647
chr1 227936777 227936792 STAT1 JASPAR yes 118473225
chr1 227936779 227936790 STAT1 JASPAR yes 35884648
chr1 227936779 227936790 STAT3 JASPAR yes 35884649
chr1 227936779 227936790 STAT1 JASPAR yes 118473226
chr1 227936779 227936790 STAT3 JASPAR yes 118473227
chr1 227936784 227936791 NFATC2 JASPAR yes 35884650
chr1 227936784 227936791 NFATC2 JASPAR yes 118473228
chr1 227936800 227936813 ATF4 JASPAR yes 35884651
chr1 227936800 227936813 ATF4 JASPAR yes 118473229
chr1 227936803 227936809 ATF1 TRANSFAC yes 35884652
chr1 227936803 227936809 ATF1 TRANSFAC yes 118473230
chr1 227936803 227936810 XBP1 TRANSFAC yes 35884653
chr1 227936803 227936810 XBP1 TRANSFAC yes 118473231
chr1 227936833 227936838 GATA2 JASPAR yes 35884654
chr1 227936833 227936838 GATA2 JASPAR yes 118473232
chr1 227936837 227936849 MEF2A JASPAR yes 35884655
chr1 227936837 227936849 MEF2B JASPAR yes 35884656
chr1 227936837 227936849 MEF2D JASPAR yes 35884657
chr1 227936837 227936849 MEF2A JASPAR yes 118473233
chr1 227936837 227936849 MEF2B JASPAR yes 118473234
chr1 227936837 227936849 MEF2D JASPAR yes 118473235
chr1 227936838 227936848 MEF2A JASPAR yes 35884658
chr1 227936838 227936848 MEF2A JASPAR yes 118473236
chr1 227936883 227936895 FOXI1 JASPAR yes 35884659
chr1 227936883 227936895 FOXI1 JASPAR yes 118473237
chr1 227936884 227936895 FOXP2 JASPAR yes 35884660
chr1 227936884 227936895 FOXP2 JASPAR yes 118473238
chr1 227936885 227936893 FOXG1 JASPAR yes 35884661
chr1 227936885 227936893 FOXO3 JASPAR yes 35884662
chr1 227936885 227936893 FOXG1 JASPAR yes 118473239
chr1 227936885 227936893 FOXO3 JASPAR yes 118473240
chr1 227936886 227936896 HOXA13 JASPAR yes 35884663
chr1 227936886 227936896 HOXB13 JASPAR yes 35884664
chr1 227936886 227936896 HOXD13 JASPAR yes 35884665
chr1 227936886 227936896 HOXA13 JASPAR yes 118473241
chr1 227936886 227936896 HOXB13 JASPAR yes 118473242
chr1 227936886 227936896 HOXD13 JASPAR yes 118473243
chr1 227936886 227936897 FOXH1 JASPAR yes 35884666
chr1 227936886 227936897 HOXA10 JASPAR yes 35884667
chr1 227936886 227936897 FOXH1 JASPAR yes 118473244
chr1 227936886 227936897 HOXA10 JASPAR yes 118473245
chr1 227936887 227936896 CDX1 JASPAR yes 35884668
chr1 227936887 227936896 CDX1 JASPAR yes 118473246
chr1 227936887 227936898 CDX2 JASPAR yes 35884669
chr1 227936887 227936898 CDX2 JASPAR yes 118473247
chr1 227936892 227936910 SRF JASPAR yes 35884670
chr1 227936892 227936910 SRF JASPAR yes 118473248
chr1 227936922 227936942 RREB1 JASPAR yes 35884671
chr1 227936922 227936942 RREB1 JASPAR yes 118473249
chr1 227936957 227936968 FOXP2 JASPAR yes 35884672
chr1 227936957 227936968 FOXP2 JASPAR yes 118473250
chr1 227936957 227936971 FOXF2 JASPAR yes 35884673
chr1 227936957 227936971 FOXF2 JASPAR yes 118473251
chr1 227936958 227936966 FOXD1 JASPAR yes 35884674
chr1 227936958 227936966 FOXO3 JASPAR yes 35884675
chr1 227936958 227936966 FOXD1 JASPAR yes 118473252
chr1 227936958 227936966 FOXO3 JASPAR yes 118473253
chr1 227936959 227936966 FOXD2 JASPAR yes 35884676
chr1 227936959 227936966 FOXI1 JASPAR yes 35884677
chr1 227936959 227936966 FOXL1 JASPAR yes 35884678
chr1 227936959 227936966 FOXO4 JASPAR yes 35884679
chr1 227936959 227936966 FOXO6 JASPAR yes 35884680
chr1 227936959 227936966 FOXP3 JASPAR yes 35884681
chr1 227936959 227936966 FOXD2 JASPAR yes 118473254
chr1 227936959 227936966 FOXI1 JASPAR yes 118473255
chr1 227936959 227936966 FOXL1 JASPAR yes 118473256
chr1 227936959 227936966 FOXO4 JASPAR yes 118473257
chr1 227936959 227936966 FOXO6 JASPAR yes 118473258
chr1 227936959 227936966 FOXP3 JASPAR yes 118473259
SNP sites on vista5397[chr1:227936688-227936978]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 227936927 rs200414649 GGT G
CEBPB RREB1
998971
Genes possibly regulated by vista5397[chr1:227936688-227936978]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 227916240 227968927 + SNAP47 ENSG00000143740.10 227916240 0.64 1.0 1907 79552
chr1 227918126 227923112 - JMJD4 ENSG00000081692.8 227923112 0.72 0.99 1908 86424
chr1 228003394 228034171 + PRSS38 ENSG00000185888.5 228003394 0.94 0.0 1909 33584
Expression level of Genes
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miRNAs possibly regulated by vista5397[chr1:227936688-227936978]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results