EnhancerDB
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  3. vista5399[chr1:227976197-227976490]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5399[chr1:227976197-227976490]
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Tissue distribution of vista5399
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Transcription factor that possibly regulate vista5399[chr1:227976197-227976490]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 227976191 227976999 ZNF263 UCSC Txn Factor no Conserved 107876743
chr1 227976192 227976198 ETS1 JASPAR yes 35887191
chr1 227976192 227976198 SPI1 JASPAR yes 35887192
chr1 227976192 227976198 ETS1 JASPAR yes 118473331
chr1 227976192 227976198 SPI1 JASPAR yes 118473332
chr1 227976205 227976220 TFAP2C JASPAR yes 35887193
chr1 227976205 227976220 TFAP2C JASPAR yes 118473333
chr1 227976206 227976218 TFAP2A JASPAR yes 35887194
chr1 227976206 227976218 TFAP2B JASPAR yes 35887195
chr1 227976206 227976218 TFAP2C JASPAR yes 35887196
chr1 227976206 227976218 TFAP2A JASPAR yes 118473334
chr1 227976206 227976218 TFAP2B JASPAR yes 118473335
chr1 227976206 227976218 TFAP2C JASPAR yes 118473336
chr1 227976207 227976216 TFAP2A JASPAR yes 35887197
chr1 227976207 227976216 TFAP2A JASPAR yes 118473337
chr1 227976208 227976217 TFAP2A JASPAR yes 35887198
chr1 227976208 227976217 TFAP2A JASPAR yes 118473338
chr1 227976211 227976218 SP1 TRANSFAC yes 35887199
chr1 227976211 227976218 SP1 TRANSFAC yes 118473339
chr1 227976211 227976221 SP1 JASPAR yes 35887200
chr1 227976211 227976221 SP1 JASPAR yes 118473340
chr1 227976212 227976223 E2F1 JASPAR yes 35887201
chr1 227976212 227976223 E2F1 JASPAR yes 118473341
chr1 227976213 227976218 SP1 TRANSFAC yes 35887202
chr1 227976213 227976218 SP1 TRANSFAC yes 118473342
chr1 227976213 227976224 E2F4 JASPAR yes 35887203
chr1 227976213 227976224 E2F6 JASPAR yes 35887204
chr1 227976213 227976224 E2F4 JASPAR yes 118473343
chr1 227976213 227976224 E2F6 JASPAR yes 118473344
chr1 227976214 227976219 SP1 TRANSFAC yes 35887205
chr1 227976214 227976219 SP1 TRANSFAC yes 118473345
chr1 227976235 227976256 ZNF263 JASPAR yes 35887206
chr1 227976235 227976256 ZNF263 JASPAR yes 118473346
chr1 227976238 227976259 ZNF263 JASPAR yes 35887207
chr1 227976238 227976259 ZNF263 JASPAR yes 118473347
chr1 227976244 227976254 SP1 JASPAR yes 35887208
chr1 227976244 227976254 SP1 JASPAR yes 118473348
chr1 227976245 227976252 CEBPA TRANSFAC yes 35887209
chr1 227976245 227976252 CEBPA TRANSFAC yes 118473349
chr1 227976247 227976257 MZF1 JASPAR yes 35887210
chr1 227976247 227976257 MZF1 JASPAR yes 118473350
chr1 227976255 227976265 GCM2 JASPAR yes 35887211
chr1 227976255 227976265 GCM2 JASPAR yes 118473351
chr1 227976255 227976266 GCM1 JASPAR yes 35887212
chr1 227976255 227976266 GCM1 JASPAR yes 118473352
chr1 227976282 227976295 TFAP2B JASPAR yes 35887213
chr1 227976282 227976295 TFAP2B JASPAR yes 118473353
chr1 227976284 227976290 SP1 TRANSFAC yes 35887214
chr1 227976284 227976290 SP1 TRANSFAC yes 118473354
chr1 227976284 227976295 TFAP2A JASPAR yes 35887215
chr1 227976284 227976295 TFAP2A JASPAR yes 118473355
chr1 227976298 227976313 ZBTB33 JASPAR yes 35887216
chr1 227976298 227976313 ZBTB33 JASPAR yes 118473356
chr1 227976323 227976327 LFA1 TRANSFAC yes 35887217
chr1 227976323 227976327 LFA1 TRANSFAC yes 118473357
chr1 227976330 227976343 TFAP2C JASPAR yes 35887218
chr1 227976330 227976343 TFAP2C JASPAR yes 118473358
chr1 227976335 227976340 SP1 TRANSFAC yes 35887219
chr1 227976335 227976340 SP1 TRANSFAC yes 118473359
chr1 227976347 227976357 ETV6 JASPAR yes 35887220
chr1 227976347 227976357 GABPA JASPAR yes 35887221
chr1 227976347 227976357 ETV6 JASPAR yes 118473360
chr1 227976347 227976357 GABPA JASPAR yes 118473361
chr1 227976349 227976355 ETS1 JASPAR yes 35887222
chr1 227976349 227976355 SPI1 JASPAR yes 35887223
chr1 227976349 227976355 ETS1 JASPAR yes 118473362
chr1 227976349 227976355 SPI1 JASPAR yes 118473363
chr1 227976382 227976387 SP1 TRANSFAC yes 35887224
chr1 227976382 227976387 SP1 TRANSFAC yes 118473364
chr1 227976383 227976393 ZNF740 JASPAR yes 35887225
chr1 227976383 227976393 ZNF740 JASPAR yes 118473365
chr1 227976385 227976406 ZNF263 JASPAR yes 35887226
chr1 227976385 227976406 ZNF263 JASPAR yes 118473366
chr1 227976388 227976394 PEA3 TRANSFAC yes 35887227
chr1 227976388 227976394 PEA3 TRANSFAC yes 118473367
chr1 227976391 227976401 REL JASPAR yes 35887228
chr1 227976391 227976401 REL JASPAR yes 118473368
chr1 227976417 227976425 WT1 TRANSFAC yes 35887229
chr1 227976417 227976425 WT1 TRANSFAC yes 118473369
chr1 227976420 227976426 SP1 TRANSFAC yes 35887230
chr1 227976420 227976426 SP1 TRANSFAC yes 118473370
chr1 227976436 227976454 ESR1 JASPAR yes 35887231
chr1 227976436 227976454 ESR1 JASPAR yes 118473371
chr1 227976449 227976455 ETS1 JASPAR yes 35887232
chr1 227976449 227976455 SPI1 JASPAR yes 35887233
chr1 227976449 227976455 ETS1 JASPAR yes 118473372
chr1 227976449 227976455 SPI1 JASPAR yes 118473373
chr1 227976450 227976471 REST JASPAR yes 35887234
chr1 227976450 227976471 REST JASPAR yes 118473374
chr1 227976451 227976470 REST JASPAR yes 35887235
chr1 227976451 227976470 REST JASPAR yes 118473375
SNP sites on vista5399[chr1:227976197-227976490]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 227976276 rs191777439 G T
ZNF263
999240
chr1 227976398 rs200451667 AC A
REL ZNF263
999241
chr1 227976415 rs374371023 C T
ZNF263
999242
chr1 227976420 rs144519274 C T
SP1 WT1 ZNF263
999243
chr1 227976442 rs140109557 CG C
ESR1 ZNF263
999244
chr1 227976453 rs573403232 C T
ESR1 ETS1 REST SPI1 ZNF263
999245
Genes possibly regulated by vista5399[chr1:227976197-227976490]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 227916240 227968927 + SNAP47 ENSG00000143740.10 227916240 0.64 1.0 1907 40043
chr1 227918126 227923112 - JMJD4 ENSG00000081692.8 227923112 0.72 0.99 1908 46915
chr1 228003394 228034171 + PRSS38 ENSG00000185888.5 228003394 0.94 0.0 1909 73096
Expression level of Genes
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miRNAs possibly regulated by vista5399[chr1:227976197-227976490]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results