EnhancerDB
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  3. vista54[chr1:1952050-1952360]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista54[chr1:1952050-1952360]
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Tissue distribution of vista54
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Transcription factor that possibly regulate vista54[chr1:1952050-1952360]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 1952066 1952087 ZNF263 JASPAR yes 118215675
chr1 1952069 1952090 ZNF263 JASPAR yes 118215676
chr1 1952070 1952091 ZNF263 JASPAR yes 118215677
chr1 1952076 1952082 SOX10 JASPAR yes 118215678
chr1 1952083 1952093 MZF1 JASPAR yes 118215679
chr1 1952086 1952092 SP1 TRANSFAC yes 118215680
chr1 1952086 1952096 SP1 JASPAR yes 118215681
chr1 1952097 1952114 RXRA JASPAR yes 118215682
chr1 1952102 1952109 SPIB JASPAR yes 118215683
chr1 1952103 1952111 EHF JASPAR yes 118215684
chr1 1952121 1952125 LFA1 TRANSFAC yes 118215685
chr1 1952126 1952131 MYC TRANSFAC yes 118215686
chr1 1952131 1952137 ZNF354C JASPAR yes 118215687
chr1 1952144 1952160 RFX3 JASPAR yes 118215688
chr1 1952152 1952157 TFAP2A TRANSFAC yes 118215689
chr1 1952152 1952158 MZF1 JASPAR yes 118215690
chr1 1952155 1952167 PKNOX1 JASPAR yes 118215691
chr1 1952155 1952167 PKNOX2 JASPAR yes 118215692
chr1 1952155 1952167 TGIF1 JASPAR yes 118215693
chr1 1952155 1952167 TGIF2 JASPAR yes 118215694
chr1 1952156 1952166 MSC JASPAR yes 118215695
chr1 1952156 1952166 MYF6 JASPAR yes 118215696
chr1 1952180 1952189 NKX3-2 JASPAR yes 118215697
chr1 1952255 1952260 MYC TRANSFAC yes 118215698
chr1 1952258 1952264 NFIC JASPAR yes 118215699
chr1 1952262 1952282 TP63 JASPAR yes 118215700
chr1 1952263 1952281 TP73 JASPAR yes 118215701
chr1 1952306 1952315 PITX3 JASPAR yes 118215702
chr1 1952306 1952316 GSC2 JASPAR yes 118215703
chr1 1952307 1952315 OTX1 JASPAR yes 118215704
chr1 1952307 1952315 OTX2 JASPAR yes 118215705
chr1 1952313 1952326 ELF3 JASPAR yes 118215706
chr1 1952321 1952329 RHOXF1 JASPAR yes 118215707
chr1 1952321 1952330 PITX3 JASPAR yes 118215708
chr1 1952322 1952337 MEF2A JASPAR yes 118215709
chr1 1952323 1952335 FOXI1 JASPAR yes 118215710
chr1 1952324 1952336 FOXC2 JASPAR yes 118215711
chr1 1952324 1952336 MEF2A JASPAR yes 118215712
chr1 1952324 1952336 MEF2B JASPAR yes 118215713
chr1 1952324 1952336 MEF2D JASPAR yes 118215714
chr1 1952325 1952335 MEF2A JASPAR yes 118215715
chr1 1952325 1952336 FOXB1 JASPAR yes 118215716
chr1 1952325 1952336 FOXC1 JASPAR yes 118215717
chr1 1952326 1952330 YY1 TRANSFAC yes 118215718
chr1 1952335 1952346 ELK4 JASPAR yes 118215719
chr1 1952335 1952346 FLI1 JASPAR yes 118215720
chr1 1952335 1952348 ELF3 JASPAR yes 118215721
chr1 1952336 1952346 ERF JASPAR yes 118215722
chr1 1952336 1952346 ETS1 JASPAR yes 118215723
chr1 1952336 1952346 ETV6 JASPAR yes 118215724
chr1 1952336 1952346 GABPA JASPAR yes 118215725
chr1 1952336 1952347 ELF5 JASPAR yes 118215726
chr1 1952336 1952348 EHF JASPAR yes 118215727
chr1 1952336 1952348 ELF1 JASPAR yes 118215728
chr1 1952336 1952348 ELF4 JASPAR yes 118215729
chr1 1952336 1952349 ELF1 JASPAR yes 118215730
chr1 1952336 1952351 ZIC3 JASPAR yes 118215731
chr1 1952337 1952344 SPI1 JASPAR yes 118215732
chr1 1952337 1952345 EHF JASPAR yes 118215733
chr1 1952337 1952345 FEV JASPAR yes 118215734
chr1 1952342 1952353 STAT1 JASPAR yes 118215735
chr1 1952342 1952353 STAT3 JASPAR yes 118215736
SNP sites on vista54[chr1:1952050-1952360]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista54[chr1:1952050-1952360]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 1853396 1935276 - C1orf222 ENSG00000142609.13 1935276 0.98 1.0 55 83226
chr1 1950780 1962192 + GABRD ENSG00000187730.6 1950780 0.89 1.0 56 98730
chr1 1981909 2116834 + PRKCZ ENSG00000067606.11 1981909 0.87 1.0 57 70451
Expression level of Genes
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miRNAs possibly regulated by vista54[chr1:1952050-1952360]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results