EnhancerDB
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  3. vista540[chr1:17020007-17020088]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista540[chr1:17020007-17020088]
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Tissue distribution of vista540
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Transcription factor that possibly regulate vista540[chr1:17020007-17020088]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 17020063 17020074 E2F1 JASPAR yes 118239697
chr1 17020076 17020088 TFAP2B JASPAR yes 118239698
SNP sites on vista540[chr1:17020007-17020088]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista540[chr1:17020007-17020088]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 16888814 16940057 - NBPF1 ENSG00000219481.6 16940057 0.81 1.0 234 20050
chr1 16999498 17000007 + AL137798.1 ENSG00000237847.2 16999498 0.99 0.0 235 79491
chr1 17060447 17060956 - AL021920.2 ENSG00000268991.1 17060956 0.99 0.0 236 59132
chr1 17066768 17299474 + CROCC ENSG00000058453.12 17066768 0.73 1.0 237 53320
Expression level of Genes
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miRNAs possibly regulated by vista540[chr1:17020007-17020088]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results