EnhancerDB
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  3. vista5401[chr1:227982614-227983033]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5401[chr1:227982614-227983033]
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Tissue distribution of vista5401
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Transcription factor that possibly regulate vista5401[chr1:227982614-227983033]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 227982621 227982636 TFAP2C JASPAR yes 35888078
chr1 227982621 227982636 TFAP2C JASPAR yes 118473383
chr1 227982650 227982660 SP1 JASPAR yes 35888079
chr1 227982650 227982660 SP1 JASPAR yes 118473384
chr1 227982680 227982701 ZNF263 JASPAR yes 35888080
chr1 227982680 227982701 ZNF263 JASPAR yes 118473385
chr1 227982681 227982685 LFA1 TRANSFAC yes 35888081
chr1 227982681 227982685 LFA1 TRANSFAC yes 118473386
chr1 227982695 227982701 PEA3 TRANSFAC yes 35888082
chr1 227982695 227982701 PEA3 TRANSFAC yes 118473387
chr1 227982699 227982711 PROX1 JASPAR yes 35888083
chr1 227982699 227982711 PROX1 JASPAR yes 118473388
chr1 227982716 227982729 ZBTB18 JASPAR yes 35888084
chr1 227982716 227982729 ZBTB18 JASPAR yes 118473389
chr1 227982717 227982729 NHLH1 JASPAR yes 35888085
chr1 227982717 227982729 NHLH1 JASPAR yes 118473390
chr1 227982718 227982728 NHLH1 JASPAR yes 35888086
chr1 227982718 227982728 NHLH1 JASPAR yes 118473391
chr1 227982725 227982735 ZNF740 JASPAR yes 35888087
chr1 227982725 227982735 ZNF740 JASPAR yes 118473392
chr1 227982726 227982731 TFAP2A TRANSFAC yes 35888088
chr1 227982726 227982731 TFAP2A TRANSFAC yes 118473393
chr1 227982726 227982732 MZF1 JASPAR yes 35888089
chr1 227982726 227982732 MZF1 JASPAR yes 118473394
chr1 227982726 227982736 SP1 JASPAR yes 35888090
chr1 227982726 227982736 SP1 JASPAR yes 118473395
chr1 227982728 227982734 MAZ TRANSFAC yes 35888091
chr1 227982728 227982734 MAZ TRANSFAC yes 118473396
chr1 227982733 227982737 LFA1 TRANSFAC yes 35888092
chr1 227982733 227982737 LFA1 TRANSFAC yes 118473397
chr1 227982747 227982752 SP1 TRANSFAC yes 35888093
chr1 227982747 227982752 SP1 TRANSFAC yes 118473398
chr1 227982748 227982753 SP1 TRANSFAC yes 35888094
chr1 227982748 227982753 SP1 TRANSFAC yes 118473399
chr1 227982748 227982754 SP1 TRANSFAC yes 35888095
chr1 227982748 227982754 SP1 TRANSFAC yes 118473400
chr1 227982755 227982770 TFAP2A JASPAR yes 35888096
chr1 227982755 227982770 TFAP2C JASPAR yes 35888097
chr1 227982755 227982770 TFAP2A JASPAR yes 118473401
chr1 227982755 227982770 TFAP2C JASPAR yes 118473402
chr1 227982758 227982769 EBF1 JASPAR yes 35888098
chr1 227982758 227982769 EBF1 JASPAR yes 118473403
chr1 227982758 227982770 TFAP2A JASPAR yes 35888099
chr1 227982758 227982770 TFAP2B JASPAR yes 35888100
chr1 227982758 227982770 TFAP2C JASPAR yes 35888101
chr1 227982758 227982770 TFAP2A JASPAR yes 118473404
chr1 227982758 227982770 TFAP2B JASPAR yes 118473405
chr1 227982758 227982770 TFAP2C JASPAR yes 118473406
chr1 227982759 227982768 TFAP2A JASPAR yes 35888102
chr1 227982759 227982768 TFAP2A JASPAR yes 118473407
chr1 227982760 227982769 TFAP2A JASPAR yes 35888103
chr1 227982760 227982769 TFAP2A JASPAR yes 118473408
chr1 227982765 227982769 LFA1 TRANSFAC yes 35888104
chr1 227982765 227982769 LFA1 TRANSFAC yes 118473409
chr1 227982770 227982774 H4TF2 TRANSFAC yes 35888105
chr1 227982770 227982774 H4TF2 TRANSFAC yes 118473410
chr1 227982809 227982813 LFA1 TRANSFAC yes 35888106
chr1 227982809 227982813 LFA1 TRANSFAC yes 118473411
chr1 227982843 227982855 PKNOX1 JASPAR yes 35888107
chr1 227982843 227982855 PKNOX1 JASPAR yes 118473412
chr1 227982844 227982853 SNAI2 JASPAR yes 35888108
chr1 227982844 227982853 SNAI2 JASPAR yes 118473413
chr1 227982844 227982854 HEY2 JASPAR yes 35888109
chr1 227982844 227982854 ID4 JASPAR yes 35888110
chr1 227982844 227982854 TCF3 JASPAR yes 35888111
chr1 227982844 227982854 TCF4 JASPAR yes 35888112
chr1 227982844 227982854 HEY2 JASPAR yes 118473414
chr1 227982844 227982854 ID4 JASPAR yes 118473415
chr1 227982844 227982854 TCF3 JASPAR yes 118473416
chr1 227982844 227982854 TCF4 JASPAR yes 118473417
chr1 227982857 227982875 RARA JASPAR yes 35888113
chr1 227982857 227982875 RARA JASPAR yes 118473418
chr1 227982887 227982898 NFKB1 JASPAR yes 35888114
chr1 227982887 227982898 NFKB1 JASPAR yes 118473419
chr1 227982892 227982904 INSM1 JASPAR yes 35888115
chr1 227982892 227982904 INSM1 JASPAR yes 118473420
chr1 227982893 227982914 ZNF263 JASPAR yes 35888116
chr1 227982893 227982914 ZNF263 JASPAR yes 118473421
chr1 227982901 227982907 SP1 TRANSFAC yes 35888117
chr1 227982901 227982907 SP1 TRANSFAC yes 118473422
chr1 227982901 227982911 SP1 JASPAR yes 35888118
chr1 227982901 227982911 SP1 JASPAR yes 118473423
chr1 227982920 227982925 SP1 TRANSFAC yes 35888119
chr1 227982920 227982925 SP1 TRANSFAC yes 118473424
chr1 227982920 227982926 SP1 TRANSFAC yes 35888120
chr1 227982920 227982926 SP1 TRANSFAC yes 118473425
chr1 227982920 227982927 SP1 TRANSFAC yes 35888121
chr1 227982920 227982927 SP1 TRANSFAC yes 118473426
chr1 227982921 227982942 ZNF263 JASPAR yes 35888122
chr1 227982921 227982942 ZNF263 JASPAR yes 118473427
chr1 227982922 227982932 ZNF740 JASPAR yes 35888123
chr1 227982922 227982932 ZNF740 JASPAR yes 118473428
chr1 227982924 227982938 PLAG1 JASPAR yes 35888124
chr1 227982924 227982938 PLAG1 JASPAR yes 118473429
chr1 227982924 227982945 ZNF263 JASPAR yes 35888125
chr1 227982924 227982945 ZNF263 JASPAR yes 118473430
chr1 227982925 227982946 ZNF263 JASPAR yes 35888126
chr1 227982925 227982946 ZNF263 JASPAR yes 118473431
chr1 227982927 227982935 SP1 TRANSFAC yes 35888127
chr1 227982927 227982935 SP1 TRANSFAC yes 118473432
chr1 227982932 227982938 SP1 TRANSFAC yes 35888128
chr1 227982932 227982938 SP1 TRANSFAC yes 118473433
chr1 227982932 227982942 SP1 JASPAR yes 35888129
chr1 227982932 227982942 SP1 JASPAR yes 118473434
chr1 227982937 227982958 ZNF263 JASPAR yes 35888130
chr1 227982937 227982958 ZNF263 JASPAR yes 118473435
chr1 227982946 227982957 NFKB1 JASPAR yes 35888131
chr1 227982946 227982957 NFKB1 JASPAR yes 118473436
chr1 227982947 227982958 NFKB1 JASPAR yes 35888132
chr1 227982947 227982958 NFKB1 JASPAR yes 118473437
chr1 227982950 227982970 RREB1 JASPAR yes 35888133
chr1 227982950 227982970 RREB1 JASPAR yes 118473438
chr1 227982951 227982961 ZNF740 JASPAR yes 35888134
chr1 227982951 227982961 ZNF740 JASPAR yes 118473439
chr1 227982953 227982973 RREB1 JASPAR yes 35888135
chr1 227982953 227982973 RREB1 JASPAR yes 118473440
chr1 227982953 227982974 ZNF263 JASPAR yes 35888136
chr1 227982953 227982974 ZNF263 JASPAR yes 118473441
chr1 227982957 227982978 ZNF263 JASPAR yes 35888137
chr1 227982957 227982978 ZNF263 JASPAR yes 118473442
chr1 227982958 227982973 ZIC3 JASPAR yes 35888138
chr1 227982958 227982973 ZIC3 JASPAR yes 118473443
chr1 227982979 227982990 NFKB1 JASPAR yes 35888139
chr1 227982979 227982990 NFKB1 JASPAR yes 118473444
chr1 227982983 227983004 ZNF263 JASPAR yes 35888140
chr1 227982983 227983004 ZNF263 JASPAR yes 118473445
chr1 227982984 227982999 NR2C2 JASPAR yes 35888141
chr1 227982984 227982999 NR2C2 JASPAR yes 118473446
chr1 227982986 227983000 PLAG1 JASPAR yes 35888142
chr1 227982986 227983000 PLAG1 JASPAR yes 118473447
chr1 227982986 227983006 RREB1 JASPAR yes 35888143
chr1 227982986 227983006 RREB1 JASPAR yes 118473448
chr1 227982986 227983007 ZNF263 JASPAR yes 35888144
chr1 227982986 227983007 ZNF263 JASPAR yes 118473449
chr1 227982987 227983008 ZNF263 JASPAR yes 35888145
chr1 227982987 227983008 ZNF263 JASPAR yes 118473450
chr1 227982988 227982998 SP1 JASPAR yes 35888146
chr1 227982988 227982998 SP1 JASPAR yes 118473451
chr1 227982990 227983000 ZNF740 JASPAR yes 35888147
chr1 227982990 227983000 ZNF740 JASPAR yes 118473452
chr1 227982994 227983000 SP1 TRANSFAC yes 35888148
chr1 227982994 227983000 SP1 TRANSFAC yes 118473453
chr1 227982994 227983004 SP1 JASPAR yes 35888149
chr1 227982994 227983004 SP1 JASPAR yes 118473454
chr1 227983008 227983019 NFKB1 JASPAR yes 35888150
chr1 227983008 227983019 NFKB1 JASPAR yes 118473455
chr1 227983014 227983020 MZF1 JASPAR yes 35888151
chr1 227983014 227983020 MZF1 JASPAR yes 118473456
chr1 227983015 227983036 ZNF263 JASPAR yes 35888152
chr1 227983015 227983036 ZNF263 JASPAR yes 118473457
chr1 227983023 227983037 SPI1 JASPAR yes 35888153
chr1 227983023 227983037 SPI1 JASPAR yes 118473458
SNP sites on vista5401[chr1:227982614-227983033]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 227982726 rs113636050 G T
MZF1 NHLH1 SP1 TFAP2A ZBTB18 ZNF740
999327
chr1 227982730 rs181047303 G A,C
MAZ MZF1 SP1 TFAP2A ZNF740
999328
chr1 227982752 rs115372206 G A
SP1
999329
chr1 227982936 rs112364957 C T
PLAG1 SP1 ZNF263
999330
chr1 227982968 rs12123959 C G
RREB1 ZIC3 ZNF263
999331
Genes possibly regulated by vista5401[chr1:227982614-227983033]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 227916240 227968927 + SNAP47 ENSG00000143740.10 227916240 0.64 1.0 1907 33626
chr1 227918126 227923112 - JMJD4 ENSG00000081692.8 227923112 0.72 0.99 1908 40498
chr1 228003394 228034171 + PRSS38 ENSG00000185888.5 228003394 0.94 0.0 1909 79639
Expression level of Genes
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miRNAs possibly regulated by vista5401[chr1:227982614-227983033]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results