EnhancerDB
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  3. vista5406[chr1:228124828-228124930]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5406[chr1:228124828-228124930]
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Tissue distribution of vista5406
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Transcription factor that possibly regulate vista5406[chr1:228124828-228124930]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 228124813 228124834 ZNF263 JASPAR yes 35895713
chr1 228124813 228124834 ZNF263 JASPAR yes 118473614
chr1 228124816 228124830 SPIC JASPAR yes 35895715
chr1 228124816 228124830 SPIC JASPAR yes 118473615
chr1 228124822 228124843 ZNF263 JASPAR yes 35895716
chr1 228124822 228124843 ZNF263 JASPAR yes 118473616
chr1 228124842 228124846 YY1 TRANSFAC yes 35895717
chr1 228124842 228124846 YY1 TRANSFAC yes 118473617
chr1 228124849 228124859 NFATC3 JASPAR yes 35895718
chr1 228124849 228124859 NFATC3 JASPAR yes 118473618
chr1 228124850 228124857 NFATC2 JASPAR yes 35895719
chr1 228124850 228124857 NFATC2 JASPAR yes 118473619
chr1 228124861 228124872 NFE2L2 JASPAR yes 35895720
chr1 228124861 228124872 NFE2L2 JASPAR yes 118473620
chr1 228124864 228124870 ESR1 TRANSFAC yes 35895721
chr1 228124864 228124870 ESR1 TRANSFAC yes 118473621
chr1 228124866 228124870 ESR1 TRANSFAC yes 35895722
chr1 228124866 228124870 ESR1 TRANSFAC yes 118473622
chr1 228124870 228124885 RUNX2 JASPAR yes 35895723
chr1 228124870 228124885 RUNX2 JASPAR yes 118473623
chr1 228124873 228124879 SOX10 JASPAR yes 35895724
chr1 228124873 228124879 SOX10 JASPAR yes 118473624
chr1 228124873 228124884 RUNX1 JASPAR yes 35895725
chr1 228124873 228124884 RUNX1 JASPAR yes 118473625
chr1 228124874 228124884 RUNX3 JASPAR yes 35895726
chr1 228124874 228124884 RUNX3 JASPAR yes 118473626
chr1 228124875 228124884 RUNX2 JASPAR yes 35895727
chr1 228124875 228124884 RUNX2 JASPAR yes 118473627
chr1 228124897 228124903 YY1 JASPAR yes 35895728
chr1 228124897 228124903 YY1 JASPAR yes 118473628
chr1 228124901 228124907 MZF1 JASPAR yes 35895729
chr1 228124901 228124907 MZF1 JASPAR yes 118473629
chr1 228124913 228124918 ETS2 TRANSFAC yes 35895730
chr1 228124913 228124918 ETS2 TRANSFAC yes 118473630
chr1 228124915 228124923 EHF JASPAR yes 35895731
chr1 228124915 228124923 EHF JASPAR yes 118473631
SNP sites on vista5406[chr1:228124828-228124930]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 228124926 rs187502520 G A no 1000212
Genes possibly regulated by vista5406[chr1:228124828-228124930]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 228106357 228135599 - WNT9A ENSG00000143816.7 228135599 0.82 1.0 1910 89331
chr1 228194752 228248961 + WNT3A ENSG00000154342.4 228194752 0.98 1.0 1911 30178
Expression level of Genes
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miRNAs possibly regulated by vista5406[chr1:228124828-228124930]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results