EnhancerDB
  1. Home
  2. Enhancers
  3. vista5407[chr1:228272073-228272409]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5407[chr1:228272073-228272409]
Back to top
Tissue distribution of vista5407
Back to top
Transcription factor that possibly regulate vista5407[chr1:228272073-228272409]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 228269188 228272435 POLR2A UCSC Txn Factor no Conserved 107876843
chr1 228272168 228272455 CEBPB UCSC Txn Factor no Conserved 107876855
chr1 228272065 228272077 PKNOX2 JASPAR yes 35899991
chr1 228272065 228272077 PKNOX2 JASPAR yes 118473632
chr1 228272083 228272088 GATA1 TRANSFAC yes 35899992
chr1 228272083 228272088 GATA1 TRANSFAC yes 118473633
chr1 228272088 228272103 MEF2C JASPAR yes 35899993
chr1 228272088 228272103 MEF2C JASPAR yes 118473634
chr1 228272134 228272147 TFAP2A JASPAR yes 35899994
chr1 228272134 228272147 TFAP2B JASPAR yes 35899995
chr1 228272134 228272147 TFAP2C JASPAR yes 35899996
chr1 228272134 228272147 TFAP2A JASPAR yes 118473635
chr1 228272134 228272147 TFAP2B JASPAR yes 118473636
chr1 228272134 228272147 TFAP2C JASPAR yes 118473637
chr1 228272148 228272163 IRF9 JASPAR yes 35899997
chr1 228272148 228272163 IRF9 JASPAR yes 118473638
chr1 228272163 228272180 RXRA JASPAR yes 35899998
chr1 228272163 228272180 RXRA JASPAR yes 118473639
chr1 228272180 228272190 MYF6 JASPAR yes 35899999
chr1 228272180 228272190 MYF6 JASPAR yes 118473640
chr1 228272182 228272187 MYC TRANSFAC yes 35900000
chr1 228272182 228272187 MYC TRANSFAC yes 118473641
chr1 228272195 228272207 NHLH1 JASPAR yes 35900001
chr1 228272195 228272207 NHLH1 JASPAR yes 118473642
chr1 228272196 228272206 MSC JASPAR yes 35900002
chr1 228272196 228272206 NHLH1 JASPAR yes 35900003
chr1 228272196 228272206 TFAP4 JASPAR yes 35900004
chr1 228272196 228272206 MSC JASPAR yes 118473643
chr1 228272196 228272206 NHLH1 JASPAR yes 118473644
chr1 228272196 228272206 TFAP4 JASPAR yes 118473645
chr1 228272196 228272210 JUN JASPAR yes 35900005
chr1 228272196 228272210 JUN JASPAR yes 118473646
chr1 228272199 228272210 NFE2L2 JASPAR yes 35900006
chr1 228272199 228272210 NFE2L2 JASPAR yes 118473647
chr1 228272200 228272211 FOS JASPAR yes 35900007
chr1 228272200 228272211 FOSL1 JASPAR yes 35900008
chr1 228272200 228272211 JUND JASPAR yes 35900009
chr1 228272200 228272211 FOS JASPAR yes 118473648
chr1 228272200 228272211 FOSL1 JASPAR yes 118473649
chr1 228272200 228272211 JUND JASPAR yes 118473650
chr1 228272201 228272212 FOSL2 JASPAR yes 35900010
chr1 228272201 228272212 JUNB JASPAR yes 35900011
chr1 228272201 228272212 FOSL2 JASPAR yes 118473651
chr1 228272201 228272212 JUNB JASPAR yes 118473652
chr1 228272201 228272215 JUN JASPAR yes 35900012
chr1 228272201 228272215 JUN JASPAR yes 118473653
chr1 228272226 228272238 IRF1 JASPAR yes 35900013
chr1 228272226 228272238 IRF1 JASPAR yes 118473654
chr1 228272233 228272245 GRHL1 JASPAR yes 35900014
chr1 228272233 228272245 GRHL1 JASPAR yes 118473655
chr1 228272234 228272244 TFCP2 JASPAR yes 35900015
chr1 228272234 228272244 TFCP2 JASPAR yes 118473656
chr1 228272255 228272269 SPI1 JASPAR yes 35900016
chr1 228272255 228272269 SPI1 JASPAR yes 118473657
chr1 228272272 228272282 TFE3 JASPAR yes 35900017
chr1 228272272 228272282 TFEB JASPAR yes 35900018
chr1 228272272 228272282 TFEC JASPAR yes 35900019
chr1 228272272 228272282 TFE3 JASPAR yes 118473658
chr1 228272272 228272282 TFEB JASPAR yes 118473659
chr1 228272272 228272282 TFEC JASPAR yes 118473660
chr1 228272272 228272283 USF2 JASPAR yes 35900020
chr1 228272272 228272283 USF2 JASPAR yes 118473661
chr1 228272273 228272283 MAX JASPAR yes 35900021
chr1 228272273 228272283 MAX JASPAR yes 118473662
chr1 228272295 228272308 SCRT2 JASPAR yes 35900022
chr1 228272295 228272308 SCRT2 JASPAR yes 118473663
chr1 228272300 228272311 CEBPB JASPAR yes 35900023
chr1 228272300 228272311 CEBPB JASPAR yes 118473664
chr1 228272301 228272311 CEBPB JASPAR yes 35900024
chr1 228272301 228272311 CEBPD JASPAR yes 35900025
chr1 228272301 228272311 CEBPE JASPAR yes 35900026
chr1 228272301 228272311 CEBPG JASPAR yes 35900027
chr1 228272301 228272311 CEBPB JASPAR yes 118473665
chr1 228272301 228272311 CEBPD JASPAR yes 118473666
chr1 228272301 228272311 CEBPE JASPAR yes 118473667
chr1 228272301 228272311 CEBPG JASPAR yes 118473668
chr1 228272301 228272312 CEBPA JASPAR yes 35900028
chr1 228272301 228272312 CEBPA JASPAR yes 118473669
chr1 228272346 228272352 NFE2 TRANSFAC yes 35900029
chr1 228272346 228272352 NFE2 TRANSFAC yes 118473670
chr1 228272388 228272392 YY1 TRANSFAC yes 35900030
chr1 228272388 228272392 YY1 TRANSFAC yes 118473671
chr1 228272388 228272401 NR2F1 JASPAR yes 35900031
chr1 228272388 228272401 NR2F1 JASPAR yes 118473672
chr1 228272390 228272408 IRF2 JASPAR yes 35900032
chr1 228272390 228272408 IRF2 JASPAR yes 118473673
chr1 228272391 228272399 NR4A2 JASPAR yes 35900033
chr1 228272391 228272399 NR4A2 JASPAR yes 118473674
chr1 228272391 228272412 IRF1 JASPAR yes 35900034
chr1 228272391 228272412 IRF1 JASPAR yes 118473675
chr1 228272392 228272406 RXRG JASPAR yes 35900035
chr1 228272392 228272406 RXRG JASPAR yes 118473676
chr1 228272393 228272408 PRDM1 JASPAR yes 35900036
chr1 228272393 228272408 STAT2 JASPAR yes 35900037
chr1 228272393 228272408 PRDM1 JASPAR yes 118473677
chr1 228272393 228272408 STAT2 JASPAR yes 118473678
chr1 228272395 228272407 IRF1 JASPAR yes 35900038
chr1 228272395 228272407 IRF1 JASPAR yes 118473679
chr1 228272400 228272404 YY1 TRANSFAC yes 35900039
chr1 228272400 228272404 YY1 TRANSFAC yes 118473680
SNP sites on vista5407[chr1:228272073-228272409]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 228272155 rs3754359 G A
IRF9 POLR2A
1001030
chr1 228272269 rs78593148 G A
CEBPB POLR2A SPI1
1001031
Genes possibly regulated by vista5407[chr1:228272073-228272409]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 228194752 228248961 + WNT3A ENSG00000154342.4 228194752 0.98 1.0 1911 22679
chr1 228270361 228286912 + ARF1 ENSG00000143761.9 228270361 0.54 1.0 1912 98288
chr1 228288427 228293112 - C1orf35 ENSG00000143793.8 228293112 0.58 1.0 1913 79297
chr1 228294380 228297013 - MRPL55 ENSG00000162910.14 228297013 0.69 1.0 1914 75396
chr1 228327663 228336685 + GUK1 ENSG00000143774.12 228327663 0.7 1.0 1915 44746
chr1 228337553 228347527 + GJC2 ENSG00000198835.3 228337553 0.86 0.99 1916 34856
chr1 228351787 228353213 - IBA57-AS1 ENSG00000203684.5 228353213 0.86 1.0 1917 19196
chr1 228353516 228369958 + IBA57 ENSG00000181873.8 228353516 0.62 1.0 1918 18893
Expression level of Genes
Back to top
miRNAs possibly regulated by vista5407[chr1:228272073-228272409]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results