EnhancerDB
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  3. vista5408[chr1:228273480-228273740]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5408[chr1:228273480-228273740]
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Tissue distribution of vista5408
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Transcription factor that possibly regulate vista5408[chr1:228273480-228273740]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 228273444 228273708 CEBPB UCSC Txn Factor no Conserved 107876878
chr1 228273507 228273518 FOXH1 JASPAR yes 35900171
chr1 228273507 228273518 FOXH1 JASPAR yes 118473681
chr1 228273510 228273521 BATF JASPAR yes 35900172
chr1 228273510 228273521 BATF JASPAR yes 118473682
chr1 228273526 228273530 YY1 TRANSFAC yes 35900173
chr1 228273526 228273530 YY1 TRANSFAC yes 118473683
chr1 228273527 228273538 STAT3 JASPAR yes 35900174
chr1 228273527 228273538 STAT3 JASPAR yes 118473684
chr1 228273529 228273540 ELF5 JASPAR yes 35900175
chr1 228273529 228273540 ELF5 JASPAR yes 118473685
chr1 228273530 228273541 FLI1 JASPAR yes 35900176
chr1 228273530 228273541 FLI1 JASPAR yes 118473686
chr1 228273531 228273539 EHF JASPAR yes 35900177
chr1 228273531 228273539 FEV JASPAR yes 35900178
chr1 228273531 228273539 EHF JASPAR yes 118473687
chr1 228273531 228273539 FEV JASPAR yes 118473688
chr1 228273532 228273539 SPI1 JASPAR yes 35900179
chr1 228273532 228273539 SPI1 JASPAR yes 118473689
chr1 228273553 228273564 FOXH1 JASPAR yes 35900180
chr1 228273553 228273564 FOXH1 JASPAR yes 118473690
chr1 228273554 228273560 ZNF354C JASPAR yes 35900181
chr1 228273554 228273560 ZNF354C JASPAR yes 118473691
chr1 228273557 228273568 CEBPB JASPAR yes 35900182
chr1 228273557 228273568 CEBPB JASPAR yes 118473692
chr1 228273558 228273568 CEBPB JASPAR yes 35900183
chr1 228273558 228273568 CEBPD JASPAR yes 35900184
chr1 228273558 228273568 CEBPE JASPAR yes 35900185
chr1 228273558 228273568 CEBPB JASPAR yes 118473693
chr1 228273558 228273568 CEBPD JASPAR yes 118473694
chr1 228273558 228273568 CEBPE JASPAR yes 118473695
chr1 228273558 228273569 CEBPA JASPAR yes 35900186
chr1 228273558 228273569 CEBPA JASPAR yes 118473696
chr1 228273565 228273573 FOXL1 JASPAR yes 35900187
chr1 228273565 228273573 FOXL1 JASPAR yes 118473697
chr1 228273586 228273597 ELK4 JASPAR yes 35900188
chr1 228273586 228273597 FLI1 JASPAR yes 35900189
chr1 228273586 228273597 ELK4 JASPAR yes 118473698
chr1 228273586 228273597 FLI1 JASPAR yes 118473699
chr1 228273587 228273591 YY1 TRANSFAC yes 35900190
chr1 228273587 228273591 YY1 TRANSFAC yes 118473700
chr1 228273587 228273599 ELF1 JASPAR yes 35900191
chr1 228273587 228273599 ELF1 JASPAR yes 118473701
chr1 228273587 228273600 ELF1 JASPAR yes 35900192
chr1 228273587 228273600 ELF1 JASPAR yes 118473702
chr1 228273588 228273596 FEV JASPAR yes 35900193
chr1 228273588 228273596 FEV JASPAR yes 118473703
chr1 228273608 228273618 RELA JASPAR yes 35900194
chr1 228273608 228273618 REL JASPAR yes 35900195
chr1 228273608 228273618 RELA JASPAR yes 118473704
chr1 228273608 228273618 REL JASPAR yes 118473705
chr1 228273621 228273635 BATF3 JASPAR yes 35900196
chr1 228273621 228273635 BATF3 JASPAR yes 118473706
chr1 228273640 228273650 EMX1 JASPAR yes 35900197
chr1 228273640 228273650 HOXB3 JASPAR yes 35900198
chr1 228273640 228273650 NOTO JASPAR yes 35900199
chr1 228273640 228273650 EMX1 JASPAR yes 118473707
chr1 228273640 228273650 HOXB3 JASPAR yes 118473708
chr1 228273640 228273650 NOTO JASPAR yes 118473709
chr1 228273641 228273651 POU6F2 JASPAR yes 35900200
chr1 228273641 228273651 POU6F2 JASPAR yes 118473710
chr1 228273660 228273671 NFKB1 JASPAR yes 35900201
chr1 228273660 228273671 NFKB1 JASPAR yes 118473711
chr1 228273661 228273665 LFA1 TRANSFAC yes 35900202
chr1 228273661 228273665 LFA1 TRANSFAC yes 118473712
chr1 228273661 228273671 NFKB1 JASPAR yes 35900203
chr1 228273661 228273671 NFKB1 JASPAR yes 118473713
chr1 228273710 228273718 OTX2 JASPAR yes 35900204
chr1 228273710 228273718 OTX2 JASPAR yes 118473714
chr1 228273737 228273741 H1TF2 TRANSFAC yes 35900205
chr1 228273737 228273741 NFE TRANSFAC yes 35900206
chr1 228273737 228273741 SRF TRANSFAC yes 35900207
chr1 228273737 228273741 H1TF2 TRANSFAC yes 118473715
chr1 228273737 228273741 NFE TRANSFAC yes 118473716
chr1 228273737 228273741 SRF TRANSFAC yes 118473717
SNP sites on vista5408[chr1:228273480-228273740]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 228273489 rs190956243 A G
CEBPB
1001042
chr1 228273574 rs74140919 T C
CEBPB
1001043
chr1 228273634 rs115388234 T C
BATF3 CEBPB
1001044
Genes possibly regulated by vista5408[chr1:228273480-228273740]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 228194752 228248961 + WNT3A ENSG00000154342.4 228194752 0.98 1.0 1911 21272
chr1 228270361 228286912 + ARF1 ENSG00000143761.9 228270361 0.54 1.0 1912 96881
chr1 228288427 228293112 - C1orf35 ENSG00000143793.8 228293112 0.58 1.0 1913 80628
chr1 228294380 228297013 - MRPL55 ENSG00000162910.14 228297013 0.69 1.0 1914 76727
chr1 228327663 228336685 + GUK1 ENSG00000143774.12 228327663 0.7 1.0 1915 46077
chr1 228337553 228347527 + GJC2 ENSG00000198835.3 228337553 0.86 0.99 1916 36187
chr1 228351787 228353213 - IBA57-AS1 ENSG00000203684.5 228353213 0.86 1.0 1917 20527
chr1 228353516 228369958 + IBA57 ENSG00000181873.8 228353516 0.62 1.0 1918 20224
Expression level of Genes
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miRNAs possibly regulated by vista5408[chr1:228273480-228273740]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results