EnhancerDB
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  3. vista5414[chr1:228634060-228634141]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5414[chr1:228634060-228634141]
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Tissue distribution of vista5414
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Transcription factor that possibly regulate vista5414[chr1:228634060-228634141]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 228634060 228634064 YY1 TRANSFAC yes 35912364
chr1 228634060 228634064 YY1 TRANSFAC yes 118473941
chr1 228634076 228634085 SP1 TRANSFAC yes 35912365
chr1 228634076 228634085 SP1 TRANSFAC yes 118473942
chr1 228634078 228634085 SP1 TRANSFAC yes 35912366
chr1 228634078 228634085 SP1 TRANSFAC yes 118473943
chr1 228634079 228634084 SP1 TRANSFAC yes 35912367
chr1 228634079 228634084 SP1 TRANSFAC yes 118473944
chr1 228634079 228634085 SP1 TRANSFAC yes 35912368
chr1 228634079 228634085 SP1 TRANSFAC yes 118473945
chr1 228634107 228634117 ELK1 JASPAR yes 35912369
chr1 228634107 228634117 ELK1 JASPAR yes 118473946
chr1 228634108 228634119 ETV2 JASPAR yes 35912370
chr1 228634108 228634119 ETV2 JASPAR yes 118473947
chr1 228634109 228634119 ERF JASPAR yes 35912371
chr1 228634109 228634119 ERG JASPAR yes 35912372
chr1 228634109 228634119 ETS1 JASPAR yes 35912373
chr1 228634109 228634119 FLI1 JASPAR yes 35912374
chr1 228634109 228634119 ERF JASPAR yes 118473948
chr1 228634109 228634119 ERG JASPAR yes 118473949
chr1 228634109 228634119 ETS1 JASPAR yes 118473950
chr1 228634109 228634119 FLI1 JASPAR yes 118473951
chr1 228634109 228634120 ELK4 JASPAR yes 35912375
chr1 228634109 228634120 FLI1 JASPAR yes 35912376
chr1 228634109 228634120 ELK4 JASPAR yes 118473952
chr1 228634109 228634120 FLI1 JASPAR yes 118473953
chr1 228634111 228634117 ETS1 JASPAR yes 35912377
chr1 228634111 228634117 ETS1 JASPAR yes 118473954
SNP sites on vista5414[chr1:228634060-228634141]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 228634067 rs187308220 C T no 1002599
chr1 228634078 rs147080955 ACCCG A
SP1
1002600
chr1 228634078 rs201797168 ACCCG A
SP1
1002601
chr1 228634078 rs774756407 ACCCG A
SP1
1002602
Genes possibly regulated by vista5414[chr1:228634060-228634141]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 228581374 228594541 - TRIM11 ENSG00000154370.9 228594541 0.68 1.0 1921 60481
chr1 228595641 228604562 - TRIM17 ENSG00000162931.7 228604562 0.89 1.0 1922 70502
chr1 228612546 228613026 - HIST3H3 ENSG00000168148.3 228613026 0.84 0.89 1923 78966
chr1 228645065 228645560 - HIST3H2A ENSG00000181218.4 228645560 0.89 0.99 1924 88581
chr1 228645808 228646259 + HIST3H2BB ENSG00000196890.3 228645808 0.92 0.96 1925 88333
chr1 228674762 228683467 + RNF187 ENSG00000168159.9 228674762 0.68 1.0 1926 59379
Expression level of Genes
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miRNAs possibly regulated by vista5414[chr1:228634060-228634141]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr1 228649826 228649846 + hsa-miR-4666a-3p MIMAT0019742 228645803 0.010490869058412122 0.0 0.0 129
Expression level of miRNAs
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