EnhancerDB
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  3. vista5418[chr1:228686214-228686407]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5418[chr1:228686214-228686407]
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Tissue distribution of vista5418
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Transcription factor that possibly regulate vista5418[chr1:228686214-228686407]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 228686208 228686222 GATA2 JASPAR yes 35916159
chr1 228686208 228686222 GATA2 JASPAR yes 118474100
chr1 228686210 228686218 GATA3 JASPAR yes 35916160
chr1 228686210 228686218 GATA3 JASPAR yes 118474101
chr1 228686216 228686231 TFAP2A JASPAR yes 35916161
chr1 228686216 228686231 TFAP2A JASPAR yes 118474102
chr1 228686219 228686231 INSM1 JASPAR yes 35916162
chr1 228686219 228686231 INSM1 JASPAR yes 118474103
chr1 228686221 228686241 PPARG JASPAR yes 35916163
chr1 228686221 228686241 PPARG JASPAR yes 118474104
chr1 228686222 228686242 PPARG JASPAR yes 35916164
chr1 228686222 228686242 PPARG JASPAR yes 118474105
chr1 228686224 228686229 SP1 TRANSFAC yes 35916165
chr1 228686224 228686229 SP1 TRANSFAC yes 118474106
chr1 228686224 228686236 YY1 JASPAR yes 35916166
chr1 228686224 228686236 YY1 JASPAR yes 118474107
chr1 228686229 228686233 YY1 TRANSFAC yes 35916167
chr1 228686229 228686233 YY1 TRANSFAC yes 118474108
chr1 228686243 228686247 YY1 TRANSFAC yes 35916168
chr1 228686243 228686247 YY1 TRANSFAC yes 118474109
chr1 228686250 228686253 MYB TRANSFAC yes 35916169
chr1 228686250 228686253 MYB TRANSFAC yes 118474110
chr1 228686265 228686269 YY1 TRANSFAC yes 35916170
chr1 228686265 228686269 YY1 TRANSFAC yes 118474111
chr1 228686277 228686284 MEIS1 JASPAR yes 35916171
chr1 228686277 228686284 MEIS1 JASPAR yes 118474112
chr1 228686277 228686285 MEIS2 JASPAR yes 35916172
chr1 228686277 228686285 MEIS3 JASPAR yes 35916173
chr1 228686277 228686285 MEIS2 JASPAR yes 118474113
chr1 228686277 228686285 MEIS3 JASPAR yes 118474114
chr1 228686292 228686296 TEAD2 TRANSFAC yes 35916174
chr1 228686292 228686296 TEAD2 TRANSFAC yes 118474115
chr1 228686311 228686315 YY1 TRANSFAC yes 35916175
chr1 228686311 228686315 YY1 TRANSFAC yes 118474116
chr1 228686318 228686321 MYB TRANSFAC yes 35916176
chr1 228686318 228686321 MYB TRANSFAC yes 118474117
chr1 228686330 228686340 GSX1 JASPAR yes 35916177
chr1 228686330 228686340 GSX2 JASPAR yes 35916178
chr1 228686330 228686340 GSX1 JASPAR yes 118474118
chr1 228686330 228686340 GSX2 JASPAR yes 118474119
chr1 228686331 228686339 LMX1A JASPAR yes 35916179
chr1 228686331 228686339 LMX1B JASPAR yes 35916180
chr1 228686331 228686339 NKX6-1 JASPAR yes 35916181
chr1 228686331 228686339 NKX6-2 JASPAR yes 35916182
chr1 228686331 228686339 VAX1 JASPAR yes 35916183
chr1 228686331 228686339 VAX2 JASPAR yes 35916184
chr1 228686331 228686339 VSX1 JASPAR yes 35916185
chr1 228686331 228686339 VSX2 JASPAR yes 35916186
chr1 228686331 228686339 LMX1A JASPAR yes 118474120
chr1 228686331 228686339 LMX1B JASPAR yes 118474121
chr1 228686331 228686339 NKX6-1 JASPAR yes 118474122
chr1 228686331 228686339 NKX6-2 JASPAR yes 118474123
chr1 228686331 228686339 VAX1 JASPAR yes 118474124
chr1 228686331 228686339 VAX2 JASPAR yes 118474125
chr1 228686331 228686339 VSX1 JASPAR yes 118474126
chr1 228686331 228686339 VSX2 JASPAR yes 118474127
chr1 228686343 228686353 POU6F2 JASPAR yes 35916187
chr1 228686343 228686353 POU6F2 JASPAR yes 118474128
chr1 228686360 228686380 RREB1 JASPAR yes 35916188
chr1 228686360 228686380 RREB1 JASPAR yes 118474129
chr1 228686364 228686384 RREB1 JASPAR yes 35916189
chr1 228686364 228686384 RREB1 JASPAR yes 118474130
chr1 228686365 228686385 RREB1 JASPAR yes 35916190
chr1 228686365 228686385 RREB1 JASPAR yes 118474131
chr1 228686366 228686386 RREB1 JASPAR yes 35916191
chr1 228686366 228686386 RREB1 JASPAR yes 118474132
chr1 228686368 228686373 SP1 TRANSFAC yes 35916192
chr1 228686368 228686373 SP1 TRANSFAC yes 118474133
chr1 228686375 228686385 SP1 JASPAR yes 35916193
chr1 228686375 228686385 SP1 JASPAR yes 118474134
chr1 228686376 228686384 SP1 TRANSFAC yes 35916194
chr1 228686376 228686384 SP1 TRANSFAC yes 118474135
chr1 228686377 228686382 SP1 TRANSFAC yes 35916195
chr1 228686377 228686382 SP1 TRANSFAC yes 118474136
chr1 228686378 228686383 SP1 TRANSFAC yes 35916196
chr1 228686378 228686383 SP1 TRANSFAC yes 118474137
chr1 228686378 228686384 SP1 TRANSFAC yes 35916197
chr1 228686378 228686384 SP1 TRANSFAC yes 118474138
chr1 228686380 228686400 RREB1 JASPAR yes 35916198
chr1 228686380 228686400 RREB1 JASPAR yes 118474139
chr1 228686385 228686405 RREB1 JASPAR yes 35916199
chr1 228686385 228686405 RREB1 JASPAR yes 118474140
chr1 228686392 228686397 SP1 TRANSFAC yes 35916200
chr1 228686392 228686397 SP1 TRANSFAC yes 118474141
chr1 228686393 228686398 SP1 TRANSFAC yes 35916201
chr1 228686393 228686398 SP1 TRANSFAC yes 118474142
chr1 228686400 228686405 SP1 TRANSFAC yes 35916202
chr1 228686400 228686405 SP1 TRANSFAC yes 118474143
SNP sites on vista5418[chr1:228686214-228686407]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 228686238 rs186163382 C T
PPARG
1003060
Genes possibly regulated by vista5418[chr1:228686214-228686407]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 228581374 228594541 - TRIM11 ENSG00000154370.9 228594541 0.68 1.0 1921 8327
chr1 228595641 228604562 - TRIM17 ENSG00000162931.7 228604562 0.89 1.0 1922 18348
chr1 228612546 228613026 - HIST3H3 ENSG00000168148.3 228613026 0.84 0.89 1923 26812
chr1 228645065 228645560 - HIST3H2A ENSG00000181218.4 228645560 0.89 0.99 1924 59346
chr1 228645808 228646259 + HIST3H2BB ENSG00000196890.3 228645808 0.92 0.96 1925 59594
chr1 228674762 228683467 + RNF187 ENSG00000168159.9 228674762 0.68 1.0 1926 88548
Expression level of Genes
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miRNAs possibly regulated by vista5418[chr1:228686214-228686407]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results