EnhancerDB

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chrom.	Start	End	TF Name	Source	Predicted site?	Tissue/Cell line	id
chr1	228688562	228689003	MAX	UCSC Txn Factor	no	Conserved	107877076
chr1	228688564	228689078	MYC	UCSC Txn Factor	no	Conserved	107877077
chr1	228688588	228689030	CTCF	UCSC Txn Factor	no	Conserved	107877085
chr1	228688667	228688997	BHLHE40	UCSC Txn Factor	no	Conserved	107877100
chr1	228688671	228688951	RAD21	UCSC Txn Factor	no	Conserved	107877103
chr1	228688761	228689043	RUNX3	UCSC Txn Factor	no	Conserved	107877133
chr1	228688607	228688610	MYB	TRANSFAC	yes		35916567
chr1	228688607	228688610	MYB	TRANSFAC	yes		118474144
chr1	228688657	228688675	TP73	JASPAR	yes		35916568
chr1	228688657	228688675	TP73	JASPAR	yes		118474145
chr1	228688659	228688674	TP53	JASPAR	yes		35916569
chr1	228688659	228688674	TP53	JASPAR	yes		118474146
chr1	228688664	228688674	MAX	JASPAR	yes		35916570
chr1	228688664	228688674	MAX	JASPAR	yes		118474147
chr1	228688684	228688697	SCRT2	JASPAR	yes		35916571
chr1	228688684	228688697	SCRT2	JASPAR	yes		118474148
chr1	228688684	228688699	SCRT1	JASPAR	yes		35916572
chr1	228688684	228688699	SCRT1	JASPAR	yes		118474149
chr1	228688686	228688706	ESR1	JASPAR	yes		35916573
chr1	228688686	228688706	ESR1	JASPAR	yes		118474150
chr1	228688689	228688707	ESR2	JASPAR	yes		35916574
chr1	228688689	228688707	ESR2	JASPAR	yes		118474151
chr1	228688691	228688706	ESR2	JASPAR	yes		35916575
chr1	228688691	228688706	ESR2	JASPAR	yes		118474152
chr1	228688692	228688696	ESR1	TRANSFAC	yes		35916576
chr1	228688692	228688696	ESR1	TRANSFAC	yes		118474153
chr1	228688703	228688717	PAX6	JASPAR	yes		35916577
chr1	228688703	228688717	PAX6	JASPAR	yes		118474154
chr1	228688721	228688736	PRDM1	JASPAR	yes		35916578
chr1	228688721	228688736	PRDM1	JASPAR	yes		118474155
chr1	228688725	228688740	HNF1A	JASPAR	yes		35916579
chr1	228688725	228688740	HNF1A	JASPAR	yes		118474156
chr1	228688726	228688739	HNF1B	JASPAR	yes		35916580
chr1	228688726	228688739	HNF1B	JASPAR	yes		118474157
chr1	228688727	228688739	HNF1B	JASPAR	yes		35916581
chr1	228688727	228688739	HNF1B	JASPAR	yes		118474158
chr1	228688735	228688738	MYB	TRANSFAC	yes		35916582
chr1	228688735	228688738	MYB	TRANSFAC	yes		118474159
chr1	228688735	228688751	SOX4	JASPAR	yes		35916583
chr1	228688735	228688751	SOX4	JASPAR	yes		118474160
chr1	228688761	228688764	MYB	TRANSFAC	yes		35916584
chr1	228688761	228688764	MYB	TRANSFAC	yes		118474161
chr1	228688783	228688789	TCF4	TRANSFAC	yes		35916585
chr1	228688783	228688789	TCF4	TRANSFAC	yes		118474162
chr1	228688804	228688823	CTCF	JASPAR	yes		35916586
chr1	228688804	228688823	CTCF	JASPAR	yes		118474163
chr1	228688810	228688820	MZF1	JASPAR	yes		35916587
chr1	228688810	228688820	MZF1	JASPAR	yes		118474164
chr1	228688824	228688830	MZF1	JASPAR	yes		35916588
chr1	228688824	228688830	MZF1	JASPAR	yes		118474165
chr1	228688827	228688847	TP53	JASPAR	yes		35916589
chr1	228688827	228688847	TP53	JASPAR	yes		118474166
chr1	228688829	228688845	SOX4	JASPAR	yes		35916590
chr1	228688829	228688845	SOX4	JASPAR	yes		118474167
chr1	228688846	228688854	MGA	JASPAR	yes		35916591
chr1	228688846	228688854	MGA	JASPAR	yes		118474168
chr1	228688863	228688867	NFE	TRANSFAC	yes		35916592
chr1	228688863	228688867	NFE	TRANSFAC	yes		118474169
chr1	228688865	228688875	SREBF1	JASPAR	yes		35916593
chr1	228688865	228688875	SREBF1	JASPAR	yes		118474170
chr1	228688900	228688904	TEAD2	TRANSFAC	yes		35916594
chr1	228688900	228688904	TEAD2	TRANSFAC	yes		118474171
chr1	228688902	228688905	MYB	TRANSFAC	yes		35916595
chr1	228688902	228688905	MYB	TRANSFAC	yes		118474172

chrom	Position	dbSNP ID	Reference Allele	Alternative Allele	is SNP in TFBS	id
chr1	228688620	rs545953025	T	C	CTCF MAX MYC	1003085
chr1	228688670	rs77182122	C	T	BHLHE40 CTCF MAX MYC TP53 TP73	1003086
chr1	228688745	rs78186140	C	T	BHLHE40 CTCF MAX MYC RAD21 SOX4	1003087
chr1	228688763	rs550828506	A	G	BHLHE40 CTCF MAX MYB MYC RAD21 RUNX3	1003088
chr1	228688771	rs144603472	G	GTA	BHLHE40 CTCF MAX MYC RAD21 RUNX3	1003089
chr1	228688771	rs535228899	G	GTA	BHLHE40 CTCF MAX MYC RAD21 RUNX3	1003090
chr1	228688875	rs148189844	G	A	BHLHE40 CTCF MAX MYC RAD21 RUNX3 SREBF1	1003091
chr1	228688883	rs189287977	C	T	BHLHE40 CTCF MAX MYC RAD21 RUNX3	1003092
chr1	228688896	rs141377332	G	T	BHLHE40 CTCF MAX MYC RAD21 RUNX3	1003093

Blank TSI value indicates lack of sufficient expression for calculation
Chrom	Start	End	Strand	Gene Name	Ensembl ID	TSS	TSI of Normal tissues	TSI of Cancer tissues	Distance between enhancer and TSS	id
chr1	228581374	228594541	-	TRIM11	ENSG00000154370.9	228594541	0.68	1.0	1921	5933
chr1	228595641	228604562	-	TRIM17	ENSG00000162931.7	228604562	0.89	1.0	1922	15954
chr1	228612546	228613026	-	HIST3H3	ENSG00000168148.3	228613026	0.84	0.89	1923	24418
chr1	228645065	228645560	-	HIST3H2A	ENSG00000181218.4	228645560	0.89	0.99	1924	56952
chr1	228645808	228646259	+	HIST3H2BB	ENSG00000196890.3	228645808	0.92	0.96	1925	57200
chr1	228674762	228683467	+	RNF187	ENSG00000168159.9	228674762	0.68	1.0	1926	86154

Blank TSI value indicates lack of sufficient expression for calculation
Chrom	Start	End	Strand	miRNA Name	miRBase ID	TSS	Score	TSI of Normal tissues	TSI of Cancer tissues	id	More

No results

EnhancerDB

View enhancers around input chromosomal region

Chromosome characteristics of vista5419[chr1:228688608-228688902]

Tissue distribution of vista5419

Transcription factor that possibly regulate vista5419[chr1:228688608-228688902]

SNP sites on vista5419[chr1:228688608-228688902]

Genes possibly regulated by vista5419[chr1:228688608-228688902]

Details of Genes

Expression level of Genes

miRNAs possibly regulated by vista5419[chr1:228688608-228688902]

Details of miRNAs

Expression level of miRNAs