EnhancerDB

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chrom.	Start	End	TF Name	Source	Predicted site?	Tissue/Cell line	id
chr1	228782390	228784133	POLR2A	UCSC Txn Factor	no	Conserved	107877212
chr1	228782390	228784133	POLR2A	UCSC Txn Factor	no	Conserved	107877213
chr1	228782390	228784133	POLR2A	UCSC Txn Factor	no	Conserved	107877214
chr1	228782589	228782610	ZNF263	JASPAR	yes		35919133
chr1	228782589	228782610	ZNF263	JASPAR	yes		118474173
chr1	228782591	228782612	ZNF263	JASPAR	yes		35919134
chr1	228782591	228782612	ZNF263	JASPAR	yes		118474174
chr1	228782594	228782615	ZNF263	JASPAR	yes		35919135
chr1	228782594	228782615	ZNF263	JASPAR	yes		118474175
chr1	228782598	228782619	ZNF263	JASPAR	yes		35919136
chr1	228782598	228782619	ZNF263	JASPAR	yes		118474176
chr1	228782601	228782622	ZNF263	JASPAR	yes		35919137
chr1	228782601	228782622	ZNF263	JASPAR	yes		118474177
chr1	228782604	228782625	ZNF263	JASPAR	yes		35919138
chr1	228782604	228782625	ZNF263	JASPAR	yes		118474178
chr1	228782607	228782628	ZNF263	JASPAR	yes		35919139
chr1	228782607	228782628	ZNF263	JASPAR	yes		118474179
chr1	228782616	228782631	STAT2	JASPAR	yes		35919140
chr1	228782616	228782631	STAT2	JASPAR	yes		118474180
chr1	228782618	228782624	GATA3	JASPAR	yes		35919141
chr1	228782618	228782624	GATA3	JASPAR	yes		118474181
chr1	228782629	228782637	SP1	TRANSFAC	yes		35919142
chr1	228782629	228782637	SP1	TRANSFAC	yes		118474182
chr1	228782631	228782637	MAZ	TRANSFAC	yes		35919143
chr1	228782631	228782637	MAZ	TRANSFAC	yes		118474183
chr1	228782631	228782642	E2F6	JASPAR	yes		35919144
chr1	228782631	228782642	E2F6	JASPAR	yes		118474184
chr1	228782635	228782648	SMAD2	JASPAR	yes		35919145
chr1	228782635	228782648	SMAD2	JASPAR	yes		118474185
chr1	228782656	228782677	ZNF263	JASPAR	yes		35919146
chr1	228782656	228782677	ZNF263	JASPAR	yes		118474186
chr1	228782665	228782686	ZNF263	JASPAR	yes		35919147
chr1	228782665	228782686	ZNF263	JASPAR	yes		118474187
chr1	228782668	228782689	ZNF263	JASPAR	yes		35919148
chr1	228782668	228782689	ZNF263	JASPAR	yes		118474188
chr1	228782672	228782687	FOXP1	JASPAR	yes		35919149
chr1	228782672	228782687	FOXP1	JASPAR	yes		118474189
chr1	228782688	228782702	PLAG1	JASPAR	yes		35919150
chr1	228782688	228782702	PLAG1	JASPAR	yes		118474190
chr1	228782695	228782716	IRF1	JASPAR	yes		35919151
chr1	228782695	228782716	IRF1	JASPAR	yes		118474191
chr1	228782696	228782717	ZNF263	JASPAR	yes		35919152
chr1	228782696	228782717	ZNF263	JASPAR	yes		118474192
chr1	228782699	228782714	PRDM1	JASPAR	yes		35919153
chr1	228782699	228782714	PRDM1	JASPAR	yes		118474193
chr1	228782706	228782720	SPI1	JASPAR	yes		35919154
chr1	228782706	228782720	SPI1	JASPAR	yes		118474194
chr1	228782732	228782737	ETS2	TRANSFAC	yes		35919155
chr1	228782732	228782737	ETS2	TRANSFAC	yes		118474195
chr1	228782744	228782759	ZBTB33	JASPAR	yes		35919156
chr1	228782744	228782759	ZBTB33	JASPAR	yes		118474196
chr1	228782748	228782751	MYB	TRANSFAC	yes		35919157
chr1	228782748	228782751	MYB	TRANSFAC	yes		118474197
chr1	228782754	228782768	PLAG1	JASPAR	yes		35919158
chr1	228782754	228782768	PLAG1	JASPAR	yes		118474198
chr1	228782756	228782760	H4TF2	TRANSFAC	yes		35919159
chr1	228782756	228782760	H4TF2	TRANSFAC	yes		118474199
chr1	228782757	228782769	INSM1	JASPAR	yes		35919160
chr1	228782757	228782769	INSM1	JASPAR	yes		118474200
chr1	228782761	228782774	NFKB2	JASPAR	yes		35919161
chr1	228782761	228782774	NFKB2	JASPAR	yes		118474201
chr1	228782763	228782774	NFKB1	JASPAR	yes		35919162
chr1	228782763	228782774	NFKB1	JASPAR	yes		118474202
chr1	228782765	228782775	RELA	JASPAR	yes		35919163
chr1	228782765	228782775	RELA	JASPAR	yes		118474203
chr1	228782773	228782794	ZNF263	JASPAR	yes		35919164
chr1	228782773	228782794	ZNF263	JASPAR	yes		118474204
chr1	228782780	228782801	ZNF263	JASPAR	yes		35919165
chr1	228782780	228782801	ZNF263	JASPAR	yes		118474205
chr1	228782783	228782804	ZNF263	JASPAR	yes		35919166
chr1	228782783	228782804	ZNF263	JASPAR	yes		118474206
chr1	228782784	228782791	CEBPA	TRANSFAC	yes		35919167
chr1	228782784	228782791	CEBPA	TRANSFAC	yes		118474207
chr1	228782785	228782796	E2F6	JASPAR	yes		35919168
chr1	228782785	228782796	E2F6	JASPAR	yes		118474208
chr1	228782822	228782829	SPIB	JASPAR	yes		35919169
chr1	228782822	228782829	SPIB	JASPAR	yes		118474209

chrom	Position	dbSNP ID	Reference Allele	Alternative Allele	is SNP in TFBS	id
chr1	228782603	rs369701810	G	C	POLR2A ZNF263	1003334
chr1	228782605	rs187183938	G	C	POLR2A ZNF263	1003335
chr1	228782606	rs539905360	A	G	POLR2A ZNF263	1003336
chr1	228782630	rs55724370	G	C	POLR2A SP1 STAT2	1003337
chr1	228782636	rs531603221	G	A	E2F6 MAZ POLR2A SMAD2 SP1	1003338
chr1	228782637	rs527381543	GGAGA	G	E2F6 MAZ POLR2A SMAD2 SP1	1003339
chr1	228782655	rs534174311	A	G	POLR2A	1003340
chr1	228782668	rs567727382	A	G,T	POLR2A ZNF263	1003341
chr1	228782675	rs73103117	G	C	FOXP1 POLR2A ZNF263	1003342
chr1	228782678	rs551879929	GT	G	FOXP1 POLR2A ZNF263	1003343
chr1	228782705	rs114805658	G	A	IRF1 POLR2A PRDM1 ZNF263	1003344
chr1	228782717	rs372645655	A	C	POLR2A SPI1 ZNF263	1003345
chr1	228782730	rs577260500	A	T	POLR2A	1003346
chr1	228782758	rs180814346	G	T	H4TF2 INSM1 PLAG1 POLR2A ZBTB33	1003347
chr1	228782760	rs542472698	C	G	H4TF2 INSM1 PLAG1 POLR2A	1003348
chr1	228782770	rs113837933	AC	A	NFKB1 NFKB2 POLR2A RELA	1003349
chr1	228782772	rs567292978	C	G,T	NFKB1 NFKB2 POLR2A RELA	1003350
chr1	228782773	rs535830580	C	T	NFKB1 NFKB2 POLR2A RELA ZNF263	1003351
chr1	228782786	rs6426507	A	T	CEBPA E2F6 POLR2A ZNF263	1003352
chr1	228782792	rs572674423	G	C	E2F6 POLR2A ZNF263	1003353
chr1	228782862	rs189431170	G	A	POLR2A	1003354
chr1	228782863	rs142070187	C	T	POLR2A	1003355
chr1	228782866	rs6426508	T	A	POLR2A	1003356
chr1	228782867	rs550108225	C	G	POLR2A	1003357
chr1	228782881	rs116123342	A	T	POLR2A	1003358
chr1	228782885	rs60730279	G	A	POLR2A	1003359

Blank TSI value indicates lack of sufficient expression for calculation
Chrom	Start	End	Strand	Gene Name	Ensembl ID	TSS	TSI of Normal tissues	TSI of Cancer tissues	Distance between enhancer and TSS	id	More
chr1	228870824	228882416	+	RHOU	ENSG00000116574.4	228870824	0.7	0.97	1927	12062

Blank TSI value indicates lack of sufficient expression for calculation
Chrom	Start	End	Strand	miRNA Name	miRBase ID	TSS	Score	TSI of Normal tissues	TSI of Cancer tissues	id	More

No results

EnhancerDB

View enhancers around input chromosomal region

Chromosome characteristics of vista5420[chr1:228782602-228782886]

Tissue distribution of vista5420

Transcription factor that possibly regulate vista5420[chr1:228782602-228782886]

SNP sites on vista5420[chr1:228782602-228782886]

Genes possibly regulated by vista5420[chr1:228782602-228782886]

Details of Genes

Expression level of Genes

miRNAs possibly regulated by vista5420[chr1:228782602-228782886]

Details of miRNAs

Expression level of miRNAs