EnhancerDB
  1. Home
  2. Enhancers
  3. vista5422[chr1:228783962-228784250]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5422[chr1:228783962-228784250]
Back to top
Tissue distribution of vista5422
Back to top
Transcription factor that possibly regulate vista5422[chr1:228783962-228784250]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 228782390 228784133 POLR2A UCSC Txn Factor no Conserved 107877212
chr1 228782390 228784133 POLR2A UCSC Txn Factor no Conserved 107877213
chr1 228782390 228784133 POLR2A UCSC Txn Factor no Conserved 107877214
chr1 228783952 228783971 CTCF JASPAR yes 35919245
chr1 228783952 228783971 CTCF JASPAR yes 118474261
chr1 228783979 228783985 ETS1 JASPAR yes 35919246
chr1 228783979 228783985 SPI1 JASPAR yes 35919247
chr1 228783979 228783985 ETS1 JASPAR yes 118474262
chr1 228783979 228783985 SPI1 JASPAR yes 118474263
chr1 228784036 228784051 ZBTB33 JASPAR yes 35919248
chr1 228784036 228784051 ZBTB33 JASPAR yes 118474264
chr1 228784085 228784094 THAP1 JASPAR yes 35919249
chr1 228784085 228784094 THAP1 JASPAR yes 118474265
chr1 228784088 228784092 LFA1 TRANSFAC yes 35919250
chr1 228784088 228784092 LFA1 TRANSFAC yes 118474266
chr1 228784167 228784182 AR JASPAR yes 35919251
chr1 228784167 228784182 AR JASPAR yes 118474267
chr1 228784182 228784200 ESR1 JASPAR yes 35919252
chr1 228784182 228784200 ESR1 JASPAR yes 118474268
chr1 228784183 228784193 TBX21 JASPAR yes 35919253
chr1 228784183 228784193 TBX21 JASPAR yes 118474269
chr1 228784183 228784194 TBX2 JASPAR yes 35919254
chr1 228784183 228784194 TBX2 JASPAR yes 118474270
chr1 228784183 228784196 EOMES JASPAR yes 35919255
chr1 228784183 228784196 EOMES JASPAR yes 118474271
chr1 228784184 228784192 TBX15 JASPAR yes 35919256
chr1 228784184 228784192 TBX1 JASPAR yes 35919257
chr1 228784184 228784192 TBX4 JASPAR yes 35919258
chr1 228784184 228784192 TBX5 JASPAR yes 35919259
chr1 228784184 228784192 TBX15 JASPAR yes 118474272
chr1 228784184 228784192 TBX1 JASPAR yes 118474273
chr1 228784184 228784192 TBX4 JASPAR yes 118474274
chr1 228784184 228784192 TBX5 JASPAR yes 118474275
chr1 228784184 228784194 TBR1 JASPAR yes 35919260
chr1 228784184 228784194 TBR1 JASPAR yes 118474276
chr1 228784192 228784197 SP1 TRANSFAC yes 35919261
chr1 228784192 228784197 SP1 TRANSFAC yes 118474277
chr1 228784193 228784213 ESR1 JASPAR yes 35919262
chr1 228784193 228784213 ESR1 JASPAR yes 118474278
chr1 228784194 228784203 TFAP2A JASPAR yes 35919263
chr1 228784194 228784203 TFAP2A JASPAR yes 118474279
chr1 228784204 228784216 TEAD1 JASPAR yes 35919264
chr1 228784204 228784216 TEAD1 JASPAR yes 118474280
chr1 228784232 228784244 TFAP2A JASPAR yes 35919265
chr1 228784232 228784244 TFAP2B JASPAR yes 35919266
chr1 228784232 228784244 TFAP2C JASPAR yes 35919267
chr1 228784232 228784244 TFAP2A JASPAR yes 118474281
chr1 228784232 228784244 TFAP2B JASPAR yes 118474282
chr1 228784232 228784244 TFAP2C JASPAR yes 118474283
chr1 228784240 228784245 SP1 TRANSFAC yes 35919268
chr1 228784240 228784245 SP1 TRANSFAC yes 118474284
chr1 228784240 228784246 SP1 TRANSFAC yes 35919269
chr1 228784240 228784246 SP1 TRANSFAC yes 118474285
chr1 228784241 228784261 RREB1 JASPAR yes 35919270
chr1 228784241 228784261 RREB1 JASPAR yes 118474286
chr1 228784249 228784258 SRY JASPAR yes 35919271
chr1 228784249 228784258 SRY JASPAR yes 118474287
SNP sites on vista5422[chr1:228783962-228784250]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 228784067 rs372404165 C T
POLR2A
1003387
Genes possibly regulated by vista5422[chr1:228783962-228784250]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 228870824 228882416 + RHOU ENSG00000116574.4 228870824 0.7 0.97 1927 13426
Expression level of Genes
Back to top
miRNAs possibly regulated by vista5422[chr1:228783962-228784250]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results