EnhancerDB
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  3. vista5423[chr1:228848738-228848880]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5423[chr1:228848738-228848880]
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Tissue distribution of vista5423
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Transcription factor that possibly regulate vista5423[chr1:228848738-228848880]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 228848739 228848760 IRF1 JASPAR yes 118474288
chr1 228848742 228848755 ELF1 JASPAR yes 118474289
chr1 228848742 228848756 SPI1 JASPAR yes 118474290
chr1 228848742 228848756 SPIC JASPAR yes 118474291
chr1 228848745 228848750 ETS2 TRANSFAC yes 118474292
chr1 228848756 228848766 HMBOX1 JASPAR yes 118474293
chr1 228848758 228848761 MYB TRANSFAC yes 118474294
chr1 228848783 228848798 MEF2A JASPAR yes 118474295
chr1 228848787 228848791 YY1 TRANSFAC yes 118474296
chr1 228848801 228848805 YY1 TRANSFAC yes 118474297
chr1 228848811 228848825 RORA JASPAR yes 118474298
chr1 228848812 228848822 RORA JASPAR yes 118474299
chr1 228848816 228848827 ELK4 JASPAR yes 118474300
chr1 228848816 228848827 FLI1 JASPAR yes 118474301
chr1 228848817 228848821 YY1 TRANSFAC yes 118474302
chr1 228848817 228848830 ELF1 JASPAR yes 118474303
chr1 228848817 228848832 STAT1 JASPAR yes 118474304
chr1 228848818 228848826 FEV JASPAR yes 118474305
chr1 228848819 228848830 STAT1 JASPAR yes 118474306
chr1 228848819 228848830 STAT3 JASPAR yes 118474307
chr1 228848840 228848855 STAT1 JASPAR yes 118474308
chr1 228848842 228848853 STAT1 JASPAR yes 118474309
chr1 228848842 228848853 STAT3 JASPAR yes 118474310
chr1 228848847 228848857 RELA JASPAR yes 118474311
chr1 228848847 228848857 REL JASPAR yes 118474312
chr1 228848847 228848858 NFKB1 JASPAR yes 118474313
chr1 228848848 228848858 RELA JASPAR yes 118474314
chr1 228848848 228848858 REL JASPAR yes 118474315
SNP sites on vista5423[chr1:228848738-228848880]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 228848806 rs117778274 T C no 1003834
Genes possibly regulated by vista5423[chr1:228848738-228848880]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 228870824 228882416 + RHOU ENSG00000116574.4 228870824 0.7 0.97 1927 78056
Expression level of Genes
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miRNAs possibly regulated by vista5423[chr1:228848738-228848880]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results