EnhancerDB
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  3. vista5424[chr1:228878269-228878481]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5424[chr1:228878269-228878481]
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Tissue distribution of vista5424
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Transcription factor that possibly regulate vista5424[chr1:228878269-228878481]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 228878276 228878281 GATA2 JASPAR yes 35925232
chr1 228878276 228878281 GATA2 JASPAR yes 118474316
chr1 228878276 228878290 SPI1 JASPAR yes 35925233
chr1 228878276 228878290 SPIC JASPAR yes 35925234
chr1 228878276 228878290 SPI1 JASPAR yes 118474317
chr1 228878276 228878290 SPIC JASPAR yes 118474318
chr1 228878277 228878290 ELF1 JASPAR yes 35925235
chr1 228878277 228878290 ELF1 JASPAR yes 118474319
chr1 228878279 228878290 ELF5 JASPAR yes 35925236
chr1 228878279 228878290 ELF5 JASPAR yes 118474320
chr1 228878280 228878291 FLI1 JASPAR yes 35925237
chr1 228878280 228878291 FLI1 JASPAR yes 118474321
chr1 228878280 228878301 ZNF263 JASPAR yes 35925238
chr1 228878280 228878301 ZNF263 JASPAR yes 118474322
chr1 228878281 228878286 ETS2 TRANSFAC yes 35925239
chr1 228878281 228878286 ETS2 TRANSFAC yes 118474323
chr1 228878281 228878289 FEV JASPAR yes 35925240
chr1 228878281 228878289 FEV JASPAR yes 118474324
chr1 228878282 228878289 SPI1 JASPAR yes 35925241
chr1 228878282 228878289 SPI1 JASPAR yes 118474325
chr1 228878283 228878304 ZNF263 JASPAR yes 35925242
chr1 228878283 228878304 ZNF263 JASPAR yes 118474326
chr1 228878284 228878305 ZNF263 JASPAR yes 35925243
chr1 228878284 228878305 ZNF263 JASPAR yes 118474327
chr1 228878286 228878301 PRDM1 JASPAR yes 35925244
chr1 228878286 228878301 PRDM1 JASPAR yes 118474328
chr1 228878290 228878311 ZNF263 JASPAR yes 35925245
chr1 228878290 228878311 ZNF263 JASPAR yes 118474329
chr1 228878295 228878316 ZNF263 JASPAR yes 35925246
chr1 228878295 228878316 ZNF263 JASPAR yes 118474330
chr1 228878296 228878317 ZNF263 JASPAR yes 35925247
chr1 228878296 228878317 ZNF263 JASPAR yes 118474331
chr1 228878299 228878320 ZNF263 JASPAR yes 35925248
chr1 228878299 228878320 ZNF263 JASPAR yes 118474332
chr1 228878300 228878305 ETS2 TRANSFAC yes 35925249
chr1 228878300 228878305 ETS2 TRANSFAC yes 118474333
chr1 228878300 228878308 EHF JASPAR yes 35925250
chr1 228878300 228878308 EHF JASPAR yes 118474334
chr1 228878300 228878321 ZNF263 JASPAR yes 35925251
chr1 228878300 228878321 ZNF263 JASPAR yes 118474335
chr1 228878303 228878324 ZNF263 JASPAR yes 35925252
chr1 228878303 228878324 ZNF263 JASPAR yes 118474336
chr1 228878305 228878316 E2F6 JASPAR yes 35925253
chr1 228878305 228878316 E2F6 JASPAR yes 118474337
chr1 228878307 228878320 ELF1 JASPAR yes 35925254
chr1 228878307 228878320 ELF1 JASPAR yes 118474338
chr1 228878307 228878328 ZNF263 JASPAR yes 35925255
chr1 228878307 228878328 ZNF263 JASPAR yes 118474339
chr1 228878310 228878316 PEA3 TRANSFAC yes 35925256
chr1 228878310 228878316 PEA3 TRANSFAC yes 118474340
chr1 228878331 228878345 SPI1 JASPAR yes 35925257
chr1 228878331 228878345 SPIC JASPAR yes 35925258
chr1 228878331 228878345 SPI1 JASPAR yes 118474341
chr1 228878331 228878345 SPIC JASPAR yes 118474342
chr1 228878336 228878343 PEA3 TRANSFAC yes 35925259
chr1 228878336 228878343 PEA3 TRANSFAC yes 118474343
chr1 228878344 228878354 HMBOX1 JASPAR yes 35925260
chr1 228878344 228878354 HMBOX1 JASPAR yes 118474344
chr1 228878345 228878353 LBX1 JASPAR yes 35925261
chr1 228878345 228878353 LBX1 JASPAR yes 118474345
chr1 228878346 228878349 MYB TRANSFAC yes 35925262
chr1 228878346 228878349 MYB TRANSFAC yes 118474346
chr1 228878358 228878367 NKX3-2 JASPAR yes 35925263
chr1 228878358 228878367 NKX3-2 JASPAR yes 118474347
chr1 228878361 228878381 TBX19 JASPAR yes 35925264
chr1 228878361 228878381 TBX19 JASPAR yes 118474348
chr1 228878383 228878394 BATF JASPAR yes 35925265
chr1 228878383 228878394 BATF JASPAR yes 118474349
chr1 228878385 228878396 FOS JASPAR yes 35925266
chr1 228878385 228878396 FOSL1 JASPAR yes 35925267
chr1 228878385 228878396 JUND JASPAR yes 35925268
chr1 228878385 228878396 FOS JASPAR yes 118474350
chr1 228878385 228878396 FOSL1 JASPAR yes 118474351
chr1 228878385 228878396 JUND JASPAR yes 118474352
chr1 228878386 228878397 FOSL2 JASPAR yes 35925269
chr1 228878386 228878397 JUNB JASPAR yes 35925270
chr1 228878386 228878397 FOSL2 JASPAR yes 118474353
chr1 228878386 228878397 JUNB JASPAR yes 118474354
chr1 228878386 228878404 ESR2 JASPAR yes 35925271
chr1 228878386 228878404 ESR2 JASPAR yes 118474355
chr1 228878388 228878408 ESR1 JASPAR yes 35925272
chr1 228878388 228878408 ESR1 JASPAR yes 118474356
chr1 228878410 228878416 SOX10 JASPAR yes 35925273
chr1 228878410 228878416 SOX10 JASPAR yes 118474357
chr1 228878415 228878419 H4TF2 TRANSFAC yes 35925274
chr1 228878415 228878419 H4TF2 TRANSFAC yes 118474358
chr1 228878423 228878441 SRF JASPAR yes 35925275
chr1 228878423 228878441 SRF JASPAR yes 118474359
chr1 228878427 228878431 YY1 TRANSFAC yes 35925276
chr1 228878427 228878431 YY1 TRANSFAC yes 118474360
chr1 228878449 228878463 POU1F1 JASPAR yes 35925277
chr1 228878449 228878463 POU1F1 JASPAR yes 118474361
chr1 228878450 228878462 POU3F1 JASPAR yes 35925278
chr1 228878450 228878462 POU3F2 JASPAR yes 35925279
chr1 228878450 228878462 POU3F1 JASPAR yes 118474362
chr1 228878450 228878462 POU3F2 JASPAR yes 118474363
chr1 228878450 228878463 POU3F3 JASPAR yes 35925280
chr1 228878450 228878463 POU3F3 JASPAR yes 118474364
chr1 228878452 228878461 POU3F4 JASPAR yes 35925281
chr1 228878452 228878461 POU5F1B JASPAR yes 35925282
chr1 228878452 228878461 POU3F4 JASPAR yes 118474365
chr1 228878452 228878461 POU5F1B JASPAR yes 118474366
chr1 228878457 228878461 YY1 TRANSFAC yes 35925283
chr1 228878457 228878461 YY1 TRANSFAC yes 118474367
chr1 228878469 228878488 REST JASPAR yes 35925284
chr1 228878469 228878488 REST JASPAR yes 118474368
SNP sites on vista5424[chr1:228878269-228878481]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 228878275 rs6681268 A C no 1004041
chr1 228878288 rs7545235 G A
ELF1 ELF5 FEV FLI1 PRDM1 SPI1 SPIC ZNF263
1004042
chr1 228878340 rs148752853 G A
PEA3 SPI1 SPIC
1004043
chr1 228878345 rs12060173 A G
HMBOX1 LBX1 SPI1 SPIC
1004044
chr1 228878375 rs4500282 T A
TBX19
1004045
chr1 228878379 rs4391637 A C
TBX19
1004046
chr1 228878481 rs4391638 A C
REST
1004047
Genes possibly regulated by vista5424[chr1:228878269-228878481]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 228870824 228882416 + RHOU ENSG00000116574.4 228870824 0.7 0.97 1927 92555
Expression level of Genes
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miRNAs possibly regulated by vista5424[chr1:228878269-228878481]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results