EnhancerDB
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  3. vista5425[chr1:228913817-228914177]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5425[chr1:228913817-228914177]
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Tissue distribution of vista5425
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Transcription factor that possibly regulate vista5425[chr1:228913817-228914177]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 228913807 228913817 NFATC3 JASPAR yes 35927070
chr1 228913807 228913817 NFATC3 JASPAR yes 118474369
chr1 228913812 228913821 SRY JASPAR yes 35927072
chr1 228913812 228913821 SRY JASPAR yes 118474370
chr1 228913831 228913834 MYB TRANSFAC yes 35927073
chr1 228913831 228913834 MYB TRANSFAC yes 118474371
chr1 228913837 228913852 MEF2A JASPAR yes 35927074
chr1 228913837 228913852 MEF2A JASPAR yes 118474372
chr1 228913838 228913853 MEF2C JASPAR yes 35927075
chr1 228913838 228913853 MEF2C JASPAR yes 118474373
chr1 228913839 228913851 MEF2A JASPAR yes 35927076
chr1 228913839 228913851 MEF2B JASPAR yes 35927077
chr1 228913839 228913851 MEF2D JASPAR yes 35927078
chr1 228913839 228913851 MEF2A JASPAR yes 118474374
chr1 228913839 228913851 MEF2B JASPAR yes 118474375
chr1 228913839 228913851 MEF2D JASPAR yes 118474376
chr1 228913841 228913845 YY1 TRANSFAC yes 35927079
chr1 228913841 228913845 YY1 TRANSFAC yes 118474377
chr1 228913878 228913888 MAX JASPAR yes 35927080
chr1 228913878 228913888 MAX JASPAR yes 118474378
chr1 228913886 228913897 HOXC12 JASPAR yes 35927081
chr1 228913886 228913897 HOXC12 JASPAR yes 118474379
chr1 228913887 228913897 HOXD11 JASPAR yes 35927082
chr1 228913887 228913897 HOXD11 JASPAR yes 118474380
chr1 228913894 228913908 FOXF2 JASPAR yes 35927083
chr1 228913894 228913908 FOXF2 JASPAR yes 118474381
chr1 228913895 228913906 FOXA1 JASPAR yes 35927084
chr1 228913895 228913906 FOXA1 JASPAR yes 118474382
chr1 228913895 228913910 FOXA1 JASPAR yes 35927085
chr1 228913895 228913910 FOXA1 JASPAR yes 118474383
chr1 228913896 228913907 FOXB1 JASPAR yes 35927086
chr1 228913896 228913907 FOXC1 JASPAR yes 35927087
chr1 228913896 228913907 FOXB1 JASPAR yes 118474384
chr1 228913896 228913907 FOXC1 JASPAR yes 118474385
chr1 228913896 228913908 FOXC2 JASPAR yes 35927088
chr1 228913896 228913908 FOXC2 JASPAR yes 118474386
chr1 228913897 228913908 FOXP2 JASPAR yes 35927089
chr1 228913897 228913908 FOXP2 JASPAR yes 118474387
chr1 228913899 228913906 FOXD2 JASPAR yes 35927090
chr1 228913899 228913906 FOXI1 JASPAR yes 35927091
chr1 228913899 228913906 FOXL1 JASPAR yes 35927092
chr1 228913899 228913906 FOXO4 JASPAR yes 35927093
chr1 228913899 228913906 FOXO6 JASPAR yes 35927094
chr1 228913899 228913906 FOXP3 JASPAR yes 35927095
chr1 228913899 228913906 FOXD2 JASPAR yes 118474388
chr1 228913899 228913906 FOXI1 JASPAR yes 118474389
chr1 228913899 228913906 FOXL1 JASPAR yes 118474390
chr1 228913899 228913906 FOXO4 JASPAR yes 118474391
chr1 228913899 228913906 FOXO6 JASPAR yes 118474392
chr1 228913899 228913906 FOXP3 JASPAR yes 118474393
chr1 228913899 228913907 FOXD1 JASPAR yes 35927096
chr1 228913899 228913907 FOXG1 JASPAR yes 35927097
chr1 228913899 228913907 FOXO3 JASPAR yes 35927098
chr1 228913899 228913907 FOXD1 JASPAR yes 118474394
chr1 228913899 228913907 FOXG1 JASPAR yes 118474395
chr1 228913899 228913907 FOXO3 JASPAR yes 118474396
chr1 228913902 228913918 SOX8 JASPAR yes 35927099
chr1 228913902 228913918 SOX8 JASPAR yes 118474397
chr1 228913903 228913914 NFIL3 JASPAR yes 35927100
chr1 228913903 228913914 NFIL3 JASPAR yes 118474398
chr1 228913904 228913908 YY1 TRANSFAC yes 35927101
chr1 228913904 228913908 YY1 TRANSFAC yes 118474399
chr1 228913904 228913918 POU4F1 JASPAR yes 35927102
chr1 228913904 228913918 POU4F1 JASPAR yes 118474400
chr1 228913905 228913917 HNF1B JASPAR yes 35927103
chr1 228913905 228913917 HNF1B JASPAR yes 118474401
chr1 228913909 228913923 ONECUT1 JASPAR yes 35927104
chr1 228913909 228913923 ONECUT1 JASPAR yes 118474402
chr1 228913910 228913920 CUX1 JASPAR yes 35927105
chr1 228913910 228913920 CUX1 JASPAR yes 118474403
chr1 228913912 228913924 PBX1 JASPAR yes 35927106
chr1 228913912 228913924 PBX1 JASPAR yes 118474404
chr1 228913930 228913942 DBP JASPAR yes 35927107
chr1 228913930 228913942 HLF JASPAR yes 35927108
chr1 228913930 228913942 DBP JASPAR yes 118474405
chr1 228913930 228913942 HLF JASPAR yes 118474406
chr1 228913937 228913940 MYB TRANSFAC yes 35927109
chr1 228913937 228913940 MYB TRANSFAC yes 118474407
chr1 228913948 228913969 ZNF263 JASPAR yes 35927110
chr1 228913948 228913969 ZNF263 JASPAR yes 118474408
chr1 228913957 228913970 ELF1 JASPAR yes 35927111
chr1 228913957 228913970 ELF1 JASPAR yes 118474409
chr1 228913960 228913970 ETV6 JASPAR yes 35927112
chr1 228913960 228913970 ETV6 JASPAR yes 118474410
chr1 228913961 228913969 EHF JASPAR yes 35927113
chr1 228913961 228913969 EHF JASPAR yes 118474411
chr1 228913962 228913969 SPI1 JASPAR yes 35927114
chr1 228913962 228913969 SPI1 JASPAR yes 118474412
chr1 228913971 228913991 RREB1 JASPAR yes 35927115
chr1 228913971 228913991 RREB1 JASPAR yes 118474413
chr1 228913978 228913989 E2F6 JASPAR yes 35927116
chr1 228913978 228913989 E2F6 JASPAR yes 118474414
chr1 228913978 228913992 PLAG1 JASPAR yes 35927117
chr1 228913978 228913992 PLAG1 JASPAR yes 118474415
chr1 228913979 228913984 SP1 TRANSFAC yes 35927118
chr1 228913979 228913984 SP1 TRANSFAC yes 118474416
chr1 228913980 228913990 SP1 JASPAR yes 35927119
chr1 228913980 228913990 SP1 JASPAR yes 118474417
chr1 228913982 228913987 ETS2 TRANSFAC yes 35927120
chr1 228913982 228913987 ETS2 TRANSFAC yes 118474418
chr1 228913990 228913995 GATA2 JASPAR yes 35927121
chr1 228913990 228913995 GATA2 JASPAR yes 118474419
chr1 228913993 228914005 FOXC2 JASPAR yes 35927122
chr1 228913993 228914005 FOXC2 JASPAR yes 118474420
chr1 228913994 228914005 FOXC1 JASPAR yes 35927123
chr1 228913994 228914005 FOXC1 JASPAR yes 118474421
chr1 228913998 228914009 NFIL3 JASPAR yes 35927124
chr1 228913998 228914009 NFIL3 JASPAR yes 118474422
chr1 228914016 228914020 H1TF2 TRANSFAC yes 35927125
chr1 228914016 228914020 NFE TRANSFAC yes 35927126
chr1 228914016 228914020 SRF TRANSFAC yes 35927127
chr1 228914016 228914020 H1TF2 TRANSFAC yes 118474423
chr1 228914016 228914020 NFE TRANSFAC yes 118474424
chr1 228914016 228914020 SRF TRANSFAC yes 118474425
chr1 228914019 228914030 NFIL3 JASPAR yes 35927128
chr1 228914019 228914030 NFIL3 JASPAR yes 118474426
chr1 228914020 228914032 DBP JASPAR yes 35927129
chr1 228914020 228914032 HLF JASPAR yes 35927130
chr1 228914020 228914032 TEF JASPAR yes 35927131
chr1 228914020 228914032 DBP JASPAR yes 118474427
chr1 228914020 228914032 HLF JASPAR yes 118474428
chr1 228914020 228914032 TEF JASPAR yes 118474429
chr1 228914022 228914033 NFIL3 JASPAR yes 35927132
chr1 228914022 228914033 NFIL3 JASPAR yes 118474430
chr1 228914031 228914038 SPI1 JASPAR yes 35927133
chr1 228914031 228914038 SPI1 JASPAR yes 118474431
chr1 228914042 228914056 PAX6 JASPAR yes 35927134
chr1 228914042 228914056 PAX6 JASPAR yes 118474432
chr1 228914058 228914062 TEAD2 TRANSFAC yes 35927135
chr1 228914058 228914062 TEAD2 TRANSFAC yes 118474433
chr1 228914058 228914063 TBP TRANSFAC yes 35927136
chr1 228914058 228914063 TBP TRANSFAC yes 118474434
chr1 228914058 228914064 TFIID TRANSFAC yes 35927137
chr1 228914058 228914064 TFIID TRANSFAC yes 118474435
chr1 228914073 228914088 RUNX2 JASPAR yes 35927138
chr1 228914073 228914088 RUNX2 JASPAR yes 118474436
chr1 228914080 228914096 SRF JASPAR yes 35927139
chr1 228914080 228914096 SRF JASPAR yes 118474437
chr1 228914086 228914090 TEAD2 TRANSFAC yes 35927140
chr1 228914086 228914090 TEAD2 TRANSFAC yes 118474438
chr1 228914090 228914101 DMRT3 JASPAR yes 35927141
chr1 228914090 228914101 DMRT3 JASPAR yes 118474439
chr1 228914097 228914101 YY1 TRANSFAC yes 35927142
chr1 228914097 228914101 YY1 TRANSFAC yes 118474440
chr1 228914097 228914112 MEF2C JASPAR yes 35927143
chr1 228914097 228914112 MEF2C JASPAR yes 118474441
chr1 228914098 228914113 MEF2A JASPAR yes 35927144
chr1 228914098 228914113 MEF2A JASPAR yes 118474442
chr1 228914099 228914111 MEF2A JASPAR yes 35927145
chr1 228914099 228914111 MEF2D JASPAR yes 35927146
chr1 228914099 228914111 MEF2A JASPAR yes 118474443
chr1 228914099 228914111 MEF2D JASPAR yes 118474444
chr1 228914108 228914114 SOX10 JASPAR yes 35927147
chr1 228914108 228914114 SOX10 JASPAR yes 118474445
chr1 228914111 228914116 ETS2 TRANSFAC yes 35927148
chr1 228914111 228914116 ETS2 TRANSFAC yes 118474446
chr1 228914113 228914124 NFKB1 JASPAR yes 35927149
chr1 228914113 228914124 NFKB1 JASPAR yes 118474447
chr1 228914161 228914174 ZBTB18 JASPAR yes 35927150
chr1 228914161 228914174 ZBTB18 JASPAR yes 118474448
chr1 228914171 228914182 FOSL2 JASPAR yes 35927151
chr1 228914171 228914182 FOSL2 JASPAR yes 118474449
SNP sites on vista5425[chr1:228913817-228914177]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 228913819 rs115264994 A G
SRY
1004244
chr1 228913952 rs57956262 G A
ZNF263
1004245
chr1 228914105 rs151050192 A G
MEF2A MEF2C MEF2D
1004246
chr1 228914125 rs116540143 A G no 1004247
Genes possibly regulated by vista5425[chr1:228913817-228914177]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 228870824 228882416 + RHOU ENSG00000116574.4 228870824 0.7 0.97 1927 57007
Expression level of Genes
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miRNAs possibly regulated by vista5425[chr1:228913817-228914177]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results