EnhancerDB
  1. Home
  2. Enhancers
  3. vista5427[chr1:228917012-228917506]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5427[chr1:228917012-228917506]
Back to top
Tissue distribution of vista5427
Back to top
Transcription factor that possibly regulate vista5427[chr1:228917012-228917506]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 228916861 228917189 TCF7L2 UCSC Txn Factor no Conserved 107877410
chr1 228916869 228917825 KAP1 UCSC Txn Factor no Conserved 107877411
chr1 228916993 228917014 IRF1 JASPAR yes 35927543
chr1 228916993 228917014 IRF1 JASPAR yes 118474467
chr1 228917011 228917024 DUXA JASPAR yes 35927545
chr1 228917011 228917024 DUXA JASPAR yes 118474468
chr1 228917012 228917023 DUX4 JASPAR yes 35927546
chr1 228917012 228917023 DUX4 JASPAR yes 118474469
chr1 228917019 228917032 ATF4 JASPAR yes 35927547
chr1 228917019 228917032 ATF4 JASPAR yes 118474470
chr1 228917041 228917052 HOXC11 JASPAR yes 35927548
chr1 228917041 228917052 HOXC12 JASPAR yes 35927549
chr1 228917041 228917052 HOXC13 JASPAR yes 35927550
chr1 228917041 228917052 HOXD12 JASPAR yes 35927551
chr1 228917041 228917052 HOXC11 JASPAR yes 118474471
chr1 228917041 228917052 HOXC12 JASPAR yes 118474472
chr1 228917041 228917052 HOXC13 JASPAR yes 118474473
chr1 228917041 228917052 HOXD12 JASPAR yes 118474474
chr1 228917042 228917052 HOXC10 JASPAR yes 35927552
chr1 228917042 228917052 HOXD11 JASPAR yes 35927553
chr1 228917042 228917052 HOXC10 JASPAR yes 118474475
chr1 228917042 228917052 HOXD11 JASPAR yes 118474476
chr1 228917042 228917058 POU4F2 JASPAR yes 35927554
chr1 228917042 228917058 POU4F3 JASPAR yes 35927555
chr1 228917042 228917058 POU4F2 JASPAR yes 118474477
chr1 228917042 228917058 POU4F3 JASPAR yes 118474478
chr1 228917045 228917059 RORA JASPAR yes 35927556
chr1 228917045 228917059 RORA JASPAR yes 118474479
chr1 228917058 228917072 EBF1 JASPAR yes 35927557
chr1 228917058 228917072 EBF1 JASPAR yes 118474480
chr1 228917059 228917074 TFAP2C JASPAR yes 35927558
chr1 228917059 228917074 TFAP2C JASPAR yes 118474481
chr1 228917060 228917071 EBF1 JASPAR yes 35927559
chr1 228917060 228917071 EBF1 JASPAR yes 118474482
chr1 228917064 228917069 TFAP2A TRANSFAC yes 35927560
chr1 228917064 228917069 TFAP2A TRANSFAC yes 118474483
chr1 228917064 228917070 MZF1 JASPAR yes 35927561
chr1 228917064 228917070 MZF1 JASPAR yes 118474484
chr1 228917072 228917077 GATA2 JASPAR yes 35927562
chr1 228917072 228917077 GATA2 JASPAR yes 118474485
chr1 228917083 228917087 LFA1 TRANSFAC yes 35927563
chr1 228917083 228917087 LFA1 TRANSFAC yes 118474486
chr1 228917117 228917127 NKX2-3 JASPAR yes 35927564
chr1 228917117 228917127 NKX2-3 JASPAR yes 118474487
chr1 228917118 228917127 NKX2-8 JASPAR yes 35927565
chr1 228917118 228917127 NKX2-8 JASPAR yes 118474488
chr1 228917122 228917132 NHLH1 JASPAR yes 35927566
chr1 228917122 228917132 NHLH1 JASPAR yes 118474489
chr1 228917145 228917148 MYB TRANSFAC yes 35927567
chr1 228917145 228917148 MYB TRANSFAC yes 118474490
chr1 228917171 228917187 SOX8 JASPAR yes 35927568
chr1 228917171 228917187 SOX8 JASPAR yes 118474491
chr1 228917195 228917210 AR JASPAR yes 35927569
chr1 228917195 228917210 AR JASPAR yes 118474492
chr1 228917223 228917244 ZNF263 JASPAR yes 35927570
chr1 228917223 228917244 ZNF263 JASPAR yes 118474493
chr1 228917236 228917246 MZF1 JASPAR yes 35927571
chr1 228917236 228917246 MZF1 JASPAR yes 118474494
chr1 228917239 228917249 SP1 JASPAR yes 35927572
chr1 228917239 228917249 SP1 JASPAR yes 118474495
chr1 228917241 228917246 ETS2 TRANSFAC yes 35927573
chr1 228917241 228917246 ETS2 TRANSFAC yes 118474496
chr1 228917253 228917264 DMRT3 JASPAR yes 35927574
chr1 228917253 228917264 DMRT3 JASPAR yes 118474497
chr1 228917258 228917272 GATA2 JASPAR yes 35927575
chr1 228917258 228917272 GATA2 JASPAR yes 118474498
chr1 228917260 228917264 YY1 TRANSFAC yes 35927576
chr1 228917260 228917264 YY1 TRANSFAC yes 118474499
chr1 228917262 228917270 GATA3 JASPAR yes 35927577
chr1 228917262 228917270 GATA3 JASPAR yes 118474500
chr1 228917264 228917278 GATA2 JASPAR yes 35927578
chr1 228917264 228917278 GATA2 JASPAR yes 118474501
chr1 228917268 228917276 GATA3 JASPAR yes 35927579
chr1 228917268 228917276 GATA3 JASPAR yes 118474502
chr1 228917269 228917281 MEF2D JASPAR yes 35927580
chr1 228917269 228917281 MEF2D JASPAR yes 118474503
chr1 228917288 228917293 GATA2 JASPAR yes 35927581
chr1 228917288 228917293 GATA2 JASPAR yes 118474504
chr1 228917292 228917305 SMAD2 JASPAR yes 35927582
chr1 228917292 228917305 SMAD2 JASPAR yes 118474505
chr1 228917299 228917319 RREB1 JASPAR yes 35927583
chr1 228917299 228917319 RREB1 JASPAR yes 118474506
chr1 228917314 228917317 MYB TRANSFAC yes 35927584
chr1 228917314 228917317 MYB TRANSFAC yes 118474507
chr1 228917333 228917350 BCL6B JASPAR yes 35927585
chr1 228917333 228917350 BCL6B JASPAR yes 118474508
chr1 228917339 228917344 TFAP2A TRANSFAC yes 35927586
chr1 228917339 228917344 TFAP2A TRANSFAC yes 118474509
chr1 228917339 228917345 MZF1 JASPAR yes 35927587
chr1 228917339 228917345 MZF1 JASPAR yes 118474510
chr1 228917359 228917371 FOXI1 JASPAR yes 35927588
chr1 228917359 228917371 FOXI1 JASPAR yes 118474511
chr1 228917360 228917374 FOXF2 JASPAR yes 35927589
chr1 228917360 228917374 FOXF2 JASPAR yes 118474512
chr1 228917361 228917369 FOXG1 JASPAR yes 35927590
chr1 228917361 228917369 FOXG1 JASPAR yes 118474513
chr1 228917388 228917400 TAL1 JASPAR yes 35927591
chr1 228917388 228917400 TAL1 JASPAR yes 118474514
chr1 228917390 228917400 MYF6 JASPAR yes 35927592
chr1 228917390 228917400 NEUROG2 JASPAR yes 35927593
chr1 228917390 228917400 MYF6 JASPAR yes 118474515
chr1 228917390 228917400 NEUROG2 JASPAR yes 118474516
chr1 228917430 228917444 JUN JASPAR yes 35927594
chr1 228917430 228917444 JUN JASPAR yes 118474517
chr1 228917431 228917441 HOXB3 JASPAR yes 35927595
chr1 228917431 228917441 HOXB3 JASPAR yes 118474518
chr1 228917432 228917443 BATF JASPAR yes 35927596
chr1 228917432 228917443 BATF JASPAR yes 118474519
chr1 228917433 228917444 FOSL2 JASPAR yes 35927597
chr1 228917433 228917444 JUNB JASPAR yes 35927598
chr1 228917433 228917444 FOSL2 JASPAR yes 118474520
chr1 228917433 228917444 JUNB JASPAR yes 118474521
chr1 228917434 228917445 FOS JASPAR yes 35927599
chr1 228917434 228917445 FOSL1 JASPAR yes 35927600
chr1 228917434 228917445 JUND JASPAR yes 35927601
chr1 228917434 228917445 NFE2 JASPAR yes 35927602
chr1 228917434 228917445 FOS JASPAR yes 118474522
chr1 228917434 228917445 FOSL1 JASPAR yes 118474523
chr1 228917434 228917445 JUND JASPAR yes 118474524
chr1 228917434 228917445 NFE2 JASPAR yes 118474525
chr1 228917435 228917444 JDP2 JASPAR yes 35927603
chr1 228917435 228917444 JDP2 JASPAR yes 118474526
chr1 228917435 228917446 JUNB JASPAR yes 35927604
chr1 228917435 228917446 JUNB JASPAR yes 118474527
chr1 228917435 228917449 JUN JASPAR yes 35927605
chr1 228917435 228917449 JUN JASPAR yes 118474528
chr1 228917436 228917447 BATF JASPAR yes 35927606
chr1 228917436 228917447 BATF JASPAR yes 118474529
chr1 228917455 228917462 SPIB JASPAR yes 35927607
chr1 228917455 228917462 SPIB JASPAR yes 118474530
chr1 228917458 228917466 FOXO3 JASPAR yes 35927608
chr1 228917458 228917466 FOXO3 JASPAR yes 118474531
chr1 228917470 228917480 ALX3 JASPAR yes 35927609
chr1 228917470 228917480 EMX2 JASPAR yes 35927610
chr1 228917470 228917480 GSX1 JASPAR yes 35927611
chr1 228917470 228917480 GSX2 JASPAR yes 35927612
chr1 228917470 228917480 HOXB2 JASPAR yes 35927613
chr1 228917470 228917480 HOXB3 JASPAR yes 35927614
chr1 228917470 228917480 LBX2 JASPAR yes 35927615
chr1 228917470 228917480 LHX2 JASPAR yes 35927616
chr1 228917470 228917480 MIXL1 JASPAR yes 35927617
chr1 228917470 228917480 MNX1 JASPAR yes 35927618
chr1 228917470 228917480 NOTO JASPAR yes 35927619
chr1 228917470 228917480 ALX3 JASPAR yes 118474532
chr1 228917470 228917480 EMX2 JASPAR yes 118474533
chr1 228917470 228917480 GSX1 JASPAR yes 118474534
chr1 228917470 228917480 GSX2 JASPAR yes 118474535
chr1 228917470 228917480 HOXB2 JASPAR yes 118474536
chr1 228917470 228917480 HOXB3 JASPAR yes 118474537
chr1 228917470 228917480 LBX2 JASPAR yes 118474538
chr1 228917470 228917480 LHX2 JASPAR yes 118474539
chr1 228917470 228917480 MIXL1 JASPAR yes 118474540
chr1 228917470 228917480 MNX1 JASPAR yes 118474541
chr1 228917470 228917480 NOTO JASPAR yes 118474542
chr1 228917471 228917479 EN1 JASPAR yes 35927620
chr1 228917471 228917479 ISX JASPAR yes 35927621
chr1 228917471 228917479 LBX1 JASPAR yes 35927622
chr1 228917471 228917479 LHX9 JASPAR yes 35927623
chr1 228917471 228917479 PAX4 JASPAR yes 35927624
chr1 228917471 228917479 PDX1 JASPAR yes 35927625
chr1 228917471 228917479 PRRX1 JASPAR yes 35927626
chr1 228917471 228917479 RAX2 JASPAR yes 35927627
chr1 228917471 228917479 SHOX JASPAR yes 35927628
chr1 228917471 228917479 UNCX JASPAR yes 35927629
chr1 228917471 228917479 VAX1 JASPAR yes 35927630
chr1 228917471 228917479 VAX2 JASPAR yes 35927631
chr1 228917471 228917479 VSX1 JASPAR yes 35927632
chr1 228917471 228917479 VSX2 JASPAR yes 35927633
chr1 228917471 228917479 EN1 JASPAR yes 118474543
chr1 228917471 228917479 ISX JASPAR yes 118474544
chr1 228917471 228917479 LBX1 JASPAR yes 118474545
chr1 228917471 228917479 LHX9 JASPAR yes 118474546
chr1 228917471 228917479 PAX4 JASPAR yes 118474547
chr1 228917471 228917479 PDX1 JASPAR yes 118474548
chr1 228917471 228917479 PRRX1 JASPAR yes 118474549
chr1 228917471 228917479 RAX2 JASPAR yes 118474550
chr1 228917471 228917479 SHOX JASPAR yes 118474551
chr1 228917471 228917479 UNCX JASPAR yes 118474552
chr1 228917471 228917479 VAX1 JASPAR yes 118474553
chr1 228917471 228917479 VAX2 JASPAR yes 118474554
chr1 228917471 228917479 VSX1 JASPAR yes 118474555
chr1 228917471 228917479 VSX2 JASPAR yes 118474556
chr1 228917505 228917511 GATA3 JASPAR yes 35927634
chr1 228917505 228917511 GATA3 JASPAR yes 118474557
SNP sites on vista5427[chr1:228917012-228917506]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 228917051 rs241323 A C,G
HOXC10 HOXC11 HOXC12 HOXC13 HOXD11 HOXD12 KAP1 POU4F2 POU4F3 RORA TCF7L2
1004282
chr1 228917346 rs241322 A G
BCL6B KAP1
1004283
chr1 228917406 rs241321 G A
KAP1
1004284
Genes possibly regulated by vista5427[chr1:228917012-228917506]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 228870824 228882416 + RHOU ENSG00000116574.4 228870824 0.7 0.97 1927 53812
Expression level of Genes
Back to top
miRNAs possibly regulated by vista5427[chr1:228917012-228917506]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results