EnhancerDB
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  3. vista5428[chr1:228921739-228922035]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5428[chr1:228921739-228922035]
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Tissue distribution of vista5428
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Transcription factor that possibly regulate vista5428[chr1:228921739-228922035]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 228921730 228921745 MEF2A JASPAR yes 35928225
chr1 228921730 228921745 MEF2A JASPAR yes 118474558
chr1 228921731 228921743 MEF2A JASPAR yes 35928227
chr1 228921731 228921743 MEF2B JASPAR yes 35928228
chr1 228921731 228921743 MEF2D JASPAR yes 35928229
chr1 228921731 228921743 MEF2A JASPAR yes 118474559
chr1 228921731 228921743 MEF2B JASPAR yes 118474560
chr1 228921731 228921743 MEF2D JASPAR yes 118474561
chr1 228921739 228921742 MYB TRANSFAC yes 35928230
chr1 228921739 228921742 MYB TRANSFAC yes 118474562
chr1 228921755 228921758 MYB TRANSFAC yes 35928231
chr1 228921755 228921758 MYB TRANSFAC yes 118474563
chr1 228921765 228921768 MYB TRANSFAC yes 35928232
chr1 228921765 228921768 MYB TRANSFAC yes 118474564
chr1 228921793 228921797 LFA1 TRANSFAC yes 35928233
chr1 228921793 228921797 LFA1 TRANSFAC yes 118474565
chr1 228921793 228921805 NHLH1 JASPAR yes 35928234
chr1 228921793 228921805 NHLH1 JASPAR yes 118474566
chr1 228921794 228921804 NHLH1 JASPAR yes 35928235
chr1 228921794 228921804 NHLH1 JASPAR yes 118474567
chr1 228921812 228921832 PPARG JASPAR yes 35928236
chr1 228921812 228921832 PPARG JASPAR yes 118474568
chr1 228921814 228921832 ESR2 JASPAR yes 35928237
chr1 228921814 228921832 ESR2 JASPAR yes 118474569
chr1 228921841 228921855 TCF7L2 JASPAR yes 35928238
chr1 228921841 228921855 TCF7L2 JASPAR yes 118474570
chr1 228921841 228921856 LEF1 JASPAR yes 35928239
chr1 228921841 228921856 LEF1 JASPAR yes 118474571
chr1 228921862 228921883 IRF1 JASPAR yes 35928240
chr1 228921862 228921883 IRF1 JASPAR yes 118474572
chr1 228921866 228921880 STAT1 JASPAR yes 35928241
chr1 228921866 228921880 STAT1 JASPAR yes 118474573
chr1 228921866 228921881 STAT2 JASPAR yes 35928242
chr1 228921866 228921881 STAT2 JASPAR yes 118474574
chr1 228921869 228921879 NFATC3 JASPAR yes 35928243
chr1 228921869 228921879 NFATC3 JASPAR yes 118474575
chr1 228921871 228921877 ETS1 JASPAR yes 35928244
chr1 228921871 228921877 ETS1 JASPAR yes 118474576
chr1 228921882 228921897 FOXP1 JASPAR yes 35928245
chr1 228921882 228921897 FOXP1 JASPAR yes 118474577
chr1 228921882 228921903 IRF1 JASPAR yes 35928246
chr1 228921882 228921903 IRF1 JASPAR yes 118474578
chr1 228921885 228921896 FOXP2 JASPAR yes 35928247
chr1 228921885 228921896 FOXP2 JASPAR yes 118474579
chr1 228921886 228921900 SPI1 JASPAR yes 35928248
chr1 228921886 228921900 SPI1 JASPAR yes 118474580
chr1 228921886 228921901 STAT2 JASPAR yes 35928249
chr1 228921886 228921901 STAT2 JASPAR yes 118474581
chr1 228921917 228921922 NFY TRANSFAC yes 35928250
chr1 228921917 228921922 NFY TRANSFAC yes 118474582
chr1 228921937 228921955 SRF JASPAR yes 35928251
chr1 228921937 228921955 SRF JASPAR yes 118474583
chr1 228921943 228921947 YY1 TRANSFAC yes 35928252
chr1 228921943 228921947 YY1 TRANSFAC yes 118474584
chr1 228921960 228921970 MYF6 JASPAR yes 35928253
chr1 228921960 228921970 MYF6 JASPAR yes 118474585
chr1 228921962 228921967 MYC TRANSFAC yes 35928254
chr1 228921962 228921967 MYC TRANSFAC yes 118474586
chr1 228921972 228921979 TCF4 TRANSFAC yes 35928255
chr1 228921972 228921979 TCF4 TRANSFAC yes 118474587
chr1 228921972 228921980 TCF4 TRANSFAC yes 35928256
chr1 228921972 228921980 TCF4 TRANSFAC yes 118474588
chr1 228921973 228921979 LEF1 TRANSFAC yes 35928257
chr1 228921973 228921979 TCF4 TRANSFAC yes 35928258
chr1 228921973 228921979 LEF1 TRANSFAC yes 118474589
chr1 228921973 228921979 TCF4 TRANSFAC yes 118474590
chr1 228921974 228921986 PBX1 JASPAR yes 35928259
chr1 228921974 228921986 PBX1 JASPAR yes 118474591
chr1 228921995 228922000 NFY TRANSFAC yes 35928260
chr1 228921995 228922000 NFY TRANSFAC yes 118474592
chr1 228921997 228922003 NFIC JASPAR yes 35928261
chr1 228921997 228922003 NFIC JASPAR yes 118474593
chr1 228922019 228922032 POU2F2 JASPAR yes 35928262
chr1 228922019 228922032 POU2F2 JASPAR yes 118474594
chr1 228922019 228922033 POU1F1 JASPAR yes 35928263
chr1 228922019 228922033 POU1F1 JASPAR yes 118474595
chr1 228922020 228922031 FOXB1 JASPAR yes 35928264
chr1 228922020 228922031 FOXB1 JASPAR yes 118474596
chr1 228922020 228922032 POU3F1 JASPAR yes 35928265
chr1 228922020 228922032 POU3F2 JASPAR yes 35928266
chr1 228922020 228922032 POU3F1 JASPAR yes 118474597
chr1 228922020 228922032 POU3F2 JASPAR yes 118474598
chr1 228922020 228922033 POU3F3 JASPAR yes 35928267
chr1 228922020 228922033 POU3F3 JASPAR yes 118474599
chr1 228922021 228922025 YY1 TRANSFAC yes 35928268
chr1 228922021 228922025 YY1 TRANSFAC yes 118474600
chr1 228922021 228922033 POU2F1 JASPAR yes 35928269
chr1 228922021 228922033 POU2F1 JASPAR yes 118474601
chr1 228922022 228922031 POU3F4 JASPAR yes 35928270
chr1 228922022 228922031 POU5F1B JASPAR yes 35928271
chr1 228922022 228922031 POU3F4 JASPAR yes 118474602
chr1 228922022 228922031 POU5F1B JASPAR yes 118474603
chr1 228922023 228922031 FOXL1 JASPAR yes 35928272
chr1 228922023 228922031 FOXL1 JASPAR yes 118474604
chr1 228922029 228922034 GATA2 JASPAR yes 35928273
chr1 228922029 228922034 GATA2 JASPAR yes 118474605
chr1 228922029 228922039 TFCP2 JASPAR yes 35928274
chr1 228922029 228922039 TFCP2 JASPAR yes 118474606
SNP sites on vista5428[chr1:228921739-228922035]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 228921781 rs73099572 C T no 1004348
chr1 228921833 rs140890525 G A no 1004349
chr1 228921863 rs149438461 G GACAGAAAACGGAAAGTGATGT
IRF1
1004350
Genes possibly regulated by vista5428[chr1:228921739-228922035]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 228870824 228882416 + RHOU ENSG00000116574.4 228870824 0.7 0.97 1927 49085
Expression level of Genes
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miRNAs possibly regulated by vista5428[chr1:228921739-228922035]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results