EnhancerDB
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  3. vista5429[chr1:228945464-228945740]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5429[chr1:228945464-228945740]
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Tissue distribution of vista5429
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Transcription factor that possibly regulate vista5429[chr1:228945464-228945740]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 228945473 228945477 NFE TRANSFAC yes 35931037
chr1 228945473 228945477 NFE TRANSFAC yes 118474607
chr1 228945473 228945478 GATA1 TRANSFAC yes 35931038
chr1 228945473 228945478 GATA1 TRANSFAC yes 118474608
chr1 228945473 228945479 GATA3 JASPAR yes 35931039
chr1 228945473 228945479 GATA3 JASPAR yes 118474609
chr1 228945488 228945498 SREBF1 JASPAR yes 35931040
chr1 228945488 228945498 SREBF2 JASPAR yes 35931041
chr1 228945488 228945498 SREBF1 JASPAR yes 118474610
chr1 228945488 228945498 SREBF2 JASPAR yes 118474611
chr1 228945495 228945516 REST JASPAR yes 35931042
chr1 228945495 228945516 REST JASPAR yes 118474612
chr1 228945496 228945515 REST JASPAR yes 35931043
chr1 228945496 228945515 REST JASPAR yes 118474613
chr1 228945504 228945517 NFKB1 JASPAR yes 35931044
chr1 228945504 228945517 NFKB2 JASPAR yes 35931045
chr1 228945504 228945517 NFKB1 JASPAR yes 118474614
chr1 228945504 228945517 NFKB2 JASPAR yes 118474615
chr1 228945505 228945516 NFKB1 JASPAR yes 35931046
chr1 228945505 228945516 NFKB1 JASPAR yes 118474616
chr1 228945506 228945516 NFKB1 JASPAR yes 35931047
chr1 228945506 228945516 NFKB1 JASPAR yes 118474617
chr1 228945526 228945542 SOX4 JASPAR yes 35931048
chr1 228945526 228945542 SOX4 JASPAR yes 118474618
chr1 228945535 228945548 POU3F3 JASPAR yes 35931049
chr1 228945535 228945548 POU3F3 JASPAR yes 118474619
chr1 228945535 228945549 POU1F1 JASPAR yes 35931050
chr1 228945535 228945549 POU1F1 JASPAR yes 118474620
chr1 228945549 228945553 H1TF2 TRANSFAC yes 35931051
chr1 228945549 228945553 NFE TRANSFAC yes 35931052
chr1 228945549 228945553 SRF TRANSFAC yes 35931053
chr1 228945549 228945553 H1TF2 TRANSFAC yes 118474621
chr1 228945549 228945553 NFE TRANSFAC yes 118474622
chr1 228945549 228945553 SRF TRANSFAC yes 118474623
chr1 228945561 228945581 TP63 JASPAR yes 35931054
chr1 228945561 228945581 TP63 JASPAR yes 118474624
chr1 228945566 228945586 TP63 JASPAR yes 35931055
chr1 228945566 228945586 TP63 JASPAR yes 118474625
chr1 228945566 228945587 ZNF263 JASPAR yes 35931056
chr1 228945566 228945587 ZNF263 JASPAR yes 118474626
chr1 228945577 228945586 SP1 TRANSFAC yes 35931057
chr1 228945577 228945586 SP1 TRANSFAC yes 118474627
chr1 228945580 228945586 NFE2 TRANSFAC yes 35931058
chr1 228945580 228945586 NFE2 TRANSFAC yes 118474628
chr1 228945581 228945602 ZNF263 JASPAR yes 35931059
chr1 228945581 228945602 ZNF263 JASPAR yes 118474629
chr1 228945592 228945597 ETS2 TRANSFAC yes 35931060
chr1 228945592 228945597 ETS2 TRANSFAC yes 118474630
chr1 228945613 228945616 MYB TRANSFAC yes 35931061
chr1 228945613 228945616 MYB TRANSFAC yes 118474631
chr1 228945616 228945635 RFX2 JASPAR yes 35931062
chr1 228945616 228945635 RFX2 JASPAR yes 118474632
chr1 228945620 228945635 STAT1 JASPAR yes 35931063
chr1 228945620 228945635 STAT1 JASPAR yes 118474633
chr1 228945622 228945633 STAT1 JASPAR yes 35931064
chr1 228945622 228945633 STAT3 JASPAR yes 35931065
chr1 228945622 228945633 STAT1 JASPAR yes 118474634
chr1 228945622 228945633 STAT3 JASPAR yes 118474635
chr1 228945665 228945669 YY1 TRANSFAC yes 35931066
chr1 228945665 228945669 YY1 TRANSFAC yes 118474636
chr1 228945678 228945691 SMAD2 JASPAR yes 35931067
chr1 228945678 228945691 SMAD2 JASPAR yes 118474637
chr1 228945703 228945709 SOX10 JASPAR yes 35931068
chr1 228945703 228945709 SOX10 JASPAR yes 118474638
chr1 228945726 228945734 HOXA5 JASPAR yes 35931069
chr1 228945726 228945734 HOXA5 JASPAR yes 118474639
chr1 228945727 228945737 POU6F1 JASPAR yes 35931070
chr1 228945727 228945737 POU6F1 JASPAR yes 118474640
chr1 228945729 228945739 PAX7 JASPAR yes 35931071
chr1 228945729 228945739 PAX7 JASPAR yes 118474641
SNP sites on vista5429[chr1:228945464-228945740]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 228945561 rs73101367 C A
TP63
1004593
chr1 228945692 rs12749124 T C no 1004594
Genes possibly regulated by vista5429[chr1:228945464-228945740]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 228870824 228882416 + RHOU ENSG00000116574.4 228870824 0.7 0.97 1927 25360
Expression level of Genes
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miRNAs possibly regulated by vista5429[chr1:228945464-228945740]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results