EnhancerDB
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  3. vista5430[chr1:228959063-228959190]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5430[chr1:228959063-228959190]
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Tissue distribution of vista5430
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Transcription factor that possibly regulate vista5430[chr1:228959063-228959190]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 228959064 228959075 GCM1 JASPAR yes 118474642
chr1 228959072 228959083 FOXH1 JASPAR yes 118474643
chr1 228959073 228959079 ZNF354C JASPAR yes 118474644
chr1 228959073 228959083 GSC2 JASPAR yes 118474645
chr1 228959073 228959083 GSC JASPAR yes 118474646
chr1 228959084 228959095 FOXP2 JASPAR yes 118474647
chr1 228959084 228959098 FOXF2 JASPAR yes 118474648
chr1 228959085 228959093 FOXG1 JASPAR yes 118474649
chr1 228959090 228959095 GATA2 JASPAR yes 118474650
chr1 228959091 228959097 ZNF354C JASPAR yes 118474651
chr1 228959105 228959115 RELA JASPAR yes 118474652
chr1 228959105 228959115 REL JASPAR yes 118474653
chr1 228959105 228959116 NFKB1 JASPAR yes 118474654
chr1 228959111 228959118 SPIB JASPAR yes 118474655
chr1 228959126 228959137 FOS JASPAR yes 118474656
chr1 228959126 228959137 FOSL1 JASPAR yes 118474657
chr1 228959126 228959137 JUND JASPAR yes 118474658
chr1 228959127 228959138 FOSL2 JASPAR yes 118474659
chr1 228959127 228959138 JUNB JASPAR yes 118474660
chr1 228959127 228959141 JUN JASPAR yes 118474661
chr1 228959130 228959141 USF2 JASPAR yes 118474662
chr1 228959150 228959158 FOXO3 JASPAR yes 118474663
chr1 228959150 228959161 NFKB1 JASPAR yes 118474664
chr1 228959151 228959161 REL JASPAR yes 118474665
SNP sites on vista5430[chr1:228959063-228959190]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 228959106 rs6687209 C T
NFKB1 REL RELA
1004691
Genes possibly regulated by vista5430[chr1:228959063-228959190]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 228870824 228882416 + RHOU ENSG00000116574.4 228870824 0.7 0.97 1927 11761
Expression level of Genes
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miRNAs possibly regulated by vista5430[chr1:228959063-228959190]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results