EnhancerDB
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  3. vista5433[chr1:228963953-228964182]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5433[chr1:228963953-228964182]
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Tissue distribution of vista5433
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Transcription factor that possibly regulate vista5433[chr1:228963953-228964182]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 228963968 228963972 YY1 TRANSFAC yes 35932719
chr1 228963968 228963972 YY1 TRANSFAC yes 118474764
chr1 228963974 228963989 MEF2A JASPAR yes 35932720
chr1 228963974 228963989 MEF2A JASPAR yes 118474765
chr1 228963987 228964004 BCL6B JASPAR yes 35932721
chr1 228963987 228964004 BCL6B JASPAR yes 118474766
chr1 228963992 228964007 FOXP1 JASPAR yes 35932722
chr1 228963992 228964007 FOXP1 JASPAR yes 118474767
chr1 228964003 228964018 LEF1 JASPAR yes 35932723
chr1 228964003 228964018 LEF1 JASPAR yes 118474768
chr1 228964004 228964025 IRF1 JASPAR yes 35932724
chr1 228964004 228964025 IRF1 JASPAR yes 118474769
chr1 228964006 228964027 ZNF263 JASPAR yes 35932725
chr1 228964006 228964027 ZNF263 JASPAR yes 118474770
chr1 228964032 228964037 NFY TRANSFAC yes 35932726
chr1 228964032 228964037 NFY TRANSFAC yes 118474771
chr1 228964039 228964055 SOX8 JASPAR yes 35932727
chr1 228964039 228964055 SOX8 JASPAR yes 118474772
chr1 228964041 228964047 HiNF-A TRANSFAC yes 35932728
chr1 228964041 228964047 HiNF-A TRANSFAC yes 118474773
chr1 228964054 228964057 MYB TRANSFAC yes 35932729
chr1 228964054 228964057 MYB TRANSFAC yes 118474774
chr1 228964054 228964065 RUNX1 JASPAR yes 35932730
chr1 228964054 228964065 RUNX1 JASPAR yes 118474775
chr1 228964054 228964069 MEF2C JASPAR yes 35932731
chr1 228964054 228964069 MEF2C JASPAR yes 118474776
chr1 228964055 228964075 RREB1 JASPAR yes 35932732
chr1 228964055 228964075 RREB1 JASPAR yes 118474777
chr1 228964055 228964076 IRF1 JASPAR yes 35932733
chr1 228964055 228964076 IRF1 JASPAR yes 118474778
chr1 228964059 228964074 STAT2 JASPAR yes 35932734
chr1 228964059 228964074 STAT2 JASPAR yes 118474779
chr1 228964072 228964093 IRF1 JASPAR yes 35932735
chr1 228964072 228964093 IRF1 JASPAR yes 118474780
chr1 228964073 228964086 SMAD2 JASPAR yes 35932736
chr1 228964073 228964086 SMAD2 JASPAR yes 118474781
chr1 228964076 228964090 IRF8 JASPAR yes 35932737
chr1 228964076 228964090 IRF8 JASPAR yes 118474782
chr1 228964078 228964099 IRF1 JASPAR yes 35932738
chr1 228964078 228964099 IRF1 JASPAR yes 118474783
chr1 228964080 228964095 STAT2 JASPAR yes 35932739
chr1 228964080 228964095 STAT2 JASPAR yes 118474784
chr1 228964081 228964095 STAT1 JASPAR yes 35932740
chr1 228964081 228964095 STAT1 JASPAR yes 118474785
chr1 228964082 228964096 IRF8 JASPAR yes 35932741
chr1 228964082 228964096 IRF8 JASPAR yes 118474786
chr1 228964082 228964097 IRF9 JASPAR yes 35932742
chr1 228964082 228964097 IRF9 JASPAR yes 118474787
chr1 228964084 228964105 IRF1 JASPAR yes 35932743
chr1 228964084 228964105 IRF1 JASPAR yes 118474788
chr1 228964085 228964100 FOXP1 JASPAR yes 35932744
chr1 228964085 228964100 FOXP1 JASPAR yes 118474789
chr1 228964086 228964101 STAT2 JASPAR yes 35932745
chr1 228964086 228964101 STAT2 JASPAR yes 118474790
chr1 228964099 228964111 E2F8 JASPAR yes 35932746
chr1 228964099 228964111 E2F8 JASPAR yes 118474791
chr1 228964107 228964111 NFE TRANSFAC yes 35932747
chr1 228964107 228964111 NFE TRANSFAC yes 118474792
chr1 228964128 228964142 SPI1 JASPAR yes 35932748
chr1 228964128 228964142 SPIC JASPAR yes 35932749
chr1 228964128 228964142 SPI1 JASPAR yes 118474793
chr1 228964128 228964142 SPIC JASPAR yes 118474794
chr1 228964132 228964137 TFAP2A TRANSFAC yes 35932750
chr1 228964132 228964137 TFAP2A TRANSFAC yes 118474795
chr1 228964132 228964138 MZF1 JASPAR yes 35932751
chr1 228964132 228964138 MZF1 JASPAR yes 118474796
chr1 228964132 228964153 ZNF263 JASPAR yes 35932752
chr1 228964132 228964153 ZNF263 JASPAR yes 118474797
chr1 228964134 228964139 ETS2 TRANSFAC yes 35932753
chr1 228964134 228964139 ETS2 TRANSFAC yes 118474798
chr1 228964141 228964153 PBX1 JASPAR yes 35932754
chr1 228964141 228964153 PBX1 JASPAR yes 118474799
chr1 228964141 228964159 MAFF JASPAR yes 35932755
chr1 228964141 228964159 MAFF JASPAR yes 118474800
chr1 228964143 228964158 MAFK JASPAR yes 35932756
chr1 228964143 228964158 MAFK JASPAR yes 118474801
chr1 228964166 228964184 SRF JASPAR yes 35932757
chr1 228964166 228964184 SRF JASPAR yes 118474802
SNP sites on vista5433[chr1:228963953-228964182]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 228963977 rs551193244 A C,G
MEF2A
1004742
chr1 228963986 rs60338528 G A
MEF2A
1004743
chr1 228964036 rs116819934 T A
NFY
1004744
chr1 228964135 rs241298 G C,T
ETS2 MZF1 SPI1 SPIC TFAP2A ZNF263
1004745
Genes possibly regulated by vista5433[chr1:228963953-228964182]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 228870824 228882416 + RHOU ENSG00000116574.4 228870824 0.7 0.97 1927 6871
Expression level of Genes
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miRNAs possibly regulated by vista5433[chr1:228963953-228964182]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results