EnhancerDB
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  3. vista5442[chr1:229163343-229163424]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5442[chr1:229163343-229163424]
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Tissue distribution of vista5442
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Transcription factor that possibly regulate vista5442[chr1:229163343-229163424]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 229163233 229163633 FOS UCSC Txn Factor no Conserved 107877639
chr1 229163327 229163712 STAT3 UCSC Txn Factor no Conserved 107877645
chr1 229163359 229163373 RORA JASPAR yes 35954158
chr1 229163359 229163373 RORA JASPAR yes 118475073
chr1 229163367 229163380 SCRT2 JASPAR yes 35954159
chr1 229163367 229163380 SCRT2 JASPAR yes 118475074
chr1 229163379 229163383 YY1 TRANSFAC yes 35954160
chr1 229163379 229163383 YY1 TRANSFAC yes 118475075
chr1 229163380 229163395 IRF9 JASPAR yes 35954161
chr1 229163380 229163395 IRF9 JASPAR yes 118475076
chr1 229163383 229163396 ATF4 JASPAR yes 35954162
chr1 229163383 229163396 ATF4 JASPAR yes 118475077
chr1 229163384 229163395 CEBPA JASPAR yes 35954163
chr1 229163384 229163395 CEBPA JASPAR yes 118475078
chr1 229163390 229163398 BARX1 JASPAR yes 35954164
chr1 229163390 229163398 BSX JASPAR yes 35954165
chr1 229163390 229163398 ISL2 JASPAR yes 35954166
chr1 229163390 229163398 LMX1B JASPAR yes 35954167
chr1 229163390 229163398 MSX1 JASPAR yes 35954168
chr1 229163390 229163398 MSX2 JASPAR yes 35954169
chr1 229163390 229163398 BARX1 JASPAR yes 118475079
chr1 229163390 229163398 BSX JASPAR yes 118475080
chr1 229163390 229163398 ISL2 JASPAR yes 118475081
chr1 229163390 229163398 LMX1B JASPAR yes 118475082
chr1 229163390 229163398 MSX1 JASPAR yes 118475083
chr1 229163390 229163398 MSX2 JASPAR yes 118475084
chr1 229163394 229163402 ISL2 JASPAR yes 35954170
chr1 229163394 229163402 ISL2 JASPAR yes 118475085
chr1 229163394 229163403 NKX3-2 JASPAR yes 35954171
chr1 229163394 229163403 NKX3-2 JASPAR yes 118475086
chr1 229163411 229163421 TFAP4 JASPAR yes 35954172
chr1 229163411 229163421 TFAP4 JASPAR yes 118475087
chr1 229163411 229163425 JUN JASPAR yes 35954173
chr1 229163411 229163425 JUN JASPAR yes 118475088
chr1 229163414 229163425 JUNB JASPAR yes 35954174
chr1 229163414 229163425 NFE2L2 JASPAR yes 35954175
chr1 229163414 229163425 JUNB JASPAR yes 118475089
chr1 229163414 229163425 NFE2L2 JASPAR yes 118475090
chr1 229163415 229163426 FOS JASPAR yes 35954176
chr1 229163415 229163426 FOSL1 JASPAR yes 35954177
chr1 229163415 229163426 JUND JASPAR yes 35954178
chr1 229163415 229163426 FOS JASPAR yes 118475091
chr1 229163415 229163426 FOSL1 JASPAR yes 118475092
chr1 229163415 229163426 JUND JASPAR yes 118475093
chr1 229163416 229163427 FOSL2 JASPAR yes 35954179
chr1 229163416 229163427 JUNB JASPAR yes 35954180
chr1 229163416 229163427 FOSL2 JASPAR yes 118475094
chr1 229163416 229163427 JUNB JASPAR yes 118475095
chr1 229163416 229163430 JUN JASPAR yes 35954181
chr1 229163416 229163430 JUN JASPAR yes 118475096
SNP sites on vista5442[chr1:229163343-229163424]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista5442[chr1:229163343-229163424]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista5442[chr1:229163343-229163424]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results