EnhancerDB
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  3. vista5459[chr1:229335784-229335916]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5459[chr1:229335784-229335916]
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Tissue distribution of vista5459
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Transcription factor that possibly regulate vista5459[chr1:229335784-229335916]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 229335769 229335787 IRF2 JASPAR yes 35973364
chr1 229335769 229335787 IRF2 JASPAR yes 118475813
chr1 229335780 229335794 FOXF2 JASPAR yes 35973365
chr1 229335780 229335794 FOXF2 JASPAR yes 118475814
chr1 229335781 229335802 IRF1 JASPAR yes 35973366
chr1 229335781 229335802 IRF1 JASPAR yes 118475815
chr1 229335783 229335795 FOXI1 JASPAR yes 35973367
chr1 229335783 229335795 FOXI1 JASPAR yes 118475816
chr1 229335785 229335799 SPI1 JASPAR yes 35973368
chr1 229335785 229335799 SPIC JASPAR yes 35973369
chr1 229335785 229335799 SPI1 JASPAR yes 118475817
chr1 229335785 229335799 SPIC JASPAR yes 118475818
chr1 229335786 229335799 ELF1 JASPAR yes 35973370
chr1 229335786 229335799 ELF1 JASPAR yes 118475819
chr1 229335787 229335799 EHF JASPAR yes 35973371
chr1 229335787 229335799 ELF1 JASPAR yes 35973372
chr1 229335787 229335799 ELF4 JASPAR yes 35973373
chr1 229335787 229335799 EHF JASPAR yes 118475820
chr1 229335787 229335799 ELF1 JASPAR yes 118475821
chr1 229335787 229335799 ELF4 JASPAR yes 118475822
chr1 229335787 229335800 ELF3 JASPAR yes 35973374
chr1 229335787 229335800 ELF3 JASPAR yes 118475823
chr1 229335788 229335799 ELF5 JASPAR yes 35973375
chr1 229335788 229335799 ETV2 JASPAR yes 35973376
chr1 229335788 229335799 SPDEF JASPAR yes 35973377
chr1 229335788 229335799 ELF5 JASPAR yes 118475824
chr1 229335788 229335799 ETV2 JASPAR yes 118475825
chr1 229335788 229335799 SPDEF JASPAR yes 118475826
chr1 229335789 229335799 ELK1 JASPAR yes 35973378
chr1 229335789 229335799 ELK3 JASPAR yes 35973379
chr1 229335789 229335799 ERF JASPAR yes 35973380
chr1 229335789 229335799 ERG JASPAR yes 35973381
chr1 229335789 229335799 ETS1 JASPAR yes 35973382
chr1 229335789 229335799 ETV1 JASPAR yes 35973383
chr1 229335789 229335799 ETV3 JASPAR yes 35973384
chr1 229335789 229335799 ETV4 JASPAR yes 35973385
chr1 229335789 229335799 ETV6 JASPAR yes 35973386
chr1 229335789 229335799 FEV JASPAR yes 35973387
chr1 229335789 229335799 FLI1 JASPAR yes 35973388
chr1 229335789 229335799 ELK1 JASPAR yes 118475827
chr1 229335789 229335799 ELK3 JASPAR yes 118475828
chr1 229335789 229335799 ERF JASPAR yes 118475829
chr1 229335789 229335799 ERG JASPAR yes 118475830
chr1 229335789 229335799 ETS1 JASPAR yes 118475831
chr1 229335789 229335799 ETV1 JASPAR yes 118475832
chr1 229335789 229335799 ETV3 JASPAR yes 118475833
chr1 229335789 229335799 ETV4 JASPAR yes 118475834
chr1 229335789 229335799 ETV6 JASPAR yes 118475835
chr1 229335789 229335799 FEV JASPAR yes 118475836
chr1 229335789 229335799 FLI1 JASPAR yes 118475837
chr1 229335789 229335800 ELK4 JASPAR yes 35973389
chr1 229335789 229335800 FLI1 JASPAR yes 35973390
chr1 229335789 229335800 ELK4 JASPAR yes 118475838
chr1 229335789 229335800 FLI1 JASPAR yes 118475839
chr1 229335790 229335798 EHF JASPAR yes 35973391
chr1 229335790 229335798 FEV JASPAR yes 35973392
chr1 229335790 229335798 EHF JASPAR yes 118475840
chr1 229335790 229335798 FEV JASPAR yes 118475841
chr1 229335791 229335798 SPI1 JASPAR yes 35973393
chr1 229335791 229335798 SPI1 JASPAR yes 118475842
chr1 229335825 229335834 RUNX2 JASPAR yes 35973394
chr1 229335825 229335834 RUNX2 JASPAR yes 118475843
chr1 229335825 229335835 RUNX3 JASPAR yes 35973395
chr1 229335825 229335835 RUNX3 JASPAR yes 118475844
chr1 229335830 229335845 RUNX2 JASPAR yes 35973396
chr1 229335830 229335845 RUNX2 JASPAR yes 118475845
chr1 229335832 229335847 RFX5 JASPAR yes 35973397
chr1 229335832 229335847 RFX5 JASPAR yes 118475846
chr1 229335838 229335849 TFAP2C JASPAR yes 35973398
chr1 229335838 229335849 TFAP2C JASPAR yes 118475847
chr1 229335844 229335858 TLX1 JASPAR yes 35973399
chr1 229335844 229335858 TLX1 JASPAR yes 118475848
chr1 229335849 229335863 PLAG1 JASPAR yes 35973400
chr1 229335849 229335863 PLAG1 JASPAR yes 118475849
chr1 229335850 229335864 RXRB JASPAR yes 35973401
chr1 229335850 229335864 RXRG JASPAR yes 35973402
chr1 229335850 229335864 RXRB JASPAR yes 118475850
chr1 229335850 229335864 RXRG JASPAR yes 118475851
chr1 229335864 229335879 RFX5 JASPAR yes 35973403
chr1 229335864 229335879 RFX5 JASPAR yes 118475852
chr1 229335871 229335890 PAX5 JASPAR yes 35973404
chr1 229335871 229335890 PAX5 JASPAR yes 118475853
chr1 229335893 229335911 NR3C1 JASPAR yes 35973405
chr1 229335893 229335911 NR3C1 JASPAR yes 118475854
chr1 229335905 229335920 MEF2A JASPAR yes 35973406
chr1 229335905 229335920 MEF2A JASPAR yes 118475855
chr1 229335906 229335921 MEF2C JASPAR yes 35973407
chr1 229335906 229335921 MEF2C JASPAR yes 118475856
chr1 229335907 229335919 MEF2B JASPAR yes 35973408
chr1 229335907 229335919 MEF2B JASPAR yes 118475857
chr1 229335909 229335919 HOXA13 JASPAR yes 35973409
chr1 229335909 229335919 HOXB13 JASPAR yes 35973410
chr1 229335909 229335919 HOXD13 JASPAR yes 35973411
chr1 229335909 229335919 HOXA13 JASPAR yes 118475858
chr1 229335909 229335919 HOXB13 JASPAR yes 118475859
chr1 229335909 229335919 HOXD13 JASPAR yes 118475860
chr1 229335909 229335920 HOXA10 JASPAR yes 35973412
chr1 229335909 229335920 HOXA10 JASPAR yes 118475861
chr1 229335910 229335919 CDX1 JASPAR yes 35973413
chr1 229335910 229335919 CDX1 JASPAR yes 118475862
chr1 229335910 229335921 CDX2 JASPAR yes 35973414
chr1 229335910 229335921 CDX2 JASPAR yes 118475863
SNP sites on vista5459[chr1:229335784-229335916]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 229335842 rs112326325 C A
RFX5 RUNX2 TFAP2C
1009139
Genes possibly regulated by vista5459[chr1:229335784-229335916]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 229385383 229387557 + TMEM78 ENSG00000177800.2 229385383 0.93 0.96 1928 50533
chr1 229406822 229441641 + RAB4A ENSG00000168118.7 229406822 0.61 1.0 1929 29094
Expression level of Genes
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miRNAs possibly regulated by vista5459[chr1:229335784-229335916]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results