EnhancerDB
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  3. vista5461[chr1:229341143-229341392]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5461[chr1:229341143-229341392]
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Tissue distribution of vista5461
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Transcription factor that possibly regulate vista5461[chr1:229341143-229341392]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 229341137 229341143 SOX10 JASPAR yes 35974081
chr1 229341137 229341143 SOX10 JASPAR yes 118475909
chr1 229341140 229341154 ATF7 JASPAR yes 35974082
chr1 229341140 229341154 ATF7 JASPAR yes 118475910
chr1 229341141 229341153 JDP2 JASPAR yes 35974083
chr1 229341141 229341153 JDP2 JASPAR yes 118475911
chr1 229341172 229341182 TFAP4 JASPAR yes 35974084
chr1 229341172 229341182 TFAP4 JASPAR yes 118475912
chr1 229341178 229341193 HSF1 JASPAR yes 35974085
chr1 229341178 229341193 HSF1 JASPAR yes 118475913
chr1 229341179 229341192 HSF1 JASPAR yes 35974086
chr1 229341179 229341192 HSF2 JASPAR yes 35974087
chr1 229341179 229341192 HSF4 JASPAR yes 35974088
chr1 229341179 229341192 HSF1 JASPAR yes 118475914
chr1 229341179 229341192 HSF2 JASPAR yes 118475915
chr1 229341179 229341192 HSF4 JASPAR yes 118475916
chr1 229341183 229341198 HSF1 JASPAR yes 35974089
chr1 229341183 229341198 HSF1 JASPAR yes 118475917
chr1 229341184 229341197 HSF1 JASPAR yes 35974090
chr1 229341184 229341197 HSF2 JASPAR yes 35974091
chr1 229341184 229341197 HSF4 JASPAR yes 35974092
chr1 229341184 229341197 HSF1 JASPAR yes 118475918
chr1 229341184 229341197 HSF2 JASPAR yes 118475919
chr1 229341184 229341197 HSF4 JASPAR yes 118475920
chr1 229341201 229341204 MYB TRANSFAC yes 35974093
chr1 229341201 229341204 MYB TRANSFAC yes 118475921
chr1 229341250 229341265 MEF2A JASPAR yes 35974094
chr1 229341250 229341265 MEF2A JASPAR yes 118475922
chr1 229341251 229341263 MEF2A JASPAR yes 35974095
chr1 229341251 229341263 MEF2B JASPAR yes 35974096
chr1 229341251 229341263 MEF2D JASPAR yes 35974097
chr1 229341251 229341263 MEF2A JASPAR yes 118475923
chr1 229341251 229341263 MEF2B JASPAR yes 118475924
chr1 229341251 229341263 MEF2D JASPAR yes 118475925
chr1 229341252 229341262 MEF2A JASPAR yes 35974098
chr1 229341252 229341262 MEF2A JASPAR yes 118475926
chr1 229341253 229341257 TEAD2 TRANSFAC yes 35974099
chr1 229341253 229341257 TEAD2 TRANSFAC yes 118475927
chr1 229341253 229341263 GSX1 JASPAR yes 35974100
chr1 229341253 229341263 GSX2 JASPAR yes 35974101
chr1 229341253 229341263 LHX2 JASPAR yes 35974102
chr1 229341253 229341263 MEOX1 JASPAR yes 35974103
chr1 229341253 229341263 MEOX2 JASPAR yes 35974104
chr1 229341253 229341263 MNX1 JASPAR yes 35974105
chr1 229341253 229341263 GSX1 JASPAR yes 118475928
chr1 229341253 229341263 GSX2 JASPAR yes 118475929
chr1 229341253 229341263 LHX2 JASPAR yes 118475930
chr1 229341253 229341263 MEOX1 JASPAR yes 118475931
chr1 229341253 229341263 MEOX2 JASPAR yes 118475932
chr1 229341253 229341263 MNX1 JASPAR yes 118475933
chr1 229341254 229341262 LBX1 JASPAR yes 35974106
chr1 229341254 229341262 PDX1 JASPAR yes 35974107
chr1 229341254 229341262 VAX1 JASPAR yes 35974108
chr1 229341254 229341262 VAX2 JASPAR yes 35974109
chr1 229341254 229341262 VSX1 JASPAR yes 35974110
chr1 229341254 229341262 VSX2 JASPAR yes 35974111
chr1 229341254 229341262 LBX1 JASPAR yes 118475934
chr1 229341254 229341262 PDX1 JASPAR yes 118475935
chr1 229341254 229341262 VAX1 JASPAR yes 118475936
chr1 229341254 229341262 VAX2 JASPAR yes 118475937
chr1 229341254 229341262 VSX1 JASPAR yes 118475938
chr1 229341254 229341262 VSX2 JASPAR yes 118475939
chr1 229341254 229341264 POU6F2 JASPAR yes 35974112
chr1 229341254 229341264 POU6F2 JASPAR yes 118475940
chr1 229341256 229341267 FOS JASPAR yes 35974113
chr1 229341256 229341267 FOS JASPAR yes 118475941
chr1 229341257 229341266 JDP2 JASPAR yes 35974114
chr1 229341257 229341266 JDP2 JASPAR yes 118475942
chr1 229341257 229341268 FOSL2 JASPAR yes 35974115
chr1 229341257 229341268 FOSL2 JASPAR yes 118475943
chr1 229341257 229341271 JUN JASPAR yes 35974116
chr1 229341257 229341271 JUN JASPAR yes 118475944
chr1 229341260 229341277 PAX1 JASPAR yes 35974117
chr1 229341260 229341277 PAX9 JASPAR yes 35974118
chr1 229341260 229341277 PAX1 JASPAR yes 118475945
chr1 229341260 229341277 PAX9 JASPAR yes 118475946
chr1 229341261 229341280 PAX5 JASPAR yes 35974119
chr1 229341261 229341280 PAX5 JASPAR yes 118475947
chr1 229341267 229341273 TCF4 TRANSFAC yes 35974120
chr1 229341267 229341273 TCF4 TRANSFAC yes 118475948
chr1 229341281 229341289 FOXO3 JASPAR yes 35974121
chr1 229341281 229341289 FOXO3 JASPAR yes 118475949
chr1 229341309 229341329 TP53 JASPAR yes 35974122
chr1 229341309 229341329 TP53 JASPAR yes 118475950
chr1 229341312 229341330 TP53 JASPAR yes 35974123
chr1 229341312 229341330 TP53 JASPAR yes 118475951
chr1 229341313 229341328 TP53 JASPAR yes 35974124
chr1 229341313 229341328 TP53 JASPAR yes 118475952
chr1 229341324 229341328 YY1 TRANSFAC yes 35974125
chr1 229341324 229341328 YY1 TRANSFAC yes 118475953
chr1 229341325 229341335 NFIA JASPAR yes 35974126
chr1 229341325 229341335 NFIA JASPAR yes 118475954
chr1 229341326 229341335 NFIX JASPAR yes 35974127
chr1 229341326 229341335 NFIX JASPAR yes 118475955
chr1 229341327 229341333 NFIC JASPAR yes 35974128
chr1 229341327 229341333 NFIC JASPAR yes 118475956
chr1 229341328 229341340 HES5 JASPAR yes 35974129
chr1 229341328 229341340 HES7 JASPAR yes 35974130
chr1 229341328 229341340 HES5 JASPAR yes 118475957
chr1 229341328 229341340 HES7 JASPAR yes 118475958
chr1 229341329 229341339 BHLHE40 JASPAR yes 35974131
chr1 229341329 229341339 CLOCK JASPAR yes 35974132
chr1 229341329 229341339 HEY1 JASPAR yes 35974133
chr1 229341329 229341339 HEY2 JASPAR yes 35974134
chr1 229341329 229341339 MAX JASPAR yes 35974135
chr1 229341329 229341339 MNT JASPAR yes 35974136
chr1 229341329 229341339 BHLHE40 JASPAR yes 118475959
chr1 229341329 229341339 CLOCK JASPAR yes 118475960
chr1 229341329 229341339 HEY1 JASPAR yes 118475961
chr1 229341329 229341339 HEY2 JASPAR yes 118475962
chr1 229341329 229341339 MAX JASPAR yes 118475963
chr1 229341329 229341339 MNT JASPAR yes 118475964
chr1 229341331 229341336 MYC TRANSFAC yes 35974137
chr1 229341331 229341336 USF1 TRANSFAC yes 35974138
chr1 229341331 229341336 USF2 TRANSFAC yes 35974139
chr1 229341331 229341336 MYC TRANSFAC yes 118475965
chr1 229341331 229341336 USF1 TRANSFAC yes 118475966
chr1 229341331 229341336 USF2 TRANSFAC yes 118475967
chr1 229341360 229341364 TEAD2 TRANSFAC yes 35974140
chr1 229341360 229341364 TEAD2 TRANSFAC yes 118475968
chr1 229341360 229341365 TBP TRANSFAC yes 35974141
chr1 229341360 229341365 TBP TRANSFAC yes 118475969
chr1 229341360 229341366 TMF TRANSFAC yes 35974142
chr1 229341360 229341366 TMF TRANSFAC yes 118475970
chr1 229341370 229341376 MYC TRANSFAC yes 35974143
chr1 229341370 229341376 MYC TRANSFAC yes 118475971
SNP sites on vista5461[chr1:229341143-229341392]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 229341296 rs10916447 A G no 1009205
Genes possibly regulated by vista5461[chr1:229341143-229341392]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 229385383 229387557 + TMEM78 ENSG00000177800.2 229385383 0.93 0.96 1928 56009
chr1 229406822 229441641 + RAB4A ENSG00000168118.7 229406822 0.61 1.0 1929 34570
chr1 229440129 229441248 + SPHAR ENSG00000213029.2 229440129 0.0 0.0 1930 1263
Expression level of Genes
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miRNAs possibly regulated by vista5461[chr1:229341143-229341392]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results