EnhancerDB
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  3. vista547[chr1:17254357-17254559]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista547[chr1:17254357-17254559]
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Tissue distribution of vista547
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Transcription factor that possibly regulate vista547[chr1:17254357-17254559]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 17254348 17254363 HNF4A JASPAR yes 27065963
chr1 17254348 17254363 HNF4A JASPAR yes 118240037
chr1 17254372 17254385 NFKB1 JASPAR yes 27065964
chr1 17254372 17254385 NFKB2 JASPAR yes 27065965
chr1 17254372 17254385 NFKB1 JASPAR yes 118240038
chr1 17254372 17254385 NFKB2 JASPAR yes 118240039
chr1 17254373 17254384 NFKB1 JASPAR yes 27065966
chr1 17254373 17254384 NFKB1 JASPAR yes 118240040
chr1 17254374 17254379 ETS2 TRANSFAC yes 27065967
chr1 17254374 17254379 ETS2 TRANSFAC yes 118240041
chr1 17254374 17254384 NFKB1 JASPAR yes 27065968
chr1 17254374 17254384 RELA JASPAR yes 27065969
chr1 17254374 17254384 NFKB1 JASPAR yes 118240042
chr1 17254374 17254384 RELA JASPAR yes 118240043
chr1 17254374 17254385 NFKB1 JASPAR yes 27065970
chr1 17254374 17254385 NFKB1 JASPAR yes 118240044
chr1 17254401 17254419 NFYA JASPAR yes 27065971
chr1 17254401 17254419 NFYA JASPAR yes 118240045
chr1 17254404 17254420 NFYA JASPAR yes 27065972
chr1 17254404 17254420 NFYA JASPAR yes 118240046
chr1 17254407 17254422 NFYB JASPAR yes 27065973
chr1 17254407 17254422 NFYB JASPAR yes 118240047
chr1 17254413 17254418 SP1 TRANSFAC yes 27065974
chr1 17254413 17254418 SP1 TRANSFAC yes 118240048
chr1 17254425 17254437 HES5 JASPAR yes 27065975
chr1 17254425 17254437 HES5 JASPAR yes 118240049
chr1 17254426 17254436 BHLHE40 JASPAR yes 27065976
chr1 17254426 17254436 CLOCK JASPAR yes 27065977
chr1 17254426 17254436 HEY1 JASPAR yes 27065978
chr1 17254426 17254436 HEY2 JASPAR yes 27065979
chr1 17254426 17254436 MNT JASPAR yes 27065980
chr1 17254426 17254436 BHLHE40 JASPAR yes 118240050
chr1 17254426 17254436 CLOCK JASPAR yes 118240051
chr1 17254426 17254436 HEY1 JASPAR yes 118240052
chr1 17254426 17254436 HEY2 JASPAR yes 118240053
chr1 17254426 17254436 MNT JASPAR yes 118240054
chr1 17254427 17254437 MAX JASPAR yes 27065981
chr1 17254427 17254437 MAX JASPAR yes 118240055
chr1 17254428 17254433 MYC TRANSFAC yes 27065982
chr1 17254428 17254433 USF1 TRANSFAC yes 27065983
chr1 17254428 17254433 USF2 TRANSFAC yes 27065984
chr1 17254428 17254433 MYC TRANSFAC yes 118240056
chr1 17254428 17254433 USF1 TRANSFAC yes 118240057
chr1 17254428 17254433 USF2 TRANSFAC yes 118240058
chr1 17254438 17254448 SP1 JASPAR yes 27065985
chr1 17254438 17254448 SP1 JASPAR yes 118240059
chr1 17254438 17254459 ZNF263 JASPAR yes 27065986
chr1 17254438 17254459 ZNF263 JASPAR yes 118240060
chr1 17254439 17254449 SP1 JASPAR yes 27065987
chr1 17254439 17254449 SP1 JASPAR yes 118240061
chr1 17254441 17254446 SP1 TRANSFAC yes 27065988
chr1 17254441 17254446 SP1 TRANSFAC yes 118240062
chr1 17254443 17254453 SP1 JASPAR yes 27065989
chr1 17254443 17254453 SP1 JASPAR yes 118240063
chr1 17254446 17254451 SP1 TRANSFAC yes 27065990
chr1 17254446 17254451 SP1 TRANSFAC yes 118240064
chr1 17254451 17254471 TP53 JASPAR yes 27065991
chr1 17254451 17254471 TP53 JASPAR yes 118240065
chr1 17254466 17254472 SOX10 JASPAR yes 27065992
chr1 17254466 17254472 SOX10 JASPAR yes 118240066
chr1 17254487 17254505 MAFF JASPAR yes 27065993
chr1 17254487 17254505 MAFF JASPAR yes 118240067
chr1 17254488 17254503 MAFK JASPAR yes 27065994
chr1 17254488 17254503 MAFK JASPAR yes 118240068
chr1 17254495 17254505 BHLHE22 JASPAR yes 27065995
chr1 17254495 17254505 NEUROD2 JASPAR yes 27065996
chr1 17254495 17254505 OLIG1 JASPAR yes 27065997
chr1 17254495 17254505 OLIG2 JASPAR yes 27065998
chr1 17254495 17254505 OLIG3 JASPAR yes 27065999
chr1 17254495 17254505 BHLHE22 JASPAR yes 118240069
chr1 17254495 17254505 NEUROD2 JASPAR yes 118240070
chr1 17254495 17254505 OLIG1 JASPAR yes 118240071
chr1 17254495 17254505 OLIG2 JASPAR yes 118240072
chr1 17254495 17254505 OLIG3 JASPAR yes 118240073
chr1 17254504 17254508 ESR1 TRANSFAC yes 27066000
chr1 17254504 17254508 ESR1 TRANSFAC yes 118240074
chr1 17254514 17254527 TFAP2A JASPAR yes 27066001
chr1 17254514 17254527 TFAP2B JASPAR yes 27066002
chr1 17254514 17254527 TFAP2C JASPAR yes 27066003
chr1 17254514 17254527 TFAP2A JASPAR yes 118240075
chr1 17254514 17254527 TFAP2B JASPAR yes 118240076
chr1 17254514 17254527 TFAP2C JASPAR yes 118240077
chr1 17254522 17254526 LFA1 TRANSFAC yes 27066004
chr1 17254522 17254526 LFA1 TRANSFAC yes 118240078
chr1 17254540 17254543 MYB TRANSFAC yes 27066005
chr1 17254540 17254543 MYB TRANSFAC yes 118240079
chr1 17254545 17254559 TLX1 JASPAR yes 27066006
chr1 17254545 17254559 TLX1 JASPAR yes 118240080
SNP sites on vista547[chr1:17254357-17254559]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 17254405 rs546209707 C T
NFYA
114963
chr1 17254439 rs573424656 G A
SP1 ZNF263
114964
chr1 17254513 rs146652978 C T no 114965
Genes possibly regulated by vista547[chr1:17254357-17254559]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 17300997 17307330 - MFAP2 ENSG00000117122.9 17307330 0.89 1.0 238 47229
chr1 17312453 17338423 - ATP13A2 ENSG00000159363.13 17338423 0.65 1.0 239 16136
Expression level of Genes
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miRNAs possibly regulated by vista547[chr1:17254357-17254559]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results