EnhancerDB
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  3. vista54721[chr7:191531-191871]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista54721[chr7:191531-191871]
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Tissue distribution of vista54721
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Transcription factor that possibly regulate vista54721[chr7:191531-191871]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr7 191532 191536 LFA1 TRANSFAC yes 26007826
chr7 191550 191562 TFAP2A JASPAR yes 26007827
chr7 191551 191562 TFAP2A JASPAR yes 26007828
chr7 191575 191585 SP1 JASPAR yes 26007829
chr7 191614 191631 RARA JASPAR yes 26007830
chr7 191621 191634 DUXA JASPAR yes 26007831
chr7 191626 191629 MYB TRANSFAC yes 26007832
chr7 191645 191664 REST JASPAR yes 26007833
chr7 191680 191692 TAL1 JASPAR yes 26007834
chr7 191681 191693 NHLH1 JASPAR yes 26007835
chr7 191682 191692 FIGLA JASPAR yes 26007836
chr7 191682 191692 MSC JASPAR yes 26007837
chr7 191682 191692 TFAP4 JASPAR yes 26007838
chr7 191682 191694 TAL1 JASPAR yes 26007839
chr7 191721 191733 PKNOX1 JASPAR yes 26007840
chr7 191721 191733 PKNOX2 JASPAR yes 26007841
chr7 191721 191733 TGIF1 JASPAR yes 26007842
chr7 191721 191733 TGIF2 JASPAR yes 26007843
chr7 191737 191747 BHLHE40 JASPAR yes 26007844
chr7 191737 191747 BHLHE41 JASPAR yes 26007845
chr7 191737 191747 MLXIPL JASPAR yes 26007846
chr7 191737 191747 MLX JASPAR yes 26007847
chr7 191737 191747 TFE3 JASPAR yes 26007848
chr7 191738 191758 TP63 JASPAR yes 26007849
chr7 191739 191744 MYC TRANSFAC yes 26007850
chr7 191739 191744 USF1 TRANSFAC yes 26007851
chr7 191739 191744 USF2 TRANSFAC yes 26007852
chr7 191739 191757 TP73 JASPAR yes 26007853
chr7 191740 191755 TP53 JASPAR yes 26007854
chr7 191786 191798 FOXI1 JASPAR yes 26007855
chr7 191790 191796 HiNF-A TRANSFAC yes 26007856
chr7 191796 191816 TP63 JASPAR yes 26007857
chr7 191822 191828 ZNF354C JASPAR yes 26007858
chr7 191832 191843 NRF1 JASPAR yes 26007859
chr7 191844 191864 TP63 JASPAR yes 26007860
SNP sites on vista54721[chr7:191531-191871]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr7 191564 rs67138589 A G no 9558528
chr7 191644 rs58213147 A C,T no 9558529
chr7 191783 rs150786171 G GCA no 9558530
chr7 191783 rs759358013 G GCA no 9558531
chr7 191790 rs150191227 CAA C
FOXI1 HiNF-A
9558532
chr7 191796 rs562928849 C G
FOXI1 HiNF-A TP63
9558533
chr7 191810 rs181493445 C A
TP63
9558534
chr7 191836 rs545356969 C T
NRF1
9558535
chr7 191845 rs560215373 A G
TP63
9558536
Genes possibly regulated by vista54721[chr7:191531-191871]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr7 192969 300711 + FAM20C ENSG00000177706.8 192969 0.79 1.0 7146 98902
chr7 227554 229557 - AC145676.2 ENSG00000249852.1 229557 0.92 0.95 7147 62314
Expression level of Genes
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miRNAs possibly regulated by vista54721[chr7:191531-191871]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results