EnhancerDB
  1. Home
  2. Enhancers
  3. vista54726[chr7:387969-388196]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista54726[chr7:387969-388196]
Back to top
Tissue distribution of vista54726
Back to top
Transcription factor that possibly regulate vista54726[chr7:387969-388196]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr7 387968 387981 SMAD2 JASPAR yes 12385958
chr7 387968 387981 SMAD2 JASPAR yes 26008045
chr7 387977 387996 REST JASPAR yes 12385959
chr7 387977 387996 REST JASPAR yes 26008046
chr7 387985 388000 AR JASPAR yes 12385960
chr7 387985 388000 AR JASPAR yes 26008047
chr7 388014 388024 SP1 JASPAR yes 12385961
chr7 388014 388024 SP1 JASPAR yes 26008048
chr7 388016 388020 LFA1 TRANSFAC yes 12385962
chr7 388016 388020 LFA1 TRANSFAC yes 26008049
chr7 388033 388041 SP1 TRANSFAC yes 12385963
chr7 388033 388041 SP1 TRANSFAC yes 26008050
chr7 388035 388041 MAZ TRANSFAC yes 12385964
chr7 388035 388041 MAZ TRANSFAC yes 26008051
chr7 388045 388060 RFX5 JASPAR yes 12385965
chr7 388045 388060 RFX5 JASPAR yes 26008052
chr7 388076 388090 ONECUT3 JASPAR yes 12385966
chr7 388076 388090 ONECUT3 JASPAR yes 26008053
chr7 388082 388086 H1TF2 TRANSFAC yes 12385967
chr7 388082 388086 NFE TRANSFAC yes 12385968
chr7 388082 388086 SRF TRANSFAC yes 12385969
chr7 388082 388086 H1TF2 TRANSFAC yes 26008054
chr7 388082 388086 NFE TRANSFAC yes 26008055
chr7 388082 388086 SRF TRANSFAC yes 26008056
chr7 388085 388093 FEV JASPAR yes 12385970
chr7 388085 388093 FEV JASPAR yes 26008057
chr7 388087 388094 SPIB JASPAR yes 12385971
chr7 388087 388094 SPIB JASPAR yes 26008058
chr7 388100 388115 RUNX2 JASPAR yes 12385972
chr7 388100 388115 RUNX2 JASPAR yes 26008059
chr7 388106 388115 HIC2 JASPAR yes 12385973
chr7 388106 388115 HIC2 JASPAR yes 26008060
chr7 388109 388113 LFA1 TRANSFAC yes 12385974
chr7 388109 388113 LFA1 TRANSFAC yes 26008061
chr7 388133 388136 MYB TRANSFAC yes 12385975
chr7 388133 388136 MYB TRANSFAC yes 26008062
chr7 388137 388150 DUXA JASPAR yes 12385976
chr7 388137 388150 DUXA JASPAR yes 26008063
chr7 388138 388149 PHOX2A JASPAR yes 12385977
chr7 388138 388149 PHOX2A JASPAR yes 26008064
chr7 388139 388149 PAX3 JASPAR yes 12385978
chr7 388139 388149 PAX7 JASPAR yes 12385979
chr7 388139 388149 PAX3 JASPAR yes 26008065
chr7 388139 388149 PAX7 JASPAR yes 26008066
chr7 388140 388151 HOXA10 JASPAR yes 12385980
chr7 388140 388151 HOXA10 JASPAR yes 26008067
chr7 388141 388151 EMX1 JASPAR yes 12385981
chr7 388141 388151 EMX2 JASPAR yes 12385982
chr7 388141 388151 ESX1 JASPAR yes 12385983
chr7 388141 388151 EVX2 JASPAR yes 12385984
chr7 388141 388151 HOXA2 JASPAR yes 12385985
chr7 388141 388151 HOXB2 JASPAR yes 12385986
chr7 388141 388151 HOXB3 JASPAR yes 12385987
chr7 388141 388151 LHX6 JASPAR yes 12385988
chr7 388141 388151 MEOX1 JASPAR yes 12385989
chr7 388141 388151 MEOX2 JASPAR yes 12385990
chr7 388141 388151 MNX1 JASPAR yes 12385991
chr7 388141 388151 NOTO JASPAR yes 12385992
chr7 388141 388151 POU6F1 JASPAR yes 12385993
chr7 388141 388151 RAX JASPAR yes 12385994
chr7 388141 388151 EMX1 JASPAR yes 26008068
chr7 388141 388151 EMX2 JASPAR yes 26008069
chr7 388141 388151 ESX1 JASPAR yes 26008070
chr7 388141 388151 EVX2 JASPAR yes 26008071
chr7 388141 388151 HOXA2 JASPAR yes 26008072
chr7 388141 388151 HOXB2 JASPAR yes 26008073
chr7 388141 388151 HOXB3 JASPAR yes 26008074
chr7 388141 388151 LHX6 JASPAR yes 26008075
chr7 388141 388151 MEOX1 JASPAR yes 26008076
chr7 388141 388151 MEOX2 JASPAR yes 26008077
chr7 388141 388151 MNX1 JASPAR yes 26008078
chr7 388141 388151 NOTO JASPAR yes 26008079
chr7 388141 388151 POU6F1 JASPAR yes 26008080
chr7 388141 388151 RAX JASPAR yes 26008081
chr7 388142 388150 LMX1A JASPAR yes 12385995
chr7 388142 388150 LMX1B JASPAR yes 12385996
chr7 388142 388150 NKX6-1 JASPAR yes 12385997
chr7 388142 388150 NKX6-2 JASPAR yes 12385998
chr7 388142 388150 PDX1 JASPAR yes 12385999
chr7 388142 388150 VAX1 JASPAR yes 12386000
chr7 388142 388150 VAX2 JASPAR yes 12386001
chr7 388142 388150 VSX1 JASPAR yes 12386002
chr7 388142 388150 LMX1A JASPAR yes 26008082
chr7 388142 388150 LMX1B JASPAR yes 26008083
chr7 388142 388150 NKX6-1 JASPAR yes 26008084
chr7 388142 388150 NKX6-2 JASPAR yes 26008085
chr7 388142 388150 PDX1 JASPAR yes 26008086
chr7 388142 388150 VAX1 JASPAR yes 26008087
chr7 388142 388150 VAX2 JASPAR yes 26008088
chr7 388142 388150 VSX1 JASPAR yes 26008089
chr7 388149 388164 NR2C2 JASPAR yes 12386003
chr7 388149 388164 NR2C2 JASPAR yes 26008090
chr7 388151 388168 RXRA JASPAR yes 12386004
chr7 388151 388168 RXRA JASPAR yes 26008091
chr7 388152 388156 LFA1 TRANSFAC yes 12386005
chr7 388152 388156 LFA1 TRANSFAC yes 26008092
chr7 388157 388170 ZBTB18 JASPAR yes 12386006
chr7 388157 388170 ZBTB18 JASPAR yes 26008093
chr7 388159 388168 SNAI2 JASPAR yes 12386007
chr7 388159 388168 SNAI2 JASPAR yes 26008094
chr7 388159 388169 FIGLA JASPAR yes 12386008
chr7 388159 388169 ID4 JASPAR yes 12386009
chr7 388159 388169 MSC JASPAR yes 12386010
chr7 388159 388169 TCF3 JASPAR yes 12386011
chr7 388159 388169 TCF4 JASPAR yes 12386012
chr7 388159 388169 FIGLA JASPAR yes 26008095
chr7 388159 388169 ID4 JASPAR yes 26008096
chr7 388159 388169 MSC JASPAR yes 26008097
chr7 388159 388169 TCF3 JASPAR yes 26008098
chr7 388159 388169 TCF4 JASPAR yes 26008099
chr7 388172 388193 IRF1 JASPAR yes 12386013
chr7 388172 388193 IRF1 JASPAR yes 26008100
chr7 388174 388189 STAT2 JASPAR yes 12386014
chr7 388174 388189 STAT2 JASPAR yes 26008101
chr7 388175 388189 STAT1 JASPAR yes 12386015
chr7 388175 388189 STAT1 JASPAR yes 26008102
SNP sites on vista54726[chr7:387969-388196]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr7 388033 rs148108647 G A
SP1
9560316
chr7 388068 rs185478593 C A no 9560317
chr7 388084 rs141967026 C T
H1TF2 NFE ONECUT3 SRF
9560318
chr7 388177 rs146121608 G A
IRF1 STAT1 STAT2
9560319
Genes possibly regulated by vista54726[chr7:387969-388196]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr7 302918 304070 + AC187652.1 ENSG00000269396.1 302918 0.94 1.0 7148 14949
Expression level of Genes
Back to top
miRNAs possibly regulated by vista54726[chr7:387969-388196]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results