EnhancerDB
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  3. vista54734[chr7:525455-525590]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista54734[chr7:525455-525590]
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Tissue distribution of vista54734
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Transcription factor that possibly regulate vista54734[chr7:525455-525590]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr7 525457 525468 FOXH1 JASPAR yes 12399470
chr7 525457 525468 FOXH1 JASPAR yes 26008391
chr7 525496 525501 SP1 TRANSFAC yes 12399471
chr7 525496 525501 SP1 TRANSFAC yes 26008392
chr7 525500 525504 H1TF2 TRANSFAC yes 12399472
chr7 525500 525504 NFE TRANSFAC yes 12399473
chr7 525500 525504 SRF TRANSFAC yes 12399474
chr7 525500 525504 H1TF2 TRANSFAC yes 26008393
chr7 525500 525504 NFE TRANSFAC yes 26008394
chr7 525500 525504 SRF TRANSFAC yes 26008395
chr7 525505 525515 TCF4 JASPAR yes 12399475
chr7 525505 525515 TCF4 JASPAR yes 26008396
chr7 525507 525516 ZEB1 JASPAR yes 12399476
chr7 525507 525516 ZEB1 JASPAR yes 26008397
chr7 525509 525514 SP1 TRANSFAC yes 12399477
chr7 525509 525514 SP1 TRANSFAC yes 26008398
chr7 525512 525522 SP1 JASPAR yes 12399478
chr7 525512 525522 SP1 JASPAR yes 26008399
chr7 525513 525517 LFA1 TRANSFAC yes 12399479
chr7 525513 525517 LFA1 TRANSFAC yes 26008400
chr7 525518 525524 MAZ TRANSFAC yes 12399480
chr7 525518 525524 MAZ TRANSFAC yes 26008401
chr7 525520 525532 HINFP JASPAR yes 12399481
chr7 525520 525532 HINFP JASPAR yes 26008402
chr7 525526 525541 ZIC3 JASPAR yes 12399482
chr7 525526 525541 ZIC4 JASPAR yes 12399483
chr7 525526 525541 ZIC3 JASPAR yes 26008403
chr7 525526 525541 ZIC4 JASPAR yes 26008404
chr7 525527 525541 GLIS2 JASPAR yes 12399484
chr7 525527 525541 GLIS3 JASPAR yes 12399485
chr7 525527 525541 GLIS2 JASPAR yes 26008405
chr7 525527 525541 GLIS3 JASPAR yes 26008406
chr7 525533 525539 MAZ TRANSFAC yes 12399486
chr7 525533 525539 MAZ TRANSFAC yes 26008407
chr7 525533 525544 E2F6 JASPAR yes 12399487
chr7 525533 525544 E2F6 JASPAR yes 26008408
chr7 525535 525543 SP1 TRANSFAC yes 12399488
chr7 525535 525543 SP1 TRANSFAC yes 26008409
chr7 525535 525545 SP1 JASPAR yes 12399489
chr7 525535 525545 SP1 JASPAR yes 26008410
chr7 525537 525543 MAZ TRANSFAC yes 12399490
chr7 525537 525543 MAZ TRANSFAC yes 26008411
chr7 525543 525564 ZNF263 JASPAR yes 12399491
chr7 525543 525564 ZNF263 JASPAR yes 26008412
chr7 525555 525560 GATA2 JASPAR yes 12399492
chr7 525555 525560 GATA2 JASPAR yes 26008413
chr7 525564 525576 TEAD1 JASPAR yes 12399493
chr7 525564 525576 TEAD1 JASPAR yes 26008414
chr7 525566 525576 TEAD1 JASPAR yes 12399494
chr7 525566 525576 TEAD4 JASPAR yes 12399495
chr7 525566 525576 TEAD1 JASPAR yes 26008415
chr7 525566 525576 TEAD4 JASPAR yes 26008416
chr7 525567 525575 TEAD3 JASPAR yes 12399496
chr7 525567 525575 TEAD3 JASPAR yes 26008417
chr7 525590 525596 YY1 JASPAR yes 12399497
chr7 525590 525596 YY1 JASPAR yes 26008418
SNP sites on vista54734[chr7:525455-525590]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr7 525518 rs62433270 A G
MAZ SP1
9562414
chr7 525543 rs144414489 G A
E2F6 MAZ SP1 ZNF263
9562415
chr7 525577 rs191594332 C T no 9562416
Genes possibly regulated by vista54734[chr7:525455-525590]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr7 536895 559933 - PDGFA ENSG00000197461.9 559933 0.72 1.0 7149 65657
Expression level of Genes
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miRNAs possibly regulated by vista54734[chr7:525455-525590]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results