EnhancerDB
  1. Home
  2. Enhancers
  3. vista54736[chr7:554641-554853]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista54736[chr7:554641-554853]
Back to top
Tissue distribution of vista54736
Back to top
Transcription factor that possibly regulate vista54736[chr7:554641-554853]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr7 554669 554684 HNF4G JASPAR yes 12401777
chr7 554669 554684 HNF4G JASPAR yes 26008456
chr7 554680 554698 ESR1 JASPAR yes 12401778
chr7 554680 554698 ESR1 JASPAR yes 26008457
chr7 554687 554693 SOX10 JASPAR yes 12401779
chr7 554687 554693 SOX10 JASPAR yes 26008458
chr7 554693 554703 SP1 JASPAR yes 12401780
chr7 554693 554703 SP1 JASPAR yes 26008459
chr7 554697 554706 ZEB1 JASPAR yes 12401781
chr7 554697 554706 ZEB1 JASPAR yes 26008460
chr7 554698 554708 FIGLA JASPAR yes 12401782
chr7 554698 554708 TCF4 JASPAR yes 12401783
chr7 554698 554708 FIGLA JASPAR yes 26008461
chr7 554698 554708 TCF4 JASPAR yes 26008462
chr7 554700 554705 USF2 TRANSFAC yes 12401784
chr7 554700 554705 USF2 TRANSFAC yes 26008463
chr7 554705 554715 SP1 JASPAR yes 12401785
chr7 554705 554715 SP1 JASPAR yes 26008464
chr7 554709 554727 MAFF JASPAR yes 12401786
chr7 554709 554727 MAFF JASPAR yes 26008465
chr7 554714 554725 NRL JASPAR yes 12401787
chr7 554714 554725 NRL JASPAR yes 26008466
chr7 554731 554745 EBF1 JASPAR yes 12401788
chr7 554731 554745 EBF1 JASPAR yes 26008467
chr7 554778 554791 TFAP2B JASPAR yes 12401789
chr7 554778 554791 TFAP2C JASPAR yes 12401790
chr7 554778 554791 TFAP2B JASPAR yes 26008468
chr7 554778 554791 TFAP2C JASPAR yes 26008469
chr7 554794 554804 NFIA JASPAR yes 12401791
chr7 554794 554804 NFIA JASPAR yes 26008470
chr7 554796 554802 NFIC JASPAR yes 12401792
chr7 554796 554802 NFIC JASPAR yes 26008471
chr7 554802 554815 ZBTB18 JASPAR yes 12401793
chr7 554802 554815 ZBTB18 JASPAR yes 26008472
chr7 554822 554826 TEAD2 TRANSFAC yes 12401794
chr7 554822 554826 TEAD2 TRANSFAC yes 26008473
chr7 554822 554827 TBP TRANSFAC yes 12401795
chr7 554822 554827 TBP TRANSFAC yes 26008474
SNP sites on vista54736[chr7:554641-554853]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr7 554715 rs545301652 G A
MAFF NRL SP1
9562749
chr7 554788 rs148701566 G A
TFAP2B TFAP2C
9562750
chr7 554848 rs111487889 C T no 9562751
Genes possibly regulated by vista54736[chr7:554641-554853]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr7 536895 559933 - PDGFA ENSG00000197461.9 559933 0.72 1.0 7149 94920
Expression level of Genes
Back to top
miRNAs possibly regulated by vista54736[chr7:554641-554853]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results