EnhancerDB
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  3. vista54737[chr7:555332-555565]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista54737[chr7:555332-555565]
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Tissue distribution of vista54737
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Transcription factor that possibly regulate vista54737[chr7:555332-555565]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr7 555357 555378 IRF1 JASPAR yes 12401854
chr7 555357 555378 IRF1 JASPAR yes 26008475
chr7 555361 555375 STAT1 JASPAR yes 12401855
chr7 555361 555375 STAT1 JASPAR yes 26008476
chr7 555361 555376 STAT2 JASPAR yes 12401856
chr7 555361 555376 STAT2 JASPAR yes 26008477
chr7 555369 555389 TP63 JASPAR yes 12401857
chr7 555369 555389 TP63 JASPAR yes 26008478
chr7 555391 555395 LFA1 TRANSFAC yes 12401858
chr7 555391 555395 LFA1 TRANSFAC yes 26008479
chr7 555397 555412 FOXP1 JASPAR yes 12401859
chr7 555397 555412 FOXP1 JASPAR yes 26008480
chr7 555398 555409 FOXP2 JASPAR yes 12401860
chr7 555398 555409 FOXP2 JASPAR yes 26008481
chr7 555433 555442 TFAP2A JASPAR yes 12401861
chr7 555433 555442 TFAP2A JASPAR yes 26008482
chr7 555441 555453 TEAD1 JASPAR yes 12401862
chr7 555441 555453 TEAD1 JASPAR yes 26008483
chr7 555443 555453 TEAD1 JASPAR yes 12401863
chr7 555443 555453 TEAD4 JASPAR yes 12401864
chr7 555443 555453 TEAD1 JASPAR yes 26008484
chr7 555443 555453 TEAD4 JASPAR yes 26008485
chr7 555444 555452 TEAD3 JASPAR yes 12401865
chr7 555444 555452 TEAD3 JASPAR yes 26008486
chr7 555450 555456 YY1 JASPAR yes 12401866
chr7 555450 555456 YY1 JASPAR yes 26008487
chr7 555453 555462 POU3F4 JASPAR yes 12401867
chr7 555453 555462 POU5F1B JASPAR yes 12401868
chr7 555453 555462 POU3F4 JASPAR yes 26008488
chr7 555453 555462 POU5F1B JASPAR yes 26008489
chr7 555495 555500 SP1 TRANSFAC yes 12401869
chr7 555495 555500 SP1 TRANSFAC yes 26008490
chr7 555496 555506 ZNF740 JASPAR yes 12401870
chr7 555496 555506 ZNF740 JASPAR yes 26008491
chr7 555498 555519 ZNF263 JASPAR yes 12401871
chr7 555498 555519 ZNF263 JASPAR yes 26008492
chr7 555507 555517 SP1 JASPAR yes 12401872
chr7 555507 555517 SP1 JASPAR yes 26008493
chr7 555509 555514 SP1 TRANSFAC yes 12401873
chr7 555509 555514 SP1 TRANSFAC yes 26008494
chr7 555510 555515 SP1 TRANSFAC yes 12401874
chr7 555510 555515 SP1 TRANSFAC yes 26008495
chr7 555510 555516 SP1 TRANSFAC yes 12401875
chr7 555510 555516 SP1 TRANSFAC yes 26008496
chr7 555513 555524 E2F1 JASPAR yes 12401876
chr7 555513 555524 E2F1 JASPAR yes 26008497
chr7 555543 555564 IRF1 JASPAR yes 12401877
chr7 555543 555564 IRF1 JASPAR yes 26008498
chr7 555546 555560 IRF7 JASPAR yes 12401878
chr7 555546 555560 IRF7 JASPAR yes 26008499
chr7 555547 555562 PRDM1 JASPAR yes 12401879
chr7 555547 555562 PRDM1 JASPAR yes 26008500
chr7 555562 555566 YY1 TRANSFAC yes 12401880
chr7 555562 555566 YY1 TRANSFAC yes 26008501
chr7 555562 555577 STAT1 JASPAR yes 12401881
chr7 555562 555577 STAT1 JASPAR yes 26008502
chr7 555564 555575 STAT3 JASPAR yes 12401882
chr7 555564 555575 STAT3 JASPAR yes 26008503
SNP sites on vista54737[chr7:555332-555565]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr7 555402 rs398110964 G GT
FOXP1 FOXP2
9562763
chr7 555402 rs75013327 G GT
FOXP1 FOXP2
9562764
chr7 555518 rs146919000 C T
E2F1 ZNF263
9562765
Genes possibly regulated by vista54737[chr7:555332-555565]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr7 536895 559933 - PDGFA ENSG00000197461.9 559933 0.72 1.0 7149 95632
Expression level of Genes
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miRNAs possibly regulated by vista54737[chr7:555332-555565]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results