EnhancerDB
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  3. vista54738[chr7:556288-556672]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista54738[chr7:556288-556672]
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Tissue distribution of vista54738
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Transcription factor that possibly regulate vista54738[chr7:556288-556672]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr7 556274 556288 PLAG1 JASPAR yes 12402007
chr7 556274 556288 PLAG1 JASPAR yes 26008504
chr7 556289 556295 SP1 TRANSFAC yes 12402008
chr7 556289 556295 SP1 TRANSFAC yes 26008505
chr7 556289 556299 SP1 JASPAR yes 12402009
chr7 556289 556299 ZNF740 JASPAR yes 12402010
chr7 556289 556299 SP1 JASPAR yes 26008506
chr7 556289 556299 ZNF740 JASPAR yes 26008507
chr7 556290 556301 E2F6 JASPAR yes 12402011
chr7 556290 556301 E2F6 JASPAR yes 26008508
chr7 556300 556314 PLAG1 JASPAR yes 12402012
chr7 556300 556314 PLAG1 JASPAR yes 26008509
chr7 556300 556316 ZNF143 JASPAR yes 12402013
chr7 556300 556316 ZNF143 JASPAR yes 26008510
chr7 556307 556311 H4TF2 TRANSFAC yes 12402014
chr7 556307 556311 H4TF2 TRANSFAC yes 26008511
chr7 556314 556325 NFKB1 JASPAR yes 12402015
chr7 556314 556325 NFKB1 JASPAR yes 26008512
chr7 556317 556321 H4TF2 TRANSFAC yes 12402016
chr7 556317 556321 H4TF2 TRANSFAC yes 26008513
chr7 556317 556331 ZIC1 JASPAR yes 12402017
chr7 556317 556331 ZIC1 JASPAR yes 26008514
chr7 556317 556332 ZIC3 JASPAR yes 12402018
chr7 556317 556332 ZIC4 JASPAR yes 12402019
chr7 556317 556332 ZIC3 JASPAR yes 26008515
chr7 556317 556332 ZIC4 JASPAR yes 26008516
chr7 556342 556345 MYB TRANSFAC yes 12402020
chr7 556342 556345 MYB TRANSFAC yes 26008517
chr7 556342 556356 NR2F1 JASPAR yes 12402021
chr7 556342 556356 NR2F1 JASPAR yes 26008518
chr7 556347 556356 NFIX JASPAR yes 12402022
chr7 556347 556356 NFIX JASPAR yes 26008519
chr7 556349 556355 NFIC JASPAR yes 12402023
chr7 556349 556355 NFIC JASPAR yes 26008520
chr7 556386 556405 CTCF JASPAR yes 12402024
chr7 556386 556405 CTCF JASPAR yes 26008521
chr7 556402 556417 TFAP2A JASPAR yes 12402025
chr7 556402 556417 TFAP2C JASPAR yes 12402026
chr7 556402 556417 TFAP2A JASPAR yes 26008522
chr7 556402 556417 TFAP2C JASPAR yes 26008523
chr7 556405 556416 EBF1 JASPAR yes 12402027
chr7 556405 556416 EBF1 JASPAR yes 26008524
chr7 556406 556415 TFAP2A JASPAR yes 12402028
chr7 556406 556415 TFAP2A JASPAR yes 26008525
chr7 556407 556416 TFAP2A JASPAR yes 12402029
chr7 556407 556416 TFAP2A JASPAR yes 26008526
chr7 556410 556425 TFAP2C JASPAR yes 12402030
chr7 556410 556425 TFAP2C JASPAR yes 26008527
chr7 556412 556427 TFAP2A JASPAR yes 12402031
chr7 556412 556427 TFAP2A JASPAR yes 26008528
chr7 556414 556423 TFAP2A JASPAR yes 12402032
chr7 556414 556423 TFAP2A JASPAR yes 26008529
chr7 556427 556442 MEF2A JASPAR yes 12402033
chr7 556427 556442 MEF2A JASPAR yes 26008530
chr7 556434 556449 TFAP2A JASPAR yes 12402034
chr7 556434 556449 TFAP2A JASPAR yes 26008531
chr7 556435 556450 TFAP2C JASPAR yes 12402035
chr7 556435 556450 TFAP2C JASPAR yes 26008532
chr7 556436 556450 GLIS3 JASPAR yes 12402036
chr7 556436 556450 GLIS3 JASPAR yes 26008533
chr7 556437 556449 INSM1 JASPAR yes 12402037
chr7 556437 556449 TFAP2A JASPAR yes 12402038
chr7 556437 556449 TFAP2B JASPAR yes 12402039
chr7 556437 556449 TFAP2C JASPAR yes 12402040
chr7 556437 556449 INSM1 JASPAR yes 26008534
chr7 556437 556449 TFAP2A JASPAR yes 26008535
chr7 556437 556449 TFAP2B JASPAR yes 26008536
chr7 556437 556449 TFAP2C JASPAR yes 26008537
chr7 556437 556452 TFAP2A JASPAR yes 12402041
chr7 556437 556452 TFAP2A JASPAR yes 26008538
chr7 556439 556448 TFAP2A JASPAR yes 12402042
chr7 556439 556448 TFAP2A JASPAR yes 26008539
chr7 556447 556459 NHLH1 JASPAR yes 12402043
chr7 556447 556459 NHLH1 JASPAR yes 26008540
chr7 556448 556458 NHLH1 JASPAR yes 12402044
chr7 556448 556458 NHLH1 JASPAR yes 26008541
chr7 556476 556491 FOXP1 JASPAR yes 12402045
chr7 556476 556491 FOXP1 JASPAR yes 26008542
chr7 556479 556490 FOXP2 JASPAR yes 12402046
chr7 556479 556490 FOXP2 JASPAR yes 26008543
chr7 556480 556488 FOXO3 JASPAR yes 12402047
chr7 556480 556488 FOXO3 JASPAR yes 26008544
chr7 556481 556495 SPIC JASPAR yes 12402048
chr7 556481 556495 STAT1 JASPAR yes 12402049
chr7 556481 556495 SPIC JASPAR yes 26008545
chr7 556481 556495 STAT1 JASPAR yes 26008546
chr7 556481 556496 STAT2 JASPAR yes 12402050
chr7 556481 556496 STAT2 JASPAR yes 26008547
chr7 556521 556533 TFAP2A JASPAR yes 12402051
chr7 556521 556533 TFAP2B JASPAR yes 12402052
chr7 556521 556533 TFAP2C JASPAR yes 12402053
chr7 556521 556533 TFAP2A JASPAR yes 26008548
chr7 556521 556533 TFAP2B JASPAR yes 26008549
chr7 556521 556533 TFAP2C JASPAR yes 26008550
chr7 556521 556536 TFAP2A JASPAR yes 12402054
chr7 556521 556536 TFAP2C JASPAR yes 12402055
chr7 556521 556536 TFAP2A JASPAR yes 26008551
chr7 556521 556536 TFAP2C JASPAR yes 26008552
chr7 556566 556571 SP1 TRANSFAC yes 12402056
chr7 556566 556571 SP1 TRANSFAC yes 26008553
chr7 556566 556573 SP1 TRANSFAC yes 12402057
chr7 556566 556573 SP1 TRANSFAC yes 26008554
chr7 556566 556575 SP1 TRANSFAC yes 12402058
chr7 556566 556575 SP1 TRANSFAC yes 26008555
chr7 556573 556594 REST JASPAR yes 12402059
chr7 556573 556594 REST JASPAR yes 26008556
chr7 556581 556590 TFAP2A JASPAR yes 12402060
chr7 556581 556590 TFAP2A JASPAR yes 26008557
chr7 556585 556590 SP1 TRANSFAC yes 12402061
chr7 556585 556590 SP1 TRANSFAC yes 26008558
chr7 556595 556600 SP1 TRANSFAC yes 12402062
chr7 556595 556600 SP1 TRANSFAC yes 26008559
chr7 556597 556604 SP1 TRANSFAC yes 12402063
chr7 556597 556604 SP1 TRANSFAC yes 26008560
chr7 556599 556604 SP1 TRANSFAC yes 12402064
chr7 556599 556604 SP1 TRANSFAC yes 26008561
chr7 556601 556608 SP1 TRANSFAC yes 12402065
chr7 556601 556608 SP1 TRANSFAC yes 26008562
chr7 556603 556608 SP1 TRANSFAC yes 12402066
chr7 556603 556608 SP1 TRANSFAC yes 26008563
chr7 556627 556638 ESRRA JASPAR yes 12402067
chr7 556627 556638 ESRRA JASPAR yes 26008564
chr7 556629 556642 TFAP2A JASPAR yes 12402068
chr7 556629 556642 TFAP2B JASPAR yes 12402069
chr7 556629 556642 TFAP2C JASPAR yes 12402070
chr7 556629 556642 TFAP2A JASPAR yes 26008565
chr7 556629 556642 TFAP2B JASPAR yes 26008566
chr7 556629 556642 TFAP2C JASPAR yes 26008567
chr7 556629 556644 TFAP2A JASPAR yes 12402071
chr7 556629 556644 TFAP2C JASPAR yes 12402072
chr7 556629 556644 TFAP2A JASPAR yes 26008568
chr7 556629 556644 TFAP2C JASPAR yes 26008569
chr7 556630 556641 EBF1 JASPAR yes 12402073
chr7 556630 556641 EBF1 JASPAR yes 26008570
chr7 556636 556641 SP1 TRANSFAC yes 12402074
chr7 556636 556641 SP1 TRANSFAC yes 26008571
chr7 556644 556659 ZIC4 JASPAR yes 12402075
chr7 556644 556659 ZIC4 JASPAR yes 26008572
chr7 556645 556659 ZIC1 JASPAR yes 12402076
chr7 556645 556659 ZIC1 JASPAR yes 26008573
chr7 556654 556663 THAP1 JASPAR yes 12402077
chr7 556654 556663 THAP1 JASPAR yes 26008574
chr7 556655 556668 TFAP2A JASPAR yes 12402078
chr7 556655 556668 TFAP2C JASPAR yes 12402079
chr7 556655 556668 TFAP2A JASPAR yes 26008575
chr7 556655 556668 TFAP2C JASPAR yes 26008576
chr7 556656 556663 SP1 TRANSFAC yes 12402080
chr7 556656 556663 SP1 TRANSFAC yes 26008577
chr7 556658 556663 SP1 TRANSFAC yes 12402081
chr7 556658 556663 SP1 TRANSFAC yes 26008578
chr7 556664 556675 NRF1 JASPAR yes 12402082
chr7 556664 556675 NRF1 JASPAR yes 26008579
SNP sites on vista54738[chr7:556288-556672]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr7 556415 rs540947544 GC G
EBF1 TFAP2A TFAP2C
9562777
Genes possibly regulated by vista54738[chr7:556288-556672]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr7 536895 559933 - PDGFA ENSG00000197461.9 559933 0.72 1.0 7149 96739
Expression level of Genes
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miRNAs possibly regulated by vista54738[chr7:556288-556672]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results