EnhancerDB
  1. Home
  2. Enhancers
  3. vista54740[chr7:579426-579712]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista54740[chr7:579426-579712]
Back to top
Tissue distribution of vista54740
Back to top
Transcription factor that possibly regulate vista54740[chr7:579426-579712]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr7 579421 579426 ETS2 TRANSFAC yes 12403805
chr7 579421 579426 ETS2 TRANSFAC yes 26008639
chr7 579424 579439 TFAP2A JASPAR yes 12403806
chr7 579424 579439 TFAP2A JASPAR yes 26008640
chr7 579426 579441 TFAP2C JASPAR yes 12403807
chr7 579426 579441 TFAP2C JASPAR yes 26008641
chr7 579427 579438 TFAP2A JASPAR yes 12403808
chr7 579427 579438 TFAP2B JASPAR yes 12403809
chr7 579427 579438 TFAP2C JASPAR yes 12403810
chr7 579427 579438 TFAP2A JASPAR yes 26008642
chr7 579427 579438 TFAP2B JASPAR yes 26008643
chr7 579427 579438 TFAP2C JASPAR yes 26008644
chr7 579428 579437 TFAP2A JASPAR yes 12403811
chr7 579428 579437 TFAP2A JASPAR yes 26008645
chr7 579432 579437 SP1 TRANSFAC yes 12403812
chr7 579432 579437 SP1 TRANSFAC yes 26008646
chr7 579438 579449 NFKB1 JASPAR yes 12403813
chr7 579438 579449 NFKB1 JASPAR yes 26008647
chr7 579446 579466 RREB1 JASPAR yes 12403814
chr7 579446 579466 RREB1 JASPAR yes 26008648
chr7 579449 579461 ZBTB7C JASPAR yes 12403815
chr7 579449 579461 ZBTB7C JASPAR yes 26008649
chr7 579457 579471 ZIC1 JASPAR yes 12403816
chr7 579457 579471 ZIC1 JASPAR yes 26008650
chr7 579468 579483 ZIC4 JASPAR yes 12403817
chr7 579468 579483 ZIC4 JASPAR yes 26008651
chr7 579470 579475 SP1 TRANSFAC yes 12403818
chr7 579470 579475 SP1 TRANSFAC yes 26008652
chr7 579485 579503 ESR1 JASPAR yes 12403819
chr7 579485 579503 ESR1 JASPAR yes 26008653
chr7 579493 579501 TBX5 JASPAR yes 12403820
chr7 579493 579501 TBX5 JASPAR yes 26008654
chr7 579523 579528 SP1 TRANSFAC yes 12403821
chr7 579523 579528 SP1 TRANSFAC yes 26008655
chr7 579541 579551 ZNF740 JASPAR yes 12403822
chr7 579541 579551 ZNF740 JASPAR yes 26008656
chr7 579543 579553 ZNF740 JASPAR yes 12403823
chr7 579543 579553 ZNF740 JASPAR yes 26008657
chr7 579545 579558 NFKB1 JASPAR yes 12403824
chr7 579545 579558 NFKB2 JASPAR yes 12403825
chr7 579545 579558 NFKB1 JASPAR yes 26008658
chr7 579545 579558 NFKB2 JASPAR yes 26008659
chr7 579546 579557 NFKB1 JASPAR yes 12403826
chr7 579546 579557 NFKB1 JASPAR yes 26008660
chr7 579547 579557 NFKB1 JASPAR yes 12403827
chr7 579547 579557 NFKB1 JASPAR yes 26008661
chr7 579568 579575 SP1 TRANSFAC yes 12403828
chr7 579568 579575 SP1 TRANSFAC yes 26008662
chr7 579570 579575 SP1 TRANSFAC yes 12403829
chr7 579570 579575 SP1 TRANSFAC yes 26008663
chr7 579581 579600 REST JASPAR yes 12403830
chr7 579581 579600 REST JASPAR yes 26008664
chr7 579583 579603 TP53 JASPAR yes 12403831
chr7 579583 579603 TP53 JASPAR yes 26008665
chr7 579589 579603 TLX1 JASPAR yes 12403832
chr7 579589 579603 TLX1 JASPAR yes 26008666
chr7 579604 579616 ZBTB7C JASPAR yes 12403833
chr7 579604 579616 ZBTB7C JASPAR yes 26008667
chr7 579618 579632 FOXF2 JASPAR yes 12403834
chr7 579618 579632 FOXF2 JASPAR yes 26008668
chr7 579619 579631 SRF JASPAR yes 12403835
chr7 579619 579631 SRF JASPAR yes 26008669
chr7 579620 579630 HOXA13 JASPAR yes 12403836
chr7 579620 579630 HOXB13 JASPAR yes 12403837
chr7 579620 579630 HOXD13 JASPAR yes 12403838
chr7 579620 579630 HOXA13 JASPAR yes 26008670
chr7 579620 579630 HOXB13 JASPAR yes 26008671
chr7 579620 579630 HOXD13 JASPAR yes 26008672
chr7 579629 579649 PPARG JASPAR yes 12403839
chr7 579629 579649 PPARG JASPAR yes 26008673
chr7 579635 579646 HOXA10 JASPAR yes 12403840
chr7 579635 579646 HOXA10 JASPAR yes 26008674
chr7 579636 579645 CDX1 JASPAR yes 12403841
chr7 579636 579645 CDX1 JASPAR yes 26008675
chr7 579636 579647 CDX2 JASPAR yes 12403842
chr7 579636 579647 CDX2 JASPAR yes 26008676
chr7 579640 579654 TLX1 JASPAR yes 12403843
chr7 579640 579654 TLX1 JASPAR yes 26008677
chr7 579641 579656 RFX5 JASPAR yes 12403844
chr7 579641 579656 RFX5 JASPAR yes 26008678
chr7 579648 579656 MEIS3 JASPAR yes 12403845
chr7 579648 579656 MEIS3 JASPAR yes 26008679
chr7 579663 579668 SP1 TRANSFAC yes 12403846
chr7 579663 579668 SP1 TRANSFAC yes 26008680
chr7 579665 579685 TP53 JASPAR yes 12403847
chr7 579665 579685 TP53 JASPAR yes 26008681
chr7 579667 579671 LFA1 TRANSFAC yes 12403848
chr7 579667 579671 LFA1 TRANSFAC yes 26008682
chr7 579667 579687 TP63 JASPAR yes 12403849
chr7 579667 579687 TP63 JASPAR yes 26008683
chr7 579668 579686 TP53 JASPAR yes 12403850
chr7 579668 579686 TP53 JASPAR yes 26008684
chr7 579669 579684 TP53 JASPAR yes 12403851
chr7 579669 579684 TP53 JASPAR yes 26008685
chr7 579698 579709 ESRRA JASPAR yes 12403852
chr7 579698 579709 ESRRA JASPAR yes 26008686
chr7 579707 579722 HSF1 JASPAR yes 12403853
chr7 579707 579722 HSF1 JASPAR yes 26008687
SNP sites on vista54740[chr7:579426-579712]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr7 579473 rs35934580 G A
SP1 ZIC4
9563118
chr7 579516 rs62431396 G A no 9563119
chr7 579532 rs144290237 G A no 9563120
chr7 579556 rs558246512 C A
NFKB1 NFKB2
9563121
chr7 579559 rs190027871 G A no 9563122
chr7 579570 rs577266058 C A
SP1
9563123
chr7 579602 rs534458563 C T
TLX1 TP53
9563124
chr7 579684 rs528553904 G C
TP53 TP63
9563125
Genes possibly regulated by vista54740[chr7:579426-579712]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr7 536895 559933 - PDGFA ENSG00000197461.9 559933 0.72 1.0 7149 80507
Expression level of Genes
Back to top
miRNAs possibly regulated by vista54740[chr7:579426-579712]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results