EnhancerDB
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  3. vista54746[chr7:652642-652893]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista54746[chr7:652642-652893]
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Tissue distribution of vista54746
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Transcription factor that possibly regulate vista54746[chr7:652642-652893]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr7 652650 652653 MYB TRANSFAC yes 12411345
chr7 652650 652653 MYB TRANSFAC yes 26009097
chr7 652653 652658 MYC TRANSFAC yes 12411346
chr7 652653 652658 MYC TRANSFAC yes 26009098
chr7 652655 652667 GLI2 JASPAR yes 12411347
chr7 652655 652667 GLI2 JASPAR yes 26009099
chr7 652661 652665 ESR1 TRANSFAC yes 12411348
chr7 652661 652665 ESR1 TRANSFAC yes 26009100
chr7 652661 652671 MEOX2 JASPAR yes 12411349
chr7 652661 652671 MNX1 JASPAR yes 12411350
chr7 652661 652671 MEOX2 JASPAR yes 26009101
chr7 652661 652671 MNX1 JASPAR yes 26009102
chr7 652661 652672 HOXA10 JASPAR yes 12411351
chr7 652661 652672 HOXC11 JASPAR yes 12411352
chr7 652661 652672 HOXC12 JASPAR yes 12411353
chr7 652661 652672 HOXD12 JASPAR yes 12411354
chr7 652661 652672 HOXA10 JASPAR yes 26009103
chr7 652661 652672 HOXC11 JASPAR yes 26009104
chr7 652661 652672 HOXC12 JASPAR yes 26009105
chr7 652661 652672 HOXD12 JASPAR yes 26009106
chr7 652662 652670 NKX6-1 JASPAR yes 12411355
chr7 652662 652670 NKX6-1 JASPAR yes 26009107
chr7 652662 652672 HOXC10 JASPAR yes 12411356
chr7 652662 652672 HOXD11 JASPAR yes 12411357
chr7 652662 652672 HOXC10 JASPAR yes 26009108
chr7 652662 652672 HOXD11 JASPAR yes 26009109
chr7 652662 652678 POU4F2 JASPAR yes 12411358
chr7 652662 652678 POU4F2 JASPAR yes 26009110
chr7 652664 652668 YY1 TRANSFAC yes 12411359
chr7 652664 652668 YY1 TRANSFAC yes 26009111
chr7 652668 652680 YY1 JASPAR yes 12411360
chr7 652668 652680 YY1 JASPAR yes 26009112
chr7 652668 652683 SOX21 JASPAR yes 12411361
chr7 652668 652683 SOX21 JASPAR yes 26009113
chr7 652675 652693 TP73 JASPAR yes 12411362
chr7 652675 652693 TP73 JASPAR yes 26009114
chr7 652680 652691 DMRT3 JASPAR yes 12411363
chr7 652680 652691 DMRT3 JASPAR yes 26009115
chr7 652687 652698 DMRT3 JASPAR yes 12411364
chr7 652687 652698 DMRT3 JASPAR yes 26009116
chr7 652691 652694 MYB TRANSFAC yes 12411365
chr7 652691 652694 MYB TRANSFAC yes 26009117
chr7 652695 652700 ETS2 TRANSFAC yes 12411366
chr7 652695 652700 ETS2 TRANSFAC yes 26009118
chr7 652714 652729 RFX5 JASPAR yes 12411367
chr7 652714 652729 RFX5 JASPAR yes 26009119
chr7 652743 652759 SOX8 JASPAR yes 12411368
chr7 652743 652759 SOX8 JASPAR yes 26009120
chr7 652753 652768 FOXP1 JASPAR yes 12411369
chr7 652753 652768 FOXP1 JASPAR yes 26009121
chr7 652760 652766 HiNF-A TRANSFAC yes 12411370
chr7 652760 652766 HiNF-A TRANSFAC yes 26009122
chr7 652765 652776 CDX2 JASPAR yes 12411371
chr7 652765 652776 CDX2 JASPAR yes 26009123
chr7 652771 652782 FOXA1 JASPAR yes 12411372
chr7 652771 652782 FOXA1 JASPAR yes 26009124
chr7 652771 652786 FOXA1 JASPAR yes 12411373
chr7 652771 652786 FOXA1 JASPAR yes 26009125
chr7 652772 652783 FOXB1 JASPAR yes 12411374
chr7 652772 652783 FOXC1 JASPAR yes 12411375
chr7 652772 652783 FOXB1 JASPAR yes 26009126
chr7 652772 652783 FOXC1 JASPAR yes 26009127
chr7 652772 652784 FOXC2 JASPAR yes 12411376
chr7 652772 652784 FOXC2 JASPAR yes 26009128
chr7 652780 652783 MYB TRANSFAC yes 12411377
chr7 652780 652783 MYB TRANSFAC yes 26009129
chr7 652796 652801 MYC TRANSFAC yes 12411378
chr7 652796 652801 MYC TRANSFAC yes 26009130
chr7 652817 652837 RREB1 JASPAR yes 12411379
chr7 652817 652837 RREB1 JASPAR yes 26009131
chr7 652819 652840 ZNF263 JASPAR yes 12411380
chr7 652819 652840 ZNF263 JASPAR yes 26009132
chr7 652825 652835 SP1 JASPAR yes 12411381
chr7 652825 652835 SP1 JASPAR yes 26009133
chr7 652825 652845 RREB1 JASPAR yes 12411382
chr7 652825 652845 RREB1 JASPAR yes 26009134
chr7 652826 652846 RREB1 JASPAR yes 12411383
chr7 652826 652846 RREB1 JASPAR yes 26009135
chr7 652827 652847 RREB1 JASPAR yes 12411384
chr7 652827 652847 RREB1 JASPAR yes 26009136
chr7 652828 652838 ZNF740 JASPAR yes 12411385
chr7 652828 652838 ZNF740 JASPAR yes 26009137
chr7 652830 652840 SP1 JASPAR yes 12411386
chr7 652830 652840 SP1 JASPAR yes 26009138
chr7 652831 652841 SP1 JASPAR yes 12411387
chr7 652831 652841 SP1 JASPAR yes 26009139
chr7 652832 652849 RARA JASPAR yes 12411388
chr7 652832 652849 RXRA JASPAR yes 12411389
chr7 652832 652849 RARA JASPAR yes 26009140
chr7 652832 652849 RXRA JASPAR yes 26009141
chr7 652833 652838 SP1 TRANSFAC yes 12411390
chr7 652833 652838 SP1 TRANSFAC yes 26009142
chr7 652837 652849 INSM1 JASPAR yes 12411391
chr7 652837 652849 INSM1 JASPAR yes 26009143
chr7 652844 652848 ESR1 TRANSFAC yes 12411392
chr7 652844 652848 ESR1 TRANSFAC yes 26009144
chr7 652845 652858 POU2F2 JASPAR yes 12411393
chr7 652845 652858 POU2F2 JASPAR yes 26009145
chr7 652847 652851 YY1 TRANSFAC yes 12411394
chr7 652847 652851 YY1 TRANSFAC yes 26009146
chr7 652854 652869 FOXP1 JASPAR yes 12411395
chr7 652854 652869 FOXP1 JASPAR yes 26009147
chr7 652855 652866 FOXP2 JASPAR yes 12411396
chr7 652855 652866 FOXP2 JASPAR yes 26009148
chr7 652855 652876 IRF1 JASPAR yes 12411397
chr7 652855 652876 IRF1 JASPAR yes 26009149
chr7 652857 652872 FOXP1 JASPAR yes 12411398
chr7 652857 652872 FOXP1 JASPAR yes 26009150
chr7 652857 652878 IRF1 JASPAR yes 12411399
chr7 652857 652878 IRF1 JASPAR yes 26009151
chr7 652861 652875 IRF7 JASPAR yes 12411400
chr7 652861 652875 IRF7 JASPAR yes 26009152
chr7 652861 652882 IRF1 JASPAR yes 12411401
chr7 652861 652882 IRF1 JASPAR yes 26009153
chr7 652862 652877 FOXP1 JASPAR yes 12411402
chr7 652862 652877 FOXP1 JASPAR yes 26009154
chr7 652867 652888 IRF1 JASPAR yes 12411403
chr7 652867 652888 IRF1 JASPAR yes 26009155
chr7 652869 652884 STAT2 JASPAR yes 12411404
chr7 652869 652884 STAT2 JASPAR yes 26009156
chr7 652871 652883 IRF1 JASPAR yes 12411405
chr7 652871 652883 IRF1 JASPAR yes 26009157
chr7 652872 652893 IRF1 JASPAR yes 12411406
chr7 652872 652893 IRF1 JASPAR yes 26009158
chr7 652873 652879 TCF4 TRANSFAC yes 12411407
chr7 652873 652879 TCF4 TRANSFAC yes 26009159
chr7 652873 652888 FOXP1 JASPAR yes 12411408
chr7 652873 652888 FOXP1 JASPAR yes 26009160
chr7 652874 652885 FOXP2 JASPAR yes 12411409
chr7 652874 652885 FOXP2 JASPAR yes 26009161
chr7 652874 652886 FOXC2 JASPAR yes 12411410
chr7 652874 652886 FOXC2 JASPAR yes 26009162
chr7 652874 652889 STAT2 JASPAR yes 12411411
chr7 652874 652889 STAT2 JASPAR yes 26009163
chr7 652875 652890 FOXP1 JASPAR yes 12411412
chr7 652875 652890 FOXP1 JASPAR yes 26009164
chr7 652877 652892 FOXP1 JASPAR yes 12411413
chr7 652877 652892 FOXP1 JASPAR yes 26009165
chr7 652878 652893 FOXP1 JASPAR yes 12411414
chr7 652878 652893 FOXP1 JASPAR yes 26009166
chr7 652879 652894 FOXP1 JASPAR yes 12411415
chr7 652879 652894 FOXP1 JASPAR yes 26009167
chr7 652885 652899 ONECUT2 JASPAR yes 12411416
chr7 652885 652899 ONECUT3 JASPAR yes 12411417
chr7 652885 652899 ONECUT2 JASPAR yes 26009168
chr7 652885 652899 ONECUT3 JASPAR yes 26009169
chr7 652888 652898 MEOX2 JASPAR yes 12411418
chr7 652888 652898 MEOX2 JASPAR yes 26009170
SNP sites on vista54746[chr7:652642-652893]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr7 652659 rs62431455 T C
GLI2
9564221
chr7 652660 rs149928046 G A
GLI2
9564222
chr7 652741 rs62431456 G A no 9564223
chr7 652783 rs552141857 AC A
FOXA1 FOXB1 FOXC1 FOXC2 MYB
9564224
chr7 652807 rs529347489 C G no 9564225
chr7 652838 rs62431457 G A
INSM1 RARA RREB1 RXRA SP1 ZNF263 ZNF740
9564226
chr7 652878 rs200434662 G GT
FOXC2 FOXP1 FOXP2 IRF1 STAT2 TCF4
9564227
chr7 652887 rs551658028 T C
FOXP1 IRF1 ONECUT2 ONECUT3 STAT2
9564228
Genes possibly regulated by vista54746[chr7:652642-652893]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr7 536895 559933 - PDGFA ENSG00000197461.9 559933 0.72 1.0 7149 7291
Expression level of Genes
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miRNAs possibly regulated by vista54746[chr7:652642-652893]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results