EnhancerDB
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  3. vista54748[chr7:657520-657797]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista54748[chr7:657520-657797]
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Tissue distribution of vista54748
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Transcription factor that possibly regulate vista54748[chr7:657520-657797]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr7 657659 658019 POLR2A UCSC Txn Factor no Conserved 108542903
chr7 657515 657525 MZF1 JASPAR yes 12412199
chr7 657515 657525 MZF1 JASPAR yes 26009265
chr7 657524 657534 SMAD3 JASPAR yes 12412200
chr7 657524 657534 SMAD3 JASPAR yes 26009266
chr7 657533 657541 SP1 TRANSFAC yes 12412201
chr7 657533 657541 SP1 TRANSFAC yes 26009267
chr7 657533 657543 SP1 JASPAR yes 12412202
chr7 657533 657543 SP1 JASPAR yes 26009268
chr7 657534 657540 SP1 TRANSFAC yes 12412203
chr7 657534 657540 SP1 TRANSFAC yes 26009269
chr7 657534 657544 SP1 JASPAR yes 12412204
chr7 657534 657544 SP1 JASPAR yes 26009270
chr7 657535 657542 SP1 TRANSFAC yes 12412205
chr7 657535 657542 SP1 TRANSFAC yes 26009271
chr7 657536 657541 SP1 TRANSFAC yes 12412206
chr7 657536 657541 SP1 TRANSFAC yes 26009272
chr7 657536 657542 SP1 TRANSFAC yes 12412207
chr7 657536 657542 SP1 TRANSFAC yes 26009273
chr7 657562 657568 MYC TRANSFAC yes 12412208
chr7 657562 657568 MYC TRANSFAC yes 26009274
chr7 657569 657575 HiNF-A TRANSFAC yes 12412209
chr7 657569 657575 HiNF-A TRANSFAC yes 26009275
chr7 657583 657601 IRF2 JASPAR yes 12412210
chr7 657583 657601 IRF2 JASPAR yes 26009276
chr7 657598 657604 MZF1 JASPAR yes 12412211
chr7 657598 657604 MZF1 JASPAR yes 26009277
chr7 657610 657625 TFAP2C JASPAR yes 12412212
chr7 657610 657625 TFAP2C JASPAR yes 26009278
chr7 657613 657624 EBF1 JASPAR yes 12412213
chr7 657613 657624 EBF1 JASPAR yes 26009279
chr7 657620 657625 ETS2 TRANSFAC yes 12412214
chr7 657620 657625 ETS2 TRANSFAC yes 26009280
chr7 657628 657646 ESR1 JASPAR yes 12412215
chr7 657628 657646 ESR1 JASPAR yes 26009281
chr7 657632 657642 SP1 JASPAR yes 12412216
chr7 657632 657642 SP1 JASPAR yes 26009282
chr7 657635 657656 ZNF263 JASPAR yes 12412217
chr7 657635 657656 ZNF263 JASPAR yes 26009283
chr7 657638 657653 PRDM1 JASPAR yes 12412218
chr7 657638 657653 PRDM1 JASPAR yes 26009284
chr7 657666 657680 PLAG1 JASPAR yes 12412219
chr7 657666 657680 PLAG1 JASPAR yes 26009285
chr7 657666 657686 RREB1 JASPAR yes 12412220
chr7 657666 657686 RREB1 JASPAR yes 26009286
chr7 657670 657680 SP1 JASPAR yes 12412221
chr7 657670 657680 SP1 JASPAR yes 26009287
chr7 657672 657692 RREB1 JASPAR yes 12412222
chr7 657672 657692 RREB1 JASPAR yes 26009288
chr7 657673 657678 SP1 TRANSFAC yes 12412223
chr7 657673 657678 SP1 TRANSFAC yes 26009289
chr7 657673 657679 SP1 TRANSFAC yes 12412224
chr7 657673 657679 SP1 TRANSFAC yes 26009290
chr7 657673 657680 SP1 TRANSFAC yes 12412225
chr7 657673 657680 SP1 TRANSFAC yes 26009291
chr7 657676 657696 RREB1 JASPAR yes 12412226
chr7 657676 657696 RREB1 JASPAR yes 26009292
chr7 657682 657701 REST JASPAR yes 12412227
chr7 657682 657701 REST JASPAR yes 26009293
chr7 657708 657714 MZF1 JASPAR yes 12412228
chr7 657708 657714 MZF1 JASPAR yes 26009294
chr7 657730 657751 ZNF263 JASPAR yes 12412229
chr7 657730 657751 ZNF263 JASPAR yes 26009295
chr7 657734 657755 ZNF263 JASPAR yes 12412230
chr7 657734 657755 ZNF263 JASPAR yes 26009296
chr7 657736 657747 E2F6 JASPAR yes 12412231
chr7 657736 657747 E2F6 JASPAR yes 26009297
chr7 657736 657750 PLAG1 JASPAR yes 12412232
chr7 657736 657750 PLAG1 JASPAR yes 26009298
chr7 657737 657742 SP1 TRANSFAC yes 12412233
chr7 657737 657742 SP1 TRANSFAC yes 26009299
chr7 657749 657759 SP1 JASPAR yes 12412234
chr7 657749 657759 SP1 JASPAR yes 26009300
chr7 657753 657768 HNF4G JASPAR yes 12412235
chr7 657753 657768 NR2C2 JASPAR yes 12412236
chr7 657753 657768 HNF4G JASPAR yes 26009301
chr7 657753 657768 NR2C2 JASPAR yes 26009302
chr7 657754 657768 NR2F1 JASPAR yes 12412237
chr7 657754 657768 NR2F1 JASPAR yes 26009303
chr7 657754 657769 HNF4A JASPAR yes 12412238
chr7 657754 657769 HNF4A JASPAR yes 26009304
chr7 657756 657760 LFA1 TRANSFAC yes 12412239
chr7 657756 657760 LFA1 TRANSFAC yes 26009305
chr7 657762 657766 H4TF2 TRANSFAC yes 12412240
chr7 657762 657766 H4TF2 TRANSFAC yes 26009306
chr7 657789 657794 GATA2 JASPAR yes 12412241
chr7 657789 657794 GATA2 JASPAR yes 26009307
SNP sites on vista54748[chr7:657520-657797]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr7 657615 rs71518324 C G
EBF1 TFAP2C
9564311
chr7 657644 rs141617779 T C
ESR1 PRDM1 ZNF263
9564312
chr7 657719 rs66741454 T C
POLR2A
9564313
chr7 657720 rs533140120 G A,T
POLR2A
9564314
chr7 657778 rs182273784 C T
POLR2A
9564315
Genes possibly regulated by vista54748[chr7:657520-657797]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr7 536895 559933 - PDGFA ENSG00000197461.9 559933 0.72 1.0 7149 2413
Expression level of Genes
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miRNAs possibly regulated by vista54748[chr7:657520-657797]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results