EnhancerDB
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  3. vista5476[chr1:229690998-229691240]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5476[chr1:229690998-229691240]
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Tissue distribution of vista5476
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Transcription factor that possibly regulate vista5476[chr1:229690998-229691240]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 229690540 229691120 ZNF263 UCSC Txn Factor no Conserved 107878166
chr1 229690638 229691288 TAL1 UCSC Txn Factor no Conserved 107878171
chr1 229690643 229691319 TEAD4 UCSC Txn Factor no Conserved 107878173
chr1 229690734 229691402 POLR2A UCSC Txn Factor no Conserved 107878176
chr1 229690811 229691300 ZNF274 UCSC Txn Factor no Conserved 107878182
chr1 229690847 229691203 RCOR1 UCSC Txn Factor no Conserved 107878187
chr1 229690854 229691278 PML UCSC Txn Factor no Conserved 107878189
chr1 229690856 229691216 NR2F2 UCSC Txn Factor no Conserved 107878191
chr1 229690882 229691266 EP300 UCSC Txn Factor no Conserved 107878202
chr1 229690899 229691498 GATA2 UCSC Txn Factor no Conserved 107878207
chr1 229690916 229691203 GABPA UCSC Txn Factor no Conserved 107878211
chr1 229690917 229691196 STAT5A UCSC Txn Factor no Conserved 107878213
chr1 229690933 229691200 TRIM28 UCSC Txn Factor no Conserved 107878218
chr1 229691003 229691327 CEBPB UCSC Txn Factor no Conserved 107878231
chr1 229690993 229690998 GATA1 TRANSFAC yes 35990024
chr1 229690993 229690998 GATA1 TRANSFAC yes 118476826
chr1 229690993 229690999 GATA3 JASPAR yes 35990025
chr1 229690993 229690999 GATA3 JASPAR yes 118476827
chr1 229691021 229691035 CREB3 JASPAR yes 35990026
chr1 229691021 229691035 CREB3 JASPAR yes 118476828
chr1 229691036 229691041 GATA2 JASPAR yes 35990027
chr1 229691036 229691041 GATA2 JASPAR yes 118476829
chr1 229691040 229691052 PBX1 JASPAR yes 35990028
chr1 229691040 229691052 PBX1 JASPAR yes 118476830
chr1 229691042 229691053 FOXH1 JASPAR yes 35990029
chr1 229691042 229691053 FOXH1 JASPAR yes 118476831
chr1 229691044 229691065 ZNF263 JASPAR yes 35990030
chr1 229691044 229691065 ZNF263 JASPAR yes 118476832
chr1 229691046 229691052 ZNF354C JASPAR yes 35990031
chr1 229691046 229691052 ZNF354C JASPAR yes 118476833
chr1 229691047 229691068 ZNF263 JASPAR yes 35990032
chr1 229691047 229691068 ZNF263 JASPAR yes 118476834
chr1 229691059 229691080 ZNF263 JASPAR yes 35990033
chr1 229691059 229691080 ZNF263 JASPAR yes 118476835
chr1 229691068 229691078 ID4 JASPAR yes 35990034
chr1 229691068 229691078 TCF3 JASPAR yes 35990035
chr1 229691068 229691078 TCF4 JASPAR yes 35990036
chr1 229691068 229691078 ID4 JASPAR yes 118476836
chr1 229691068 229691078 TCF3 JASPAR yes 118476837
chr1 229691068 229691078 TCF4 JASPAR yes 118476838
chr1 229691069 229691078 SNAI2 JASPAR yes 35990037
chr1 229691069 229691078 SNAI2 JASPAR yes 118476839
chr1 229691069 229691080 GCM1 JASPAR yes 35990038
chr1 229691069 229691080 GCM1 JASPAR yes 118476840
chr1 229691070 229691075 USF2 TRANSFAC yes 35990039
chr1 229691070 229691075 USF2 TRANSFAC yes 118476841
chr1 229691091 229691103 E2F8 JASPAR yes 35990040
chr1 229691091 229691103 E2F8 JASPAR yes 118476842
chr1 229691138 229691151 ZBTB18 JASPAR yes 35990041
chr1 229691138 229691151 ZBTB18 JASPAR yes 118476843
chr1 229691152 229691164 PKNOX1 JASPAR yes 35990042
chr1 229691152 229691164 PKNOX2 JASPAR yes 35990043
chr1 229691152 229691164 PKNOX1 JASPAR yes 118476844
chr1 229691152 229691164 PKNOX2 JASPAR yes 118476845
chr1 229691153 229691163 NHLH1 JASPAR yes 35990044
chr1 229691153 229691163 NHLH1 JASPAR yes 118476846
chr1 229691169 229691175 MZF1 JASPAR yes 35990045
chr1 229691169 229691175 MZF1 JASPAR yes 118476847
chr1 229691178 229691183 SP1 TRANSFAC yes 35990046
chr1 229691178 229691183 SP1 TRANSFAC yes 118476848
chr1 229691190 229691198 EHF JASPAR yes 35990047
chr1 229691190 229691198 EHF JASPAR yes 118476849
chr1 229691192 229691197 ETS2 TRANSFAC yes 35990048
chr1 229691192 229691197 ETS2 TRANSFAC yes 118476850
chr1 229691201 229691213 TEAD1 JASPAR yes 35990049
chr1 229691201 229691213 TEAD1 JASPAR yes 118476851
chr1 229691202 229691209 SPIB JASPAR yes 35990050
chr1 229691202 229691209 SPIB JASPAR yes 118476852
chr1 229691203 229691213 TEAD1 JASPAR yes 35990051
chr1 229691203 229691213 TEAD4 JASPAR yes 35990052
chr1 229691203 229691213 TEAD1 JASPAR yes 118476853
chr1 229691203 229691213 TEAD4 JASPAR yes 118476854
chr1 229691204 229691212 TEAD3 JASPAR yes 35990053
chr1 229691204 229691212 TEAD3 JASPAR yes 118476855
chr1 229691207 229691218 DMRT3 JASPAR yes 35990054
chr1 229691207 229691218 DMRT3 JASPAR yes 118476856
chr1 229691209 229691229 TBX19 JASPAR yes 35990055
chr1 229691209 229691229 TBX19 JASPAR yes 118476857
chr1 229691211 229691214 MYB TRANSFAC yes 35990056
chr1 229691211 229691214 MYB TRANSFAC yes 118476858
chr1 229691211 229691227 T JASPAR yes 35990057
chr1 229691211 229691227 T JASPAR yes 118476859
chr1 229691218 229691230 POU2F1 JASPAR yes 35990058
chr1 229691218 229691230 POU2F1 JASPAR yes 118476860
chr1 229691219 229691231 POU3F1 JASPAR yes 35990059
chr1 229691219 229691231 POU3F2 JASPAR yes 35990060
chr1 229691219 229691231 POU3F1 JASPAR yes 118476861
chr1 229691219 229691231 POU3F2 JASPAR yes 118476862
chr1 229691220 229691229 POU3F4 JASPAR yes 35990061
chr1 229691220 229691229 POU5F1B JASPAR yes 35990062
chr1 229691220 229691229 POU3F4 JASPAR yes 118476863
chr1 229691220 229691229 POU5F1B JASPAR yes 118476864
chr1 229691237 229691257 TP53 JASPAR yes 35990063
chr1 229691237 229691257 TP53 JASPAR yes 118476865
chr1 229691240 229691258 TP53 JASPAR yes 35990064
chr1 229691240 229691258 TP53 JASPAR yes 118476866
SNP sites on vista5476[chr1:229690998-229691240]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 229691084 rs148555584 T TA
CEBPB EP300 GABPA GATA2 NR2F2 PML POLR2A RCOR1 STAT5A TAL1 TEAD4 TRIM28 ZNF263 ZNF274
1010990
Genes possibly regulated by vista5476[chr1:229690998-229691240]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 229577045 229644103 - NUP133 ENSG00000069248.9 229644103 0.58 0.99 1933 53105
chr1 229652329 229694442 - ABCB10 ENSG00000135776.4 229694442 0.62 0.98 1934 96798
chr1 229728858 229761794 - TAF5L ENSG00000135801.5 229761794 0.7 0.99 1935 29446
chr1 229761981 229795946 + URB2 ENSG00000135763.5 229761981 0.74 0.99 1936 29259
Expression level of Genes
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miRNAs possibly regulated by vista5476[chr1:229690998-229691240]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results