EnhancerDB
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  3. vista54765[chr7:1039490-1039728]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista54765[chr7:1039490-1039728]
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Tissue distribution of vista54765
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Transcription factor that possibly regulate vista54765[chr7:1039490-1039728]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr7 1039499 1039504 SP1 TRANSFAC yes 12437754
chr7 1039499 1039504 SP1 TRANSFAC yes 26009980
chr7 1039529 1039533 NFE TRANSFAC yes 12437755
chr7 1039529 1039533 NFE TRANSFAC yes 26009981
chr7 1039552 1039573 ZNF263 JASPAR yes 12437756
chr7 1039552 1039573 ZNF263 JASPAR yes 26009982
chr7 1039554 1039558 NFE TRANSFAC yes 12437757
chr7 1039554 1039558 NFE TRANSFAC yes 26009983
chr7 1039554 1039559 GATA1 TRANSFAC yes 12437758
chr7 1039554 1039559 GATA1 TRANSFAC yes 26009984
chr7 1039554 1039560 GATA3 JASPAR yes 12437759
chr7 1039554 1039560 GATA3 JASPAR yes 26009985
chr7 1039559 1039570 FLI1 JASPAR yes 12437760
chr7 1039559 1039570 FLI1 JASPAR yes 26009986
chr7 1039566 1039572 NFE2 TRANSFAC yes 12437761
chr7 1039566 1039572 NFE2 TRANSFAC yes 26009987
chr7 1039566 1039578 INSM1 JASPAR yes 12437762
chr7 1039566 1039578 INSM1 JASPAR yes 26009988
chr7 1039579 1039583 LFA1 TRANSFAC yes 12437763
chr7 1039579 1039583 LFA1 TRANSFAC yes 26009989
chr7 1039580 1039590 NHLH1 JASPAR yes 12437764
chr7 1039580 1039590 NHLH1 JASPAR yes 26009990
chr7 1039585 1039594 THAP1 JASPAR yes 12437765
chr7 1039585 1039594 THAP1 JASPAR yes 26009991
chr7 1039589 1039605 T JASPAR yes 12437766
chr7 1039589 1039605 T JASPAR yes 26009992
chr7 1039596 1039614 TP73 JASPAR yes 12437767
chr7 1039596 1039614 TP73 JASPAR yes 26009993
chr7 1039600 1039610 SMAD3 JASPAR yes 12437768
chr7 1039600 1039610 SMAD3 JASPAR yes 26009994
chr7 1039607 1039627 RREB1 JASPAR yes 12437769
chr7 1039607 1039627 RREB1 JASPAR yes 26009995
chr7 1039623 1039633 CLOCK JASPAR yes 12437770
chr7 1039623 1039633 HEY1 JASPAR yes 12437771
chr7 1039623 1039633 CLOCK JASPAR yes 26009996
chr7 1039623 1039633 HEY1 JASPAR yes 26009997
chr7 1039625 1039630 MYC TRANSFAC yes 12437772
chr7 1039625 1039630 USF1 TRANSFAC yes 12437773
chr7 1039625 1039630 USF2 TRANSFAC yes 12437774
chr7 1039625 1039630 MYC TRANSFAC yes 26009998
chr7 1039625 1039630 USF1 TRANSFAC yes 26009999
chr7 1039625 1039630 USF2 TRANSFAC yes 26010000
chr7 1039625 1039643 TP63 JASPAR yes 12437775
chr7 1039625 1039643 TP73 JASPAR yes 12437776
chr7 1039625 1039643 TP63 JASPAR yes 26010001
chr7 1039625 1039643 TP73 JASPAR yes 26010002
chr7 1039627 1039637 SMAD3 JASPAR yes 12437777
chr7 1039627 1039637 SMAD3 JASPAR yes 26010003
chr7 1039632 1039644 PKNOX1 JASPAR yes 12437778
chr7 1039632 1039644 PKNOX2 JASPAR yes 12437779
chr7 1039632 1039644 TGIF1 JASPAR yes 12437780
chr7 1039632 1039644 TGIF2 JASPAR yes 12437781
chr7 1039632 1039644 PKNOX1 JASPAR yes 26010004
chr7 1039632 1039644 PKNOX2 JASPAR yes 26010005
chr7 1039632 1039644 TGIF1 JASPAR yes 26010006
chr7 1039632 1039644 TGIF2 JASPAR yes 26010007
chr7 1039632 1039646 XBP1 JASPAR yes 12437782
chr7 1039632 1039646 XBP1 JASPAR yes 26010008
chr7 1039637 1039649 CREB1 JASPAR yes 12437783
chr7 1039637 1039649 CREB1 JASPAR yes 26010009
chr7 1039638 1039643 ATF1 TRANSFAC yes 12437784
chr7 1039638 1039643 ATF1 TRANSFAC yes 26010010
chr7 1039652 1039662 CLOCK JASPAR yes 12437785
chr7 1039652 1039662 HEY1 JASPAR yes 12437786
chr7 1039652 1039662 HEY2 JASPAR yes 12437787
chr7 1039652 1039662 CLOCK JASPAR yes 26010011
chr7 1039652 1039662 HEY1 JASPAR yes 26010012
chr7 1039652 1039662 HEY2 JASPAR yes 26010013
chr7 1039654 1039659 MYC TRANSFAC yes 12437788
chr7 1039654 1039659 USF1 TRANSFAC yes 12437789
chr7 1039654 1039659 USF2 TRANSFAC yes 12437790
chr7 1039654 1039659 MYC TRANSFAC yes 26010014
chr7 1039654 1039659 USF1 TRANSFAC yes 26010015
chr7 1039654 1039659 USF2 TRANSFAC yes 26010016
chr7 1039654 1039672 TP63 JASPAR yes 12437791
chr7 1039654 1039672 TP73 JASPAR yes 12437792
chr7 1039654 1039672 TP63 JASPAR yes 26010017
chr7 1039654 1039672 TP73 JASPAR yes 26010018
chr7 1039656 1039666 SMAD3 JASPAR yes 12437793
chr7 1039656 1039666 SMAD3 JASPAR yes 26010019
chr7 1039661 1039673 PKNOX1 JASPAR yes 12437794
chr7 1039661 1039673 PKNOX2 JASPAR yes 12437795
chr7 1039661 1039673 TGIF1 JASPAR yes 12437796
chr7 1039661 1039673 TGIF2 JASPAR yes 12437797
chr7 1039661 1039673 PKNOX1 JASPAR yes 26010020
chr7 1039661 1039673 PKNOX2 JASPAR yes 26010021
chr7 1039661 1039673 TGIF1 JASPAR yes 26010022
chr7 1039661 1039673 TGIF2 JASPAR yes 26010023
chr7 1039661 1039675 XBP1 JASPAR yes 12437798
chr7 1039661 1039675 XBP1 JASPAR yes 26010024
chr7 1039663 1039683 RREB1 JASPAR yes 12437799
chr7 1039663 1039683 RREB1 JASPAR yes 26010025
chr7 1039667 1039672 ATF1 TRANSFAC yes 12437800
chr7 1039667 1039672 ATF1 TRANSFAC yes 26010026
chr7 1039677 1039687 BHLHE40 JASPAR yes 12437801
chr7 1039677 1039687 CLOCK JASPAR yes 12437802
chr7 1039677 1039687 HEY1 JASPAR yes 12437803
chr7 1039677 1039687 MAX JASPAR yes 12437804
chr7 1039677 1039687 MNT JASPAR yes 12437805
chr7 1039677 1039687 BHLHE40 JASPAR yes 26010027
chr7 1039677 1039687 CLOCK JASPAR yes 26010028
chr7 1039677 1039687 HEY1 JASPAR yes 26010029
chr7 1039677 1039687 MAX JASPAR yes 26010030
chr7 1039677 1039687 MNT JASPAR yes 26010031
chr7 1039679 1039684 MYC TRANSFAC yes 12437806
chr7 1039679 1039684 USF1 TRANSFAC yes 12437807
chr7 1039679 1039684 USF2 TRANSFAC yes 12437808
chr7 1039679 1039684 MYC TRANSFAC yes 26010032
chr7 1039679 1039684 USF1 TRANSFAC yes 26010033
chr7 1039679 1039684 USF2 TRANSFAC yes 26010034
chr7 1039683 1039692 SNAI2 JASPAR yes 12437809
chr7 1039683 1039692 SNAI2 JASPAR yes 26010035
chr7 1039720 1039729 THAP1 JASPAR yes 12437810
chr7 1039720 1039729 THAP1 JASPAR yes 26010036
chr7 1039721 1039734 TFAP2A JASPAR yes 12437811
chr7 1039721 1039734 TFAP2B JASPAR yes 12437812
chr7 1039721 1039734 TFAP2C JASPAR yes 12437813
chr7 1039721 1039734 TFAP2A JASPAR yes 26010037
chr7 1039721 1039734 TFAP2B JASPAR yes 26010038
chr7 1039721 1039734 TFAP2C JASPAR yes 26010039
chr7 1039721 1039736 TFAP2A JASPAR yes 12437814
chr7 1039721 1039736 TFAP2C JASPAR yes 12437815
chr7 1039721 1039736 TFAP2A JASPAR yes 26010040
chr7 1039721 1039736 TFAP2C JASPAR yes 26010041
SNP sites on vista54765[chr7:1039490-1039728]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr7 1039502 rs148471462 G A,T
SP1
9568113
chr7 1039513 rs186536115 G A no 9568114
chr7 1039544 rs367610367 C T no 9568115
chr7 1039577 rs531418000 A G
INSM1
9568116
chr7 1039619 rs142695084 G A
RREB1
9568117
chr7 1039636 rs146044506 C T
PKNOX1 PKNOX2 SMAD3 TGIF1 TGIF2 TP63 TP73 XBP1
9568118
chr7 1039645 rs117024433 T C,G
CREB1 XBP1
9568119
chr7 1039697 rs545249151 C T no 9568120
chr7 1039710 rs115249994 C T no 9568121
Genes possibly regulated by vista54765[chr7:1039490-1039728]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr7 937540 995043 - ADAP1 ENSG00000105963.9 995043 0.8 1.0 7154 55553
chr7 938415 1015235 - COX19 ENSG00000240230.1 1015235 0.62 1.0 7155 75745
chr7 1022835 1029276 + CYP2W1 ENSG00000073067.9 1022835 0.98 0.98 7156 83345
chr7 1084212 1098897 + GPR146 ENSG00000164849.7 1084212 0.77 1.0 7158 55516
chr7 1121844 1133451 + GPER1 ENSG00000164850.10 1121844 0.81 0.97 7159 17884
Expression level of Genes
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miRNAs possibly regulated by vista54765[chr7:1039490-1039728]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr7 1062591 1062613 - hsa-miR-339-3p MIMAT0004702 1068004 0.10383299642357331 0.710973 0.81487 1407
Expression level of miRNAs
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