EnhancerDB
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  3. vista5477[chr1:229692979-229693368]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5477[chr1:229692979-229693368]
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Tissue distribution of vista5477
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Transcription factor that possibly regulate vista5477[chr1:229692979-229693368]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 229692981 229692995 PLAG1 JASPAR yes 35990363
chr1 229692981 229692995 PLAG1 JASPAR yes 118476867
chr1 229692991 229693001 SP1 JASPAR yes 35990364
chr1 229692991 229693001 SP1 JASPAR yes 118476868
chr1 229693005 229693014 SNAI2 JASPAR yes 35990365
chr1 229693005 229693014 SNAI2 JASPAR yes 118476869
chr1 229693005 229693015 ID4 JASPAR yes 35990366
chr1 229693005 229693015 TCF3 JASPAR yes 35990367
chr1 229693005 229693015 TCF4 JASPAR yes 35990368
chr1 229693005 229693015 ID4 JASPAR yes 118476870
chr1 229693005 229693015 TCF3 JASPAR yes 118476871
chr1 229693005 229693015 TCF4 JASPAR yes 118476872
chr1 229693025 229693033 FOXL1 JASPAR yes 35990369
chr1 229693025 229693033 FOXL1 JASPAR yes 118476873
chr1 229693032 229693046 POU4F1 JASPAR yes 35990370
chr1 229693032 229693046 POU4F1 JASPAR yes 118476874
chr1 229693032 229693048 POU4F3 JASPAR yes 35990371
chr1 229693032 229693048 POU4F3 JASPAR yes 118476875
chr1 229693037 229693041 YY1 TRANSFAC yes 35990372
chr1 229693037 229693041 YY1 TRANSFAC yes 118476876
chr1 229693054 229693060 MZF1 JASPAR yes 35990373
chr1 229693054 229693060 MZF1 JASPAR yes 118476877
chr1 229693061 229693064 MYB TRANSFAC yes 35990374
chr1 229693061 229693064 MYB TRANSFAC yes 118476878
chr1 229693096 229693101 ETS2 TRANSFAC yes 35990375
chr1 229693096 229693101 ETS2 TRANSFAC yes 118476879
chr1 229693145 229693157 TAL1 JASPAR yes 35990376
chr1 229693145 229693157 TAL1 JASPAR yes 118476880
chr1 229693145 229693158 ZBTB18 JASPAR yes 35990377
chr1 229693145 229693158 ZBTB18 JASPAR yes 118476881
chr1 229693147 229693157 MYF6 JASPAR yes 35990378
chr1 229693147 229693157 NEUROG2 JASPAR yes 35990379
chr1 229693147 229693157 OLIG1 JASPAR yes 35990380
chr1 229693147 229693157 OLIG3 JASPAR yes 35990381
chr1 229693147 229693157 MYF6 JASPAR yes 118476882
chr1 229693147 229693157 NEUROG2 JASPAR yes 118476883
chr1 229693147 229693157 OLIG1 JASPAR yes 118476884
chr1 229693147 229693157 OLIG3 JASPAR yes 118476885
chr1 229693147 229693159 TAL1 JASPAR yes 35990382
chr1 229693147 229693159 TAL1 JASPAR yes 118476886
chr1 229693150 229693162 FOXI1 JASPAR yes 35990383
chr1 229693150 229693162 FOXI1 JASPAR yes 118476887
chr1 229693152 229693160 FOXG1 JASPAR yes 35990384
chr1 229693152 229693160 FOXG1 JASPAR yes 118476888
chr1 229693177 229693192 IRF9 JASPAR yes 35990385
chr1 229693177 229693192 IRF9 JASPAR yes 118476889
chr1 229693178 229693192 IRF7 JASPAR yes 35990386
chr1 229693178 229693192 ONECUT2 JASPAR yes 35990387
chr1 229693178 229693192 ONECUT3 JASPAR yes 35990388
chr1 229693178 229693192 IRF7 JASPAR yes 118476890
chr1 229693178 229693192 ONECUT2 JASPAR yes 118476891
chr1 229693178 229693192 ONECUT3 JASPAR yes 118476892
chr1 229693180 229693192 IRF1 JASPAR yes 35990389
chr1 229693180 229693192 IRF1 JASPAR yes 118476893
chr1 229693217 229693229 FOXI1 JASPAR yes 118476894
chr1 229693218 229693226 FOXO3 JASPAR yes 118476895
chr1 229693228 229693246 SRF JASPAR yes 118476896
chr1 229693231 229693235 H1TF2 TRANSFAC yes 118476897
chr1 229693231 229693235 NFE TRANSFAC yes 118476898
chr1 229693231 229693235 SRF TRANSFAC yes 118476899
chr1 229693231 229693239 DLX6 JASPAR yes 118476900
chr1 229693231 229693239 MSX2 JASPAR yes 118476901
chr1 229693242 229693248 TBP TRANSFAC yes 118476902
chr1 229693245 229693259 SPI1 JASPAR yes 118476903
chr1 229693266 229693270 NFE TRANSFAC yes 118476904
chr1 229693266 229693280 RORA JASPAR yes 118476905
chr1 229693271 229693281 MEF2A JASPAR yes 118476906
chr1 229693272 229693276 YY1 TRANSFAC yes 118476907
chr1 229693272 229693281 POU5F1B JASPAR yes 118476908
chr1 229693280 229693286 TCF4 TRANSFAC yes 118476909
chr1 229693294 229693308 IRF7 JASPAR yes 118476910
chr1 229693299 229693303 YY1 TRANSFAC yes 118476911
chr1 229693314 229693320 TBP TRANSFAC yes 118476912
chr1 229693320 229693335 HNF1A JASPAR yes 118476913
chr1 229693321 229693331 CEBPG JASPAR yes 118476914
chr1 229693321 229693334 HNF1B JASPAR yes 118476915
chr1 229693322 229693333 PHOX2A JASPAR yes 118476916
chr1 229693328 229693336 HOXA5 JASPAR yes 118476917
SNP sites on vista5477[chr1:229692979-229693368]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 229693078 rs79729359 G A no 1011015
chr1 229693132 rs12734075 T C no 1011016
chr1 229693148 rs182334256 A C
MYF6 NEUROG2 OLIG1 OLIG3 TAL1 ZBTB18
1011017
chr1 229693232 rs573545383 C T
DLX6 H1TF2 MSX2 NFE SRF
1011018
Genes possibly regulated by vista5477[chr1:229692979-229693368]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 229577045 229644103 - NUP133 ENSG00000069248.9 229644103 0.58 0.99 1933 51124
chr1 229652329 229694442 - ABCB10 ENSG00000135776.4 229694442 0.62 0.98 1934 98926
chr1 229728858 229761794 - TAF5L ENSG00000135801.5 229761794 0.7 0.99 1935 31574
chr1 229761981 229795946 + URB2 ENSG00000135763.5 229761981 0.74 0.99 1936 31387
Expression level of Genes
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miRNAs possibly regulated by vista5477[chr1:229692979-229693368]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results