EnhancerDB
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  3. vista54790[chr7:1550412-1550644]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista54790[chr7:1550412-1550644]
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Tissue distribution of vista54790
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Transcription factor that possibly regulate vista54790[chr7:1550412-1550644]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr7 1550418 1550432 GLIS3 JASPAR yes 12470490
chr7 1550418 1550432 GLIS3 JASPAR yes 26011233
chr7 1550420 1550440 RREB1 JASPAR yes 12470491
chr7 1550420 1550440 RREB1 JASPAR yes 26011234
chr7 1550421 1550435 PLAG1 JASPAR yes 12470492
chr7 1550421 1550435 PLAG1 JASPAR yes 26011235
chr7 1550433 1550454 REST JASPAR yes 12470493
chr7 1550433 1550454 REST JASPAR yes 26011236
chr7 1550444 1550456 INSM1 JASPAR yes 12470494
chr7 1550444 1550456 INSM1 JASPAR yes 26011237
chr7 1550449 1550456 SP1 TRANSFAC yes 12470495
chr7 1550449 1550456 SP1 TRANSFAC yes 26011238
chr7 1550451 1550456 SP1 TRANSFAC yes 12470496
chr7 1550451 1550456 SP1 TRANSFAC yes 26011239
chr7 1550464 1550469 SP1 TRANSFAC yes 12470497
chr7 1550464 1550469 SP1 TRANSFAC yes 26011240
chr7 1550467 1550477 SP1 JASPAR yes 12470498
chr7 1550467 1550477 SP1 JASPAR yes 26011241
chr7 1550467 1550488 ZNF263 JASPAR yes 12470499
chr7 1550467 1550488 ZNF263 JASPAR yes 26011242
chr7 1550468 1550478 SP1 JASPAR yes 12470500
chr7 1550468 1550478 SP1 JASPAR yes 26011243
chr7 1550468 1550489 ZNF263 JASPAR yes 12470501
chr7 1550468 1550489 ZNF263 JASPAR yes 26011244
chr7 1550469 1550473 LFA1 TRANSFAC yes 12470502
chr7 1550469 1550473 LFA1 TRANSFAC yes 26011245
chr7 1550469 1550481 INSM1 JASPAR yes 12470503
chr7 1550469 1550481 INSM1 JASPAR yes 26011246
chr7 1550475 1550490 HNF4G JASPAR yes 12470504
chr7 1550475 1550490 HNF4G JASPAR yes 26011247
chr7 1550476 1550491 HNF4A JASPAR yes 12470505
chr7 1550476 1550491 HNF4A JASPAR yes 26011248
chr7 1550493 1550508 TFAP2A JASPAR yes 12470506
chr7 1550493 1550508 TFAP2C JASPAR yes 12470507
chr7 1550493 1550508 TFAP2A JASPAR yes 26011249
chr7 1550493 1550508 TFAP2C JASPAR yes 26011250
chr7 1550496 1550508 TFAP2A JASPAR yes 12470508
chr7 1550496 1550508 TFAP2B JASPAR yes 12470509
chr7 1550496 1550508 TFAP2A JASPAR yes 26011251
chr7 1550496 1550508 TFAP2B JASPAR yes 26011252
chr7 1550497 1550506 TFAP2A JASPAR yes 12470510
chr7 1550497 1550506 TFAP2A JASPAR yes 26011253
chr7 1550502 1550523 ZNF263 JASPAR yes 12470511
chr7 1550502 1550523 ZNF263 JASPAR yes 26011254
chr7 1550517 1550522 SP1 TRANSFAC yes 12470512
chr7 1550517 1550522 SP1 TRANSFAC yes 26011255
chr7 1550520 1550524 LFA1 TRANSFAC yes 12470513
chr7 1550520 1550524 LFA1 TRANSFAC yes 26011256
chr7 1550527 1550539 NHLH1 JASPAR yes 12470514
chr7 1550527 1550539 NHLH1 JASPAR yes 26011257
chr7 1550528 1550538 NHLH1 JASPAR yes 12470515
chr7 1550528 1550538 NHLH1 JASPAR yes 26011258
chr7 1550532 1550547 RUNX2 JASPAR yes 12470516
chr7 1550532 1550547 RUNX2 JASPAR yes 26011259
chr7 1550537 1550546 RUNX2 JASPAR yes 12470517
chr7 1550537 1550546 RUNX2 JASPAR yes 26011260
chr7 1550538 1550553 MYBL2 JASPAR yes 12470518
chr7 1550538 1550553 MYBL2 JASPAR yes 26011261
chr7 1550545 1550548 MYB TRANSFAC yes 12470519
chr7 1550545 1550548 MYB TRANSFAC yes 26011262
chr7 1550549 1550561 HES7 JASPAR yes 12470520
chr7 1550549 1550561 HES7 JASPAR yes 26011263
chr7 1550555 1550566 STAT1 JASPAR yes 12470521
chr7 1550555 1550566 STAT3 JASPAR yes 12470522
chr7 1550555 1550566 STAT1 JASPAR yes 26011264
chr7 1550555 1550566 STAT3 JASPAR yes 26011265
chr7 1550555 1550568 ELF1 JASPAR yes 12470523
chr7 1550555 1550568 ELF1 JASPAR yes 26011266
chr7 1550558 1550565 ETS1 TRANSFAC yes 12470524
chr7 1550558 1550565 ETS1 TRANSFAC yes 26011267
chr7 1550558 1550569 FLI1 JASPAR yes 12470525
chr7 1550558 1550569 FLI1 JASPAR yes 26011268
chr7 1550563 1550575 NHLH1 JASPAR yes 12470526
chr7 1550563 1550575 NHLH1 JASPAR yes 26011269
chr7 1550564 1550574 NHLH1 JASPAR yes 12470527
chr7 1550564 1550574 NHLH1 JASPAR yes 26011270
chr7 1550616 1550624 EHF JASPAR yes 12470528
chr7 1550616 1550624 EHF JASPAR yes 26011271
SNP sites on vista54790[chr7:1550412-1550644]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr7 1550455 rs11981930 C T
INSM1 SP1
9573203
chr7 1550477 rs528857885 G A
HNF4A HNF4G INSM1 SP1 ZNF263
9573204
chr7 1550490 rs188457067 C T
HNF4A HNF4G
9573205
chr7 1550496 rs150634470 G A
TFAP2A TFAP2B TFAP2C
9573206
chr7 1550502 rs551554186 G A
TFAP2A TFAP2B TFAP2C ZNF263
9573207
chr7 1550555 rs374757744 C T
ELF1 HES7 STAT1 STAT3
9573208
chr7 1550589 rs547739320 C T no 9573209
chr7 1550601 rs536205042 C T no 9573210
Genes possibly regulated by vista54790[chr7:1550412-1550644]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr7 1468101 1499138 - MICALL2 ENSG00000164877.14 1499138 0.84 1.0 7162 48726
chr7 1509913 1545489 - INTS1 ENSG00000164880.11 1545489 0.78 1.0 7163 95077
chr7 1570350 1582679 + MAFK ENSG00000198517.5 1570350 0.67 1.0 7164 80294
chr7 1581871 1600457 - TMEM184A ENSG00000164855.11 1600457 0.89 1.0 7165 50187
chr7 1606966 1610641 - PSMG3 ENSG00000157778.4 1610641 0.78 0.99 7166 40003
Expression level of Genes
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miRNAs possibly regulated by vista54790[chr7:1550412-1550644]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results