EnhancerDB
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  3. vista5480[chr1:229896669-229897041]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5480[chr1:229896669-229897041]
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Tissue distribution of vista5480
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Transcription factor that possibly regulate vista5480[chr1:229896669-229897041]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 229896689 229896694 H4TF1 TRANSFAC yes 36000994
chr1 229896689 229896694 H4TF1 TRANSFAC yes 118476999
chr1 229896723 229896728 ETS2 TRANSFAC yes 36000995
chr1 229896723 229896728 ETS2 TRANSFAC yes 118477000
chr1 229896788 229896792 NFE TRANSFAC yes 36000996
chr1 229896788 229896792 NFE TRANSFAC yes 118477001
chr1 229896808 229896825 RXRA JASPAR yes 36000997
chr1 229896808 229896825 RXRA JASPAR yes 118477002
chr1 229896823 229896837 GATA2 JASPAR yes 36000998
chr1 229896823 229896837 GATA2 JASPAR yes 118477003
chr1 229896825 229896831 GATA1 TRANSFAC yes 36000999
chr1 229896825 229896831 GATA1 TRANSFAC yes 118477004
chr1 229896836 229896856 PPARG JASPAR yes 36001000
chr1 229896836 229896856 PPARG JASPAR yes 118477005
chr1 229896878 229896884 NFE2 TRANSFAC yes 36001001
chr1 229896878 229896884 NFE2 TRANSFAC yes 118477006
chr1 229896888 229896894 NFE2 TRANSFAC yes 36001002
chr1 229896888 229896894 NFE2 TRANSFAC yes 118477007
chr1 229896898 229896907 ZEB1 JASPAR yes 36001003
chr1 229896898 229896907 ZEB1 JASPAR yes 118477008
chr1 229896920 229896925 TFAP2A TRANSFAC yes 36001004
chr1 229896920 229896925 TFAP2A TRANSFAC yes 118477009
chr1 229896920 229896926 MZF1 JASPAR yes 36001005
chr1 229896920 229896926 MZF1 JASPAR yes 118477010
chr1 229896951 229896972 ZNF263 JASPAR yes 36001006
chr1 229896951 229896972 ZNF263 JASPAR yes 118477011
chr1 229896954 229896975 ZNF263 JASPAR yes 36001007
chr1 229896954 229896975 ZNF263 JASPAR yes 118477012
chr1 229896960 229896966 YY1 JASPAR yes 36001008
chr1 229896960 229896966 YY1 JASPAR yes 118477013
chr1 229896961 229896982 ZNF263 JASPAR yes 36001009
chr1 229896961 229896982 ZNF263 JASPAR yes 118477014
chr1 229896969 229896984 NR2C2 JASPAR yes 36001010
chr1 229896969 229896984 NR2C2 JASPAR yes 118477015
chr1 229896970 229896985 PRDM1 JASPAR yes 36001011
chr1 229896970 229896985 PRDM1 JASPAR yes 118477016
chr1 229896978 229896999 ZNF263 JASPAR yes 36001012
chr1 229896978 229896999 ZNF263 JASPAR yes 118477017
chr1 229896987 229897008 ZNF263 JASPAR yes 36001013
chr1 229896987 229897008 ZNF263 JASPAR yes 118477018
chr1 229896992 229897003 FLI1 JASPAR yes 36001014
chr1 229896992 229897003 FLI1 JASPAR yes 118477019
chr1 229896996 229897003 SPIB JASPAR yes 36001015
chr1 229896996 229897003 SPIB JASPAR yes 118477020
chr1 229897028 229897031 MYB TRANSFAC yes 36001016
chr1 229897028 229897031 MYB TRANSFAC yes 118477021
SNP sites on vista5480[chr1:229896669-229897041]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 229896754 rs565608959 T C no 1012049
chr1 229896913 rs369449276 C T no 1012050
chr1 229896938 rs6657689 T C no 1012051
chr1 229896988 rs548327021 T C
ZNF263
1012052
chr1 229897015 rs542273956 G A no 1012053
Genes possibly regulated by vista5480[chr1:229896669-229897041]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista5480[chr1:229896669-229897041]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results