EnhancerDB
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  2. Enhancers
  3. vista54809[chr7:1959266-1959659]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista54809[chr7:1959266-1959659]
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Tissue distribution of vista54809
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Transcription factor that possibly regulate vista54809[chr7:1959266-1959659]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr7 1959269 1959509 USF1 UCSC Txn Factor no Conserved 108542967
chr7 1959265 1959276 FOXA1 JASPAR yes 12496303
chr7 1959265 1959276 FOXA1 JASPAR yes 26012109
chr7 1959295 1959310 FOXP1 JASPAR yes 12496304
chr7 1959295 1959310 FOXP1 JASPAR yes 26012110
chr7 1959298 1959309 FOXP2 JASPAR yes 12496305
chr7 1959298 1959309 FOXP2 JASPAR yes 26012111
chr7 1959298 1959310 FOXI1 JASPAR yes 12496306
chr7 1959298 1959310 FOXI1 JASPAR yes 26012112
chr7 1959299 1959303 TEAD2 TRANSFAC yes 12496307
chr7 1959299 1959303 TEAD2 TRANSFAC yes 26012113
chr7 1959299 1959304 TBP TRANSFAC yes 12496308
chr7 1959299 1959304 TBP TRANSFAC yes 26012114
chr7 1959300 1959308 FOXG1 JASPAR yes 12496309
chr7 1959300 1959308 FOXG1 JASPAR yes 26012115
chr7 1959302 1959308 HiNF-A TRANSFAC yes 12496310
chr7 1959302 1959308 HiNF-A TRANSFAC yes 26012116
chr7 1959306 1959322 GLIS1 JASPAR yes 12496311
chr7 1959306 1959322 GLIS1 JASPAR yes 26012117
chr7 1959307 1959321 GLIS3 JASPAR yes 12496312
chr7 1959307 1959321 GLIS3 JASPAR yes 26012118
chr7 1959317 1959328 ESRRB JASPAR yes 12496313
chr7 1959317 1959328 ESRRB JASPAR yes 26012119
chr7 1959326 1959331 NFY TRANSFAC yes 12496314
chr7 1959326 1959331 NFY TRANSFAC yes 26012120
chr7 1959336 1959346 MAX JASPAR yes 12496315
chr7 1959336 1959346 MAX JASPAR yes 26012121
chr7 1959336 1959347 USF2 JASPAR yes 12496316
chr7 1959336 1959347 USF2 JASPAR yes 26012122
chr7 1959336 1959348 PKNOX1 JASPAR yes 12496317
chr7 1959336 1959348 PKNOX2 JASPAR yes 12496318
chr7 1959336 1959348 TGIF2 JASPAR yes 12496319
chr7 1959336 1959348 PKNOX1 JASPAR yes 26012123
chr7 1959336 1959348 PKNOX2 JASPAR yes 26012124
chr7 1959336 1959348 TGIF2 JASPAR yes 26012125
chr7 1959358 1959375 RARA JASPAR yes 12496320
chr7 1959358 1959375 RARA JASPAR yes 26012126
chr7 1959366 1959377 ESRRA JASPAR yes 12496321
chr7 1959366 1959377 ESRRB JASPAR yes 12496322
chr7 1959366 1959377 ESRRA JASPAR yes 26012127
chr7 1959366 1959377 ESRRB JASPAR yes 26012128
chr7 1959366 1959379 NR2F1 JASPAR yes 12496323
chr7 1959366 1959379 NR2F1 JASPAR yes 26012129
chr7 1959368 1959376 NR4A2 JASPAR yes 12496324
chr7 1959368 1959376 NR4A2 JASPAR yes 26012130
chr7 1959370 1959374 ESR1 TRANSFAC yes 12496325
chr7 1959370 1959374 ESR1 TRANSFAC yes 26012131
chr7 1959370 1959380 MAX JASPAR yes 12496326
chr7 1959370 1959380 MAX JASPAR yes 26012132
chr7 1959370 1959381 USF1 JASPAR yes 12496327
chr7 1959370 1959381 USF2 JASPAR yes 12496328
chr7 1959370 1959381 USF1 JASPAR yes 26012133
chr7 1959370 1959381 USF2 JASPAR yes 26012134
chr7 1959371 1959381 TFEB JASPAR yes 12496329
chr7 1959371 1959381 TFEC JASPAR yes 12496330
chr7 1959371 1959381 TFEB JASPAR yes 26012135
chr7 1959371 1959381 TFEC JASPAR yes 26012136
chr7 1959402 1959417 HNF4A JASPAR yes 12496331
chr7 1959402 1959417 HNF4A JASPAR yes 26012137
chr7 1959403 1959417 TLX1 JASPAR yes 12496332
chr7 1959403 1959417 TLX1 JASPAR yes 26012138
chr7 1959414 1959432 MAFF JASPAR yes 12496333
chr7 1959414 1959432 MAFF JASPAR yes 26012139
chr7 1959416 1959427 NRL JASPAR yes 12496334
chr7 1959416 1959427 NRL JASPAR yes 26012140
chr7 1959416 1959431 MAFK JASPAR yes 12496335
chr7 1959416 1959431 MAFK JASPAR yes 26012141
chr7 1959417 1959427 MSC JASPAR yes 12496336
chr7 1959417 1959427 TFAP4 JASPAR yes 12496337
chr7 1959417 1959427 MSC JASPAR yes 26012142
chr7 1959417 1959427 TFAP4 JASPAR yes 26012143
chr7 1959439 1959445 SP1 TRANSFAC yes 12496338
chr7 1959439 1959445 SP1 TRANSFAC yes 26012144
chr7 1959439 1959449 SP1 JASPAR yes 12496339
chr7 1959439 1959449 SP1 JASPAR yes 26012145
chr7 1959449 1959459 SREBF2 JASPAR yes 12496340
chr7 1959449 1959459 SREBF2 JASPAR yes 26012146
chr7 1959465 1959471 TCF4 TRANSFAC yes 12496341
chr7 1959465 1959471 TCF4 TRANSFAC yes 26012147
chr7 1959473 1959488 STAT2 JASPAR yes 12496342
chr7 1959473 1959488 STAT2 JASPAR yes 26012148
chr7 1959485 1959500 LEF1 JASPAR yes 12496343
chr7 1959485 1959500 LEF1 JASPAR yes 26012149
chr7 1959486 1959489 MYB TRANSFAC yes 12496344
chr7 1959486 1959489 MYB TRANSFAC yes 26012150
chr7 1959489 1959495 LEF1 TRANSFAC yes 12496345
chr7 1959489 1959495 TCF4 TRANSFAC yes 12496346
chr7 1959489 1959495 LEF1 TRANSFAC yes 26012151
chr7 1959489 1959495 TCF4 TRANSFAC yes 26012152
chr7 1959494 1959515 IRF1 JASPAR yes 12496347
chr7 1959494 1959515 IRF1 JASPAR yes 26012153
chr7 1959497 1959511 IRF7 JASPAR yes 12496348
chr7 1959497 1959511 IRF7 JASPAR yes 26012154
chr7 1959498 1959512 STAT1 JASPAR yes 12496349
chr7 1959498 1959512 STAT1 JASPAR yes 26012155
chr7 1959498 1959513 STAT2 JASPAR yes 12496350
chr7 1959498 1959513 STAT2 JASPAR yes 26012156
chr7 1959518 1959529 EBF1 JASPAR yes 12496351
chr7 1959518 1959529 EBF1 JASPAR yes 26012157
chr7 1959522 1959527 TFAP2A TRANSFAC yes 12496352
chr7 1959522 1959527 TFAP2A TRANSFAC yes 26012158
chr7 1959522 1959528 MZF1 JASPAR yes 12496353
chr7 1959522 1959528 MZF1 JASPAR yes 26012159
chr7 1959524 1959530 MAZ TRANSFAC yes 12496354
chr7 1959524 1959530 MAZ TRANSFAC yes 26012160
chr7 1959524 1959535 E2F6 JASPAR yes 12496355
chr7 1959524 1959535 E2F6 JASPAR yes 26012161
chr7 1959536 1959551 HNF4G JASPAR yes 12496356
chr7 1959536 1959551 HNF4G JASPAR yes 26012162
chr7 1959540 1959546 TCF4 TRANSFAC yes 12496357
chr7 1959540 1959546 TCF4 TRANSFAC yes 26012163
chr7 1959561 1959567 SP1 TRANSFAC yes 12496358
chr7 1959561 1959567 SP1 TRANSFAC yes 26012164
chr7 1959562 1959567 SP1 TRANSFAC yes 12496359
chr7 1959562 1959567 SP1 TRANSFAC yes 26012165
chr7 1959562 1959582 ESR1 JASPAR yes 12496360
chr7 1959562 1959582 ESR1 JASPAR yes 26012166
chr7 1959574 1959595 ZNF263 JASPAR yes 12496361
chr7 1959574 1959595 ZNF263 JASPAR yes 26012167
chr7 1959585 1959591 SP1 TRANSFAC yes 12496362
chr7 1959585 1959591 SP1 TRANSFAC yes 26012168
chr7 1959585 1959595 SP1 JASPAR yes 12496363
chr7 1959585 1959595 SP1 JASPAR yes 26012169
chr7 1959620 1959631 FOXA1 JASPAR yes 12496364
chr7 1959620 1959631 FOXA1 JASPAR yes 26012170
chr7 1959621 1959630 NFIX JASPAR yes 12496365
chr7 1959621 1959630 NFIX JASPAR yes 26012171
chr7 1959621 1959631 NFIA JASPAR yes 12496366
chr7 1959621 1959631 NFIA JASPAR yes 26012172
chr7 1959623 1959629 NFIC JASPAR yes 12496367
chr7 1959623 1959629 NFIC JASPAR yes 26012173
chr7 1959647 1959651 H4TF2 TRANSFAC yes 12496368
chr7 1959647 1959651 H4TF2 TRANSFAC yes 26012174
chr7 1959649 1959655 MZF1 JASPAR yes 12496369
chr7 1959649 1959655 MZF1 JASPAR yes 26012175
SNP sites on vista54809[chr7:1959266-1959659]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr7 1959268 rs186872801 G A,C
FOXA1
9577371
chr7 1959634 rs137944087 TCCAGTGACACGGAGGTCC T no 9577372
chr7 1959634 rs56023182 TCCAGTGACACGGAGGTCC T no 9577373
Genes possibly regulated by vista54809[chr7:1959266-1959659]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr7 1878222 1889567 + AC110781.3 ENSG00000176349.7 1878222 0.89 1.0 7170 18956
Expression level of Genes
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miRNAs possibly regulated by vista54809[chr7:1959266-1959659]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr7 1883825 1883845 - hsa-miR-4655-3p MIMAT0019722 2272546 5.908608203383876e-05 0.0 0.0 1409
Expression level of miRNAs
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