EnhancerDB
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  3. vista54812[chr7:1965570-1966023]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista54812[chr7:1965570-1966023]
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Tissue distribution of vista54812
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Transcription factor that possibly regulate vista54812[chr7:1965570-1966023]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr7 1965739 1965994 RUNX3 UCSC Txn Factor no Conserved 108542969
chr7 1965964 1966236 MAFK UCSC Txn Factor no Conserved 108542970
chr7 1965559 1965579 RREB1 JASPAR yes 12497135
chr7 1965559 1965579 RREB1 JASPAR yes 26012290
chr7 1965577 1965591 ONECUT2 JASPAR yes 12497136
chr7 1965577 1965591 ONECUT3 JASPAR yes 12497137
chr7 1965577 1965591 ONECUT2 JASPAR yes 26012291
chr7 1965577 1965591 ONECUT3 JASPAR yes 26012292
chr7 1965577 1965598 IRF1 JASPAR yes 12497138
chr7 1965577 1965598 IRF1 JASPAR yes 26012293
chr7 1965585 1965600 IRF9 JASPAR yes 12497139
chr7 1965585 1965600 IRF9 JASPAR yes 26012294
chr7 1965586 1965600 IRF7 JASPAR yes 12497140
chr7 1965586 1965600 IRF7 JASPAR yes 26012295
chr7 1965588 1965600 IRF1 JASPAR yes 12497141
chr7 1965588 1965600 IRF1 JASPAR yes 26012296
chr7 1965594 1965608 RORA JASPAR yes 12497142
chr7 1965594 1965608 RORA JASPAR yes 26012297
chr7 1965646 1965649 MYB TRANSFAC yes 12497143
chr7 1965646 1965649 MYB TRANSFAC yes 26012298
chr7 1965649 1965664 MEF2C JASPAR yes 12497144
chr7 1965649 1965664 MEF2C JASPAR yes 26012299
chr7 1965650 1965671 IRF1 JASPAR yes 12497145
chr7 1965650 1965671 IRF1 JASPAR yes 26012300
chr7 1965652 1965673 IRF1 JASPAR yes 12497146
chr7 1965652 1965673 IRF1 JASPAR yes 26012301
chr7 1965656 1965671 FOXP1 JASPAR yes 12497147
chr7 1965656 1965671 FOXP1 JASPAR yes 26012302
chr7 1965656 1965677 IRF1 JASPAR yes 12497148
chr7 1965656 1965677 IRF1 JASPAR yes 26012303
chr7 1965657 1965678 IRF1 JASPAR yes 12497149
chr7 1965657 1965678 IRF1 JASPAR yes 26012304
chr7 1965658 1965673 FOXP1 JASPAR yes 12497150
chr7 1965658 1965673 LEF1 JASPAR yes 12497151
chr7 1965658 1965673 FOXP1 JASPAR yes 26012305
chr7 1965658 1965673 LEF1 JASPAR yes 26012306
chr7 1965658 1965679 IRF1 JASPAR yes 12497152
chr7 1965658 1965679 IRF1 JASPAR yes 26012307
chr7 1965659 1965680 IRF1 JASPAR yes 12497153
chr7 1965659 1965680 IRF1 JASPAR yes 26012308
chr7 1965663 1965678 FOXP1 JASPAR yes 12497154
chr7 1965663 1965678 FOXP1 JASPAR yes 26012309
chr7 1965663 1965684 IRF1 JASPAR yes 12497155
chr7 1965663 1965684 IRF1 JASPAR yes 26012310
chr7 1965664 1965679 FOXP1 JASPAR yes 12497156
chr7 1965664 1965679 FOXP1 JASPAR yes 26012311
chr7 1965665 1965686 IRF1 JASPAR yes 12497157
chr7 1965665 1965686 IRF1 JASPAR yes 26012312
chr7 1965667 1965682 STAT2 JASPAR yes 12497158
chr7 1965667 1965682 STAT2 JASPAR yes 26012313
chr7 1965691 1965705 SPIC JASPAR yes 12497159
chr7 1965691 1965705 SPIC JASPAR yes 26012314
chr7 1965696 1965704 EHF JASPAR yes 12497160
chr7 1965696 1965704 EHF JASPAR yes 26012315
chr7 1965700 1965705 ETS2 TRANSFAC yes 12497161
chr7 1965700 1965705 ETS2 TRANSFAC yes 26012316
chr7 1965700 1965708 EHF JASPAR yes 12497162
chr7 1965700 1965708 EHF JASPAR yes 26012317
chr7 1965737 1965756 PAX5 JASPAR yes 12497163
chr7 1965737 1965756 PAX5 JASPAR yes 26012318
chr7 1965778 1965782 YY1 TRANSFAC yes 12497164
chr7 1965778 1965782 YY1 TRANSFAC yes 26012319
chr7 1965792 1965796 TEAD2 TRANSFAC yes 12497165
chr7 1965792 1965796 TEAD2 TRANSFAC yes 26012320
chr7 1965798 1965808 TFCP2 JASPAR yes 12497166
chr7 1965798 1965808 TFCP2 JASPAR yes 26012321
chr7 1965809 1965824 FOXP1 JASPAR yes 12497167
chr7 1965809 1965824 FOXP1 JASPAR yes 26012322
chr7 1965810 1965821 HOXA10 JASPAR yes 12497168
chr7 1965810 1965821 HOXA10 JASPAR yes 26012323
chr7 1965811 1965820 CDX1 JASPAR yes 12497169
chr7 1965811 1965820 CDX1 JASPAR yes 26012324
chr7 1965811 1965821 HOXA13 JASPAR yes 12497170
chr7 1965811 1965821 HOXB13 JASPAR yes 12497171
chr7 1965811 1965821 HOXD13 JASPAR yes 12497172
chr7 1965811 1965821 HOXA13 JASPAR yes 26012325
chr7 1965811 1965821 HOXB13 JASPAR yes 26012326
chr7 1965811 1965821 HOXD13 JASPAR yes 26012327
chr7 1965815 1965821 TBP TRANSFAC yes 12497173
chr7 1965815 1965821 TBP TRANSFAC yes 26012328
chr7 1965834 1965844 TEAD1 JASPAR yes 12497174
chr7 1965834 1965844 TEAD4 JASPAR yes 12497175
chr7 1965834 1965844 TEAD1 JASPAR yes 26012329
chr7 1965834 1965844 TEAD4 JASPAR yes 26012330
chr7 1965849 1965859 TFAP4 JASPAR yes 12497176
chr7 1965849 1965859 TFAP4 JASPAR yes 26012331
chr7 1965855 1965869 TCF7L2 JASPAR yes 12497177
chr7 1965855 1965869 TCF7L2 JASPAR yes 26012332
chr7 1965855 1965870 LEF1 JASPAR yes 12497178
chr7 1965855 1965870 LEF1 JASPAR yes 26012333
chr7 1965859 1965865 TCF4 TRANSFAC yes 12497179
chr7 1965859 1965865 TCF4 TRANSFAC yes 26012334
chr7 1965872 1965887 STAT1 JASPAR yes 12497180
chr7 1965872 1965887 STAT1 JASPAR yes 26012335
chr7 1965874 1965885 STAT1 JASPAR yes 12497181
chr7 1965874 1965885 STAT1 JASPAR yes 26012336
chr7 1965889 1965904 HSF1 JASPAR yes 12497182
chr7 1965889 1965904 HSF1 JASPAR yes 26012337
chr7 1965899 1965914 RUNX2 JASPAR yes 12497183
chr7 1965899 1965914 RUNX2 JASPAR yes 26012338
chr7 1965900 1965909 RUNX2 JASPAR yes 12497184
chr7 1965900 1965909 RUNX2 JASPAR yes 26012339
chr7 1965900 1965910 RUNX3 JASPAR yes 12497185
chr7 1965900 1965910 RUNX3 JASPAR yes 26012340
chr7 1965900 1965911 RUNX1 JASPAR yes 12497186
chr7 1965900 1965911 RUNX1 JASPAR yes 26012341
chr7 1965900 1965916 ZNF143 JASPAR yes 12497187
chr7 1965900 1965916 ZNF143 JASPAR yes 26012342
chr7 1965917 1965929 TAL1 JASPAR yes 12497188
chr7 1965917 1965929 TAL1 JASPAR yes 26012343
chr7 1965949 1965953 YY1 TRANSFAC yes 12497189
chr7 1965949 1965953 YY1 TRANSFAC yes 26012344
chr7 1965961 1965964 MYB TRANSFAC yes 12497190
chr7 1965961 1965964 MYB TRANSFAC yes 26012345
chr7 1965966 1965970 H1TF2 TRANSFAC yes 12497191
chr7 1965966 1965970 NFE TRANSFAC yes 12497192
chr7 1965966 1965970 SRF TRANSFAC yes 12497193
chr7 1965966 1965970 H1TF2 TRANSFAC yes 26012346
chr7 1965966 1965970 NFE TRANSFAC yes 26012347
chr7 1965966 1965970 SRF TRANSFAC yes 26012348
chr7 1965975 1965979 TEAD2 TRANSFAC yes 12497194
chr7 1965975 1965979 TEAD2 TRANSFAC yes 26012349
chr7 1965988 1966005 RARA JASPAR yes 12497195
chr7 1965988 1966005 RARA JASPAR yes 26012350
chr7 1965989 1966003 TCF7L2 JASPAR yes 12497196
chr7 1965989 1966003 TCF7L2 JASPAR yes 26012351
chr7 1965989 1966004 LEF1 JASPAR yes 12497197
chr7 1965989 1966004 LEF1 JASPAR yes 26012352
chr7 1966011 1966015 H1TF2 TRANSFAC yes 12497198
chr7 1966011 1966015 NFE TRANSFAC yes 12497199
chr7 1966011 1966015 SRF TRANSFAC yes 12497200
chr7 1966011 1966015 H1TF2 TRANSFAC yes 26012353
chr7 1966011 1966015 NFE TRANSFAC yes 26012354
chr7 1966011 1966015 SRF TRANSFAC yes 26012355
SNP sites on vista54812[chr7:1965570-1966023]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr7 1965724 rs143734079 C T no 9577500
chr7 1965776 rs113539793 A G
RUNX3
9577501
chr7 1965817 rs148073777 A T
CDX1 FOXP1 HOXA10 HOXA13 HOXB13 HOXD13 RUNX3 TBP
9577502
chr7 1965889 rs116086386 T G
HSF1 RUNX3
9577503
Genes possibly regulated by vista54812[chr7:1965570-1966023]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr7 1878222 1889567 + AC110781.3 ENSG00000176349.7 1878222 0.89 1.0 7170 12652
Expression level of Genes
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miRNAs possibly regulated by vista54812[chr7:1965570-1966023]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr7 1883825 1883845 - hsa-miR-4655-3p MIMAT0019722 2272546 6.030606141112924e-05 0.0 0.0 1409
Expression level of miRNAs
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